Equivalence class NR_4.0_88285.1 Current
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 1XPU|1|G (rep) | 5'-R(*CP*UP*CP*UP*CP*UP*CP*U)-3' | Structural mechanism of inhibition of the Rho transcription termination factor by the antibiotic 5a-(3-formylphenylsulfanyl)-dihydrobicyclomycin (FPDB) | X-ray diffraction | 3.05 | 2004-11-02 | ||||
| 2 | 1XPU|1|L | 5'-R(*CP*UP*CP*UP*CP*UP*CP*U)-3' | Structural mechanism of inhibition of the Rho transcription termination factor by the antibiotic 5a-(3-formylphenylsulfanyl)-dihydrobicyclomycin (FPDB) | X-ray diffraction | 3.05 | 2004-11-02 | ||||
| 3 | 1XPR|1|L | 5'-R(*CP*UP*CP*UP*CP*UP*CP*U)-3' | Structural mechanism of inhibition of the Rho transcription termination factor by the antibiotic 5a-formylbicyclomycin (FB) | X-ray diffraction | 3.15 | 2004-11-02 | ||||
| 4 | 1XPU|1|H | 5'-R(*CP*UP*CP*UP*CP*UP*CP*U)-3' | Structural mechanism of inhibition of the Rho transcription termination factor by the antibiotic 5a-(3-formylphenylsulfanyl)-dihydrobicyclomycin (FPDB) | X-ray diffraction | 3.05 | 2004-11-02 | ||||
| 5 | 1XPO|1|K | 5'-R(*CP*UP*CP*UP*CP*UP*CP*U)-3' | Structural mechanism of inhibition of the Rho transcription termination factor by the antibiotic bicyclomycin | X-ray diffraction | 3.15 | 2005-02-08 | ||||
| 6 | 1XPO|1|J | 5'-R(*CP*UP*CP*UP*CP*UP*CP*U)-3' | Structural mechanism of inhibition of the Rho transcription termination factor by the antibiotic bicyclomycin | X-ray diffraction | 3.15 | 2005-02-08 | ||||
| 7 | 1XPU|1|J | 5'-R(*CP*UP*CP*UP*CP*UP*CP*U)-3' | Structural mechanism of inhibition of the Rho transcription termination factor by the antibiotic 5a-(3-formylphenylsulfanyl)-dihydrobicyclomycin (FPDB) | X-ray diffraction | 3.05 | 2004-11-02 | ||||
| 8 | 1XPO|1|H | 5'-R(*CP*UP*CP*UP*CP*UP*CP*U)-3' | Structural mechanism of inhibition of the Rho transcription termination factor by the antibiotic bicyclomycin | X-ray diffraction | 3.15 | 2005-02-08 | ||||
| 9 | 1XPR|1|J | 5'-R(*CP*UP*CP*UP*CP*UP*CP*U)-3' | Structural mechanism of inhibition of the Rho transcription termination factor by the antibiotic 5a-formylbicyclomycin (FB) | X-ray diffraction | 3.15 | 2004-11-02 | ||||
| 10 | 1XPU|1|K | 5'-R(*CP*UP*CP*UP*CP*UP*CP*U)-3' | Structural mechanism of inhibition of the Rho transcription termination factor by the antibiotic 5a-(3-formylphenylsulfanyl)-dihydrobicyclomycin (FPDB) | X-ray diffraction | 3.05 | 2004-11-02 | ||||
| 11 | 1XPR|1|K | 5'-R(*CP*UP*CP*UP*CP*UP*CP*U)-3' | Structural mechanism of inhibition of the Rho transcription termination factor by the antibiotic 5a-formylbicyclomycin (FB) | X-ray diffraction | 3.15 | 2004-11-02 | ||||
| 12 | 1XPO|1|M | 5'-R(*CP*UP*CP*UP*CP*UP*CP*U)-3' | Structural mechanism of inhibition of the Rho transcription termination factor by the antibiotic bicyclomycin | X-ray diffraction | 3.15 | 2005-02-08 | ||||
| 13 | 1XPO|1|L | 5'-R(*CP*UP*CP*UP*CP*UP*CP*U)-3' | Structural mechanism of inhibition of the Rho transcription termination factor by the antibiotic bicyclomycin | X-ray diffraction | 3.15 | 2005-02-08 | ||||
| 14 | 1XPU|1|M | 5'-R(*CP*UP*CP*UP*CP*UP*CP*U)-3' | Structural mechanism of inhibition of the Rho transcription termination factor by the antibiotic 5a-(3-formylphenylsulfanyl)-dihydrobicyclomycin (FPDB) | X-ray diffraction | 3.05 | 2004-11-02 | ||||
| 15 | 1XPR|1|M | 5'-R(*CP*UP*CP*UP*CP*UP*CP*U)-3' | Structural mechanism of inhibition of the Rho transcription termination factor by the antibiotic 5a-formylbicyclomycin (FB) | X-ray diffraction | 3.15 | 2004-11-02 | ||||
| 16 | 1XPO|1|G | 5'-R(*CP*UP*CP*UP*CP*UP*CP*U)-3' | Structural mechanism of inhibition of the Rho transcription termination factor by the antibiotic bicyclomycin | X-ray diffraction | 3.15 | 2005-02-08 | ||||
| 17 | 1XPR|1|H | 5'-R(*CP*UP*CP*UP*CP*UP*CP*U)-3' | Structural mechanism of inhibition of the Rho transcription termination factor by the antibiotic 5a-formylbicyclomycin (FB) | X-ray diffraction | 3.15 | 2004-11-02 | ||||
| 18 | 1XPR|1|G | 5'-R(*CP*UP*CP*UP*CP*UP*CP*U)-3' | Structural mechanism of inhibition of the Rho transcription termination factor by the antibiotic 5a-formylbicyclomycin (FB) | X-ray diffraction | 3.15 | 2004-11-02 |
Release history
| Release | 8.0 | 7.0 | 9.0 | 9.1 | 9.2 | 9.3 | 9.4 | 9.5 | 9.6 | 9.7 | 9.8 | 9.9 | 9.10 | 9.11 | 9.12 | 9.13 | 9.14 | 9.15 | 9.16 | 9.17 | 9.18 | 9.19 | 9.20 | 9.21 | 9.22 | 9.23 | 9.24 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2017-04-05 | 2017-04-05 | 2017-10-26 | 2017-11-07 | 2017-12-02 | 2017-12-13 | 2017-12-21 | 2017-12-22 | 2018-01-04 | 2018-01-05 | 2018-01-10 | 2018-01-11 | 2018-01-12 | 2018-01-28 | 2018-04-01 | 2018-04-01 | 2018-09-14 | 2018-11-09 | 2018-11-16 | 2018-11-23 | 2018-11-30 | 2018-12-05 | 2018-12-12 | 2018-12-19 | 2018-12-26 | 2019-01-02 | 2019-01-09 |
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
|---|---|---|---|---|---|
| NR_4.0_88285.1 | NR_4.0_88285.1 | 8.0 | (18) 1XPO|1|G, 1XPU|1|L, 1XPU|1|K, 1XPU|1|J, 1XPU|1|H, 1XPU|1|G, 1XPR|1|M, 1XPR|1|L, 1XPR|1|K, 1XPR|1|J, 1XPR|1|H, 1XPR|1|G, 1XPO|1|M, 1XPO|1|L, 1XPO|1|K, 1XPO|1|J, 1XPO|1|H, 1XPU|1|M | (0) | (0) |
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
|---|
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length | NAKB_NA_annotation | NAKB_protein_annotation |
|---|---|---|---|---|---|---|---|
| 1 | 1XPR|1|L | Title: Structural mechanism of inhibition of the Rho transcription termination factor by the antibiotic 5a-formylbicyclomycin (FB) | X-RAY DIFFRACTION | 3.15 | 2 | ||
| 2 | 1XPU|1|G | Title: Structural mechanism of inhibition of the Rho transcription termination factor by the antibiotic 5a-(3-formylphenylsulfanyl)-dihydrobicyclomycin (FPDB) | X-RAY DIFFRACTION | 3.05 | 2 | ||
| 3 | 1XPU|1|L | Title: Structural mechanism of inhibition of the Rho transcription termination factor by the antibiotic 5a-(3-formylphenylsulfanyl)-dihydrobicyclomycin (FPDB) | X-RAY DIFFRACTION | 3.05 | 2 | ||
| 4 | 1XPO|1|J | Title: Structural mechanism of inhibition of the Rho transcription termination factor by the antibiotic bicyclomycin | X-RAY DIFFRACTION | 3.15 | 2 | ||
| 5 | 1XPO|1|L | Title: Structural mechanism of inhibition of the Rho transcription termination factor by the antibiotic bicyclomycin | X-RAY DIFFRACTION | 3.15 | 2 | ||
| 6 | 1XPU|1|J | Title: Structural mechanism of inhibition of the Rho transcription termination factor by the antibiotic 5a-(3-formylphenylsulfanyl)-dihydrobicyclomycin (FPDB) | X-RAY DIFFRACTION | 3.05 | 2 | ||
| 7 | 1XPR|1|M | Title: Structural mechanism of inhibition of the Rho transcription termination factor by the antibiotic 5a-formylbicyclomycin (FB) | X-RAY DIFFRACTION | 3.15 | 2 | ||
| 8 | 1XPU|1|M | Title: Structural mechanism of inhibition of the Rho transcription termination factor by the antibiotic 5a-(3-formylphenylsulfanyl)-dihydrobicyclomycin (FPDB) | X-RAY DIFFRACTION | 3.05 | 2 | ||
| 9 | 1XPR|1|J | Title: Structural mechanism of inhibition of the Rho transcription termination factor by the antibiotic 5a-formylbicyclomycin (FB) | X-RAY DIFFRACTION | 3.15 | 2 | ||
| 10 | 1XPU|1|K | Title: Structural mechanism of inhibition of the Rho transcription termination factor by the antibiotic 5a-(3-formylphenylsulfanyl)-dihydrobicyclomycin (FPDB) | X-RAY DIFFRACTION | 3.05 | 2 | ||
| 11 | 1XPO|1|H | Title: Structural mechanism of inhibition of the Rho transcription termination factor by the antibiotic bicyclomycin | X-RAY DIFFRACTION | 3.15 | 2 | ||
| 12 | 1XPO|1|M | Title: Structural mechanism of inhibition of the Rho transcription termination factor by the antibiotic bicyclomycin | X-RAY DIFFRACTION | 3.15 | 2 | ||
| 13 | 1XPR|1|K | Title: Structural mechanism of inhibition of the Rho transcription termination factor by the antibiotic 5a-formylbicyclomycin (FB) | X-RAY DIFFRACTION | 3.15 | 2 | ||
| 14 | 1XPU|1|H | Title: Structural mechanism of inhibition of the Rho transcription termination factor by the antibiotic 5a-(3-formylphenylsulfanyl)-dihydrobicyclomycin (FPDB) | X-RAY DIFFRACTION | 3.05 | 2 | ||
| 15 | 1XPO|1|K | Title: Structural mechanism of inhibition of the Rho transcription termination factor by the antibiotic bicyclomycin | X-RAY DIFFRACTION | 3.15 | 2 | ||
| 16 | 1XPO|1|G | Title: Structural mechanism of inhibition of the Rho transcription termination factor by the antibiotic bicyclomycin | X-RAY DIFFRACTION | 3.15 | 2 | ||
| 17 | 1XPR|1|H | Title: Structural mechanism of inhibition of the Rho transcription termination factor by the antibiotic 5a-formylbicyclomycin (FB) | X-RAY DIFFRACTION | 3.15 | 2 | ||
| 18 | 1XPR|1|G | Title: Structural mechanism of inhibition of the Rho transcription termination factor by the antibiotic 5a-formylbicyclomycin (FB) | X-RAY DIFFRACTION | 3.15 | 2 |
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