Equivalence class NR_4.0_94764.1 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 5FJC|1|A (rep) | SAM riboswitch | SAM-I RIBOSWITCH | Caldanaerobacter subterraneus | Bacteria | RF00162 | SAM-I riboswitch bearing the H. marismortui Kt-7 variant C-2bU | X-ray diffraction | 1.71 | 2016-05-25 |
| 2 | 4B5R|1|A | SAM riboswitch | SAM-I RIBOSWITCH | Caldanaerobacter subterraneus | Bacteria | RF00162 | SAM-I riboswitch bearing the H. marismortui K-t-7 | X-ray diffraction | 2.95 | 2013-01-30 |
Release history
| Release | 6.0 |
|---|---|
| Date | 2017-04-04 |
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
|---|---|---|---|---|---|
| NR_4.0_94764.1 | NR_4.0_06154.1 | 6.0 | (1) 5FJC|1|A | (1) 4B5R|1|A | (11) 5FK5|1|A, 5FKF|1|A, 5FK4|1|A, 5FKE|1|A, 5FK3|1|A, 5FKD|1|A, 5FK2|1|A, 5FKH|1|A, 5FK6|1|A, 5FK1|1|A, 5FKG|1|A |
| NR_4.0_94764.1 | NR_4.0_61556.1 | 6.0 | (1) 4B5R|1|A | (1) 5FJC|1|A | (0) |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length | NAKB_NA_annotation | NAKB_protein_annotation |
|---|---|---|---|---|---|---|---|
| 1 | 5FJC|1|A | Title: SAM-I riboswitch bearing the H. marismortui Kt-7 variant C-2bU | X-RAY DIFFRACTION | 1.71 | 96 | ||
| 2 | 4B5R|1|A | Title: SAM-I riboswitch bearing the H. marismortui K-t-7 | X-RAY DIFFRACTION | 2.95 | 94 |
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