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Equivalence class NR_4.0_91371.1 Obsolete

#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. ÅDate
12GDI|1|Y (rep)TPP riboswitch (THI element)TPP riboswitchRF00059Crystal structure of thiamine pyrophosphate-specific riboswitch in complex with thiamine pyrophosphateX-ray diffraction2.052006-07-04
22GDI|1|XTPP riboswitch (THI element)TPP riboswitchRF00059Crystal structure of thiamine pyrophosphate-specific riboswitch in complex with thiamine pyrophosphateX-ray diffraction2.052006-07-04

Release history

Release6.0
Date2017-04-04

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent
NR_4.0_91371.1NR_4.0_84769.16.0(2) 2GDI|1|X, 2GDI|1|Y(0) (12) 2HOL|1|A, 4NYA|1|B, 4NYC|1|A, 2HOO|1|A, 4NYG|1|A, 4NYA|1|A, 2HOK|1|A, 4NYB|1|A, 2HOM|1|A, 4NYD|1|A, 2HOP|1|A, 2HOJ|1|A

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child
NR_4.0_91371.1NR_4.0_81824.17.0(2) 2GDI|1|X, 2GDI|1|Y(0) (12) 4NYD|1|A, 4NYC|1|A, 4NYB|1|A, 4NYA|1|B, 4NYG|1|A, 4NYA|1|A, 2HOP|1|A, 2HOO|1|A, 2HOM|1|A, 2HOL|1|A, 2HOK|1|A, 2HOJ|1|A

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLengthNAKB_NA_annotationNAKB_protein_annotation
12GDI|1|YTitle: Crystal structure of thiamine pyrophosphate-specific riboswitch in complex with thiamine pyrophosphateX-RAY DIFFRACTION2.0578
22GDI|1|XTitle: Crystal structure of thiamine pyrophosphate-specific riboswitch in complex with thiamine pyrophosphateX-RAY DIFFRACTION2.0578

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