Equivalence class NR_4.0_63549.1 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 2BU1|1|S (rep) | 5'-R(*AP*CP*AP*UP*GP*AP*GP*GP*AP*UP *5BU*AP*CP*CP*CP*AP*UP*GP*U)-3' | Escherichia virus MS2 | Viruses | MS2-RNA HAIRPIN (5BRU -5) COMPLEX | X-ray diffraction | 2.2 | 2005-08-18 | ||
| 2 | 2BU1|1|R | 5'-R(*AP*CP*AP*UP*GP*AP*GP*GP*AP*UP *5BU*AP*CP*CP*CP*AP*UP*GP*U)-3' | Escherichia virus MS2 | Viruses | MS2-RNA HAIRPIN (5BRU -5) COMPLEX | X-ray diffraction | 2.2 | 2005-08-18 |
Release history
| Release | 6.0 |
|---|---|
| Date | 2017-04-04 |
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
|---|---|---|---|---|---|
| NR_4.0_63549.1 | NR_4.0_00888.1 | 6.0 | (2) 2BU1|1|S, 2BU1|1|R | (0) | (34) 2B2E|1|R, 2B2G|1|R, 1ZDH|1|S, 1ZDI|1|S, 1AQ3|1|R, 2IZM|1|R, 1AQ4|1|R, 2IZ8|1|S, 2C51|1|S, 2C4Z|1|R, 2C50|1|R, 2BQ5|1|S, 2C4Q|1|S, 2BNY|1|R, 1ZDK|1|S, 1ZDH|1|R, 2IZ9|1|S, 2C51|1|R, 2C4Y|1|S, 2BQ5|1|R, 2B2E|1|S, 1ZDI|1|R, 2IZM|1|S, 1AQ3|1|S, 2IZ8|1|R, 2C4Z|1|S, 2C4Q|1|R, 2B2G|1|S, 1ZDK|1|R, 1AQ4|1|S, 2IZ9|1|R, 2C50|1|S, 2C4Y|1|R, 2BNY|1|S |
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
|---|---|---|---|---|---|
| NR_4.0_63549.1 | NR_4.0_71282.1 | 7.0 | (2) 2BU1|1|S, 2BU1|1|R | (0) | (34) 2C4Y|1|R, 1ZDI|1|R, 2C4Z|1|R, 1ZDH|1|R, 2C4Q|1|S, 1ZDH|1|S, 2C4Y|1|S, 1AQ4|1|S, 2C4Q|1|R, 1AQ4|1|R, 2BQ5|1|S, 2IZM|1|S, 1AQ3|1|S, 2IZM|1|R, 1AQ3|1|R, 2BQ5|1|R, 2IZ9|1|S, 2BNY|1|S, 2IZ9|1|R, 2BNY|1|R, 2IZ8|1|S, 2B2G|1|S, 2IZ8|1|R, 2B2G|1|R, 2C51|1|S, 2B2E|1|S, 2C51|1|R, 2B2E|1|R, 2C50|1|S, 1ZDK|1|S, 2C50|1|R, 1ZDK|1|R, 2C4Z|1|S, 1ZDI|1|S |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length | NAKB_NA_annotation | NAKB_protein_annotation |
|---|---|---|---|---|---|---|---|
| 1 | 2BU1|1|S | Title: MS2-RNA HAIRPIN (5BRU -5) COMPLEX | X-RAY DIFFRACTION | 2.2 | 16 | ||
| 2 | 2BU1|1|R | Title: MS2-RNA HAIRPIN (5BRU -5) COMPLEX | X-RAY DIFFRACTION | 2.2 | 16 |
Coloring options: