Equivalence class NR_4.0_82047.1 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 1XPU|1|M (rep) | 5'-R(*CP*UP*CP*UP*CP*UP*CP*U)-3' | Structural mechanism of inhibition of the Rho transcription termination factor by the antibiotic 5a-(3-formylphenylsulfanyl)-dihydrobicyclomycin (FPDB) | X-ray diffraction | 3.05 | 2004-11-02 | ||||
| 2 | 1XPU|1|L | 5'-R(*CP*UP*CP*UP*CP*UP*CP*U)-3' | Structural mechanism of inhibition of the Rho transcription termination factor by the antibiotic 5a-(3-formylphenylsulfanyl)-dihydrobicyclomycin (FPDB) | X-ray diffraction | 3.05 | 2004-11-02 | ||||
| 3 | 1XPU|1|K | 5'-R(*CP*UP*CP*UP*CP*UP*CP*U)-3' | Structural mechanism of inhibition of the Rho transcription termination factor by the antibiotic 5a-(3-formylphenylsulfanyl)-dihydrobicyclomycin (FPDB) | X-ray diffraction | 3.05 | 2004-11-02 | ||||
| 4 | 1XPU|1|J | 5'-R(*CP*UP*CP*UP*CP*UP*CP*U)-3' | Structural mechanism of inhibition of the Rho transcription termination factor by the antibiotic 5a-(3-formylphenylsulfanyl)-dihydrobicyclomycin (FPDB) | X-ray diffraction | 3.05 | 2004-11-02 | ||||
| 5 | 1XPU|1|H | 5'-R(*CP*UP*CP*UP*CP*UP*CP*U)-3' | Structural mechanism of inhibition of the Rho transcription termination factor by the antibiotic 5a-(3-formylphenylsulfanyl)-dihydrobicyclomycin (FPDB) | X-ray diffraction | 3.05 | 2004-11-02 | ||||
| 6 | 1XPU|1|G | 5'-R(*CP*UP*CP*UP*CP*UP*CP*U)-3' | Structural mechanism of inhibition of the Rho transcription termination factor by the antibiotic 5a-(3-formylphenylsulfanyl)-dihydrobicyclomycin (FPDB) | X-ray diffraction | 3.05 | 2004-11-02 |
Release history
| Release | 6.0 |
|---|---|
| Date | 2017-04-04 |
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
|---|---|---|---|---|---|
| NR_4.0_82047.1 | NR_4.0_27037.1 | 6.0 | (6) 1XPU|1|J, 1XPU|1|M, 1XPU|1|H, 1XPU|1|L, 1XPU|1|K, 1XPU|1|G | (0) | (12) 1XPO|1|L, 1XPO|1|G, 1XPR|1|M, 1XPR|1|H, 1XPO|1|J, 1XPR|1|G, 1XPR|1|K, 1XPO|1|H, 1XPR|1|J, 1XPO|1|K, 1XPR|1|L, 1XPO|1|M |
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
|---|---|---|---|---|---|
| NR_4.0_82047.1 | NR_4.0_88285.1 | 7.0 | (6) 1XPU|1|H, 1XPU|1|J, 1XPU|1|K, 1XPU|1|M, 1XPU|1|G, 1XPU|1|L | (0) | (12) 1XPO|1|G, 1XPO|1|L, 1XPR|1|J, 1XPR|1|M, 1XPO|1|K, 1XPR|1|H, 1XPR|1|L, 1XPO|1|J, 1XPR|1|G, 1XPR|1|K, 1XPO|1|H, 1XPO|1|M |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length | NAKB_NA_annotation | NAKB_protein_annotation |
|---|---|---|---|---|---|---|---|
| 1 | 1XPU|1|L | Title: Structural mechanism of inhibition of the Rho transcription termination factor by the antibiotic 5a-(3-formylphenylsulfanyl)-dihydrobicyclomycin (FPDB) | X-RAY DIFFRACTION | 3.05 | 2 | ||
| 2 | 1XPU|1|G | Title: Structural mechanism of inhibition of the Rho transcription termination factor by the antibiotic 5a-(3-formylphenylsulfanyl)-dihydrobicyclomycin (FPDB) | X-RAY DIFFRACTION | 3.05 | 2 | ||
| 3 | 1XPU|1|H | Title: Structural mechanism of inhibition of the Rho transcription termination factor by the antibiotic 5a-(3-formylphenylsulfanyl)-dihydrobicyclomycin (FPDB) | X-RAY DIFFRACTION | 3.05 | 2 | ||
| 4 | 1XPU|1|K | Title: Structural mechanism of inhibition of the Rho transcription termination factor by the antibiotic 5a-(3-formylphenylsulfanyl)-dihydrobicyclomycin (FPDB) | X-RAY DIFFRACTION | 3.05 | 2 | ||
| 5 | 1XPU|1|J | Title: Structural mechanism of inhibition of the Rho transcription termination factor by the antibiotic 5a-(3-formylphenylsulfanyl)-dihydrobicyclomycin (FPDB) | X-RAY DIFFRACTION | 3.05 | 2 | ||
| 6 | 1XPU|1|M | Title: Structural mechanism of inhibition of the Rho transcription termination factor by the antibiotic 5a-(3-formylphenylsulfanyl)-dihydrobicyclomycin (FPDB) | X-RAY DIFFRACTION | 3.05 | 2 |
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