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Equivalence class NR_4.0_71282.1 Obsolete

#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. ÅDate
12C4Q|1|R (rep)5'-R(*AP*CP*AP*UP*GP*AP*GP*GP*AP*UP *PYO*AP*CP*CP*CP*AP*UP*GP*U)-3'Escherichia virus MS2VirusesMS2-RNA HAIRPIN (2ONE -5) COMPLEXX-ray diffraction2.382005-11-07
22C4Y|1|R5'-R(*AP*CP*AP*UP*GP*AP*GP*GP*AP*UP *SUR*AP*CP*CP*CP*AP*UP*GP*U)-3'Escherichia virus MS2VirusesMS2-RNA HAIRPIN (2THIOURACIL-5) COMPLEXX-ray diffraction2.682006-01-05
32C4Q|1|S5'-R(*AP*CP*AP*UP*GP*AP*GP*GP*AP*UP *PYO*AP*CP*CP*CP*AP*UP*GP*U)-3'Escherichia virus MS2VirusesMS2-RNA HAIRPIN (2ONE -5) COMPLEXX-ray diffraction2.382005-11-07
42BU1|1|R5'-R(*AP*CP*AP*UP*GP*AP*GP*GP*AP*UP *5BU*AP*CP*CP*CP*AP*UP*GP*U)-3'Escherichia virus MS2VirusesMS2-RNA HAIRPIN (5BRU -5) COMPLEXX-ray diffraction2.22005-08-18
52C4Y|1|S5'-R(*AP*CP*AP*UP*GP*AP*GP*GP*AP*UP *SUR*AP*CP*CP*CP*AP*UP*GP*U)-3'Escherichia virus MS2VirusesMS2-RNA HAIRPIN (2THIOURACIL-5) COMPLEXX-ray diffraction2.682006-01-05
62IZ8|1|RRNA, (5'-R(*AP*CP*AP*UP*GP*AP*GP*GP*CP*UP*CP* AP*CP*CP*CP*AP*UP*GP*U)-3')Escherichia virus MS2VirusesMS2-RNA HAIRPIN (C-7) COMPLEXX-ray diffraction3.32006-07-27
72C4Z|1|S5'-R(*AP*CP*AP*UP*GP*AP*GP*GP*AP*SUR *SUR*AP*CP*CP*CP*AP*UP*GP*U)-3'Escherichia virus MS2VirusesMS2-RNA HAIRPIN (2SU -5-6) COMPLEXX-ray diffraction2.62006-01-05
82C4Z|1|R5'-R(*AP*CP*AP*UP*GP*AP*GP*GP*AP*SUR *SUR*AP*CP*CP*CP*AP*UP*GP*U)-3'Escherichia virus MS2VirusesMS2-RNA HAIRPIN (2SU -5-6) COMPLEXX-ray diffraction2.62006-01-05
92C51|1|R5'-R(*AP*CP*AP*UP*GP*AP*GP*GP*AP*UP *GP*AP*CP*CP*CP*AP*UP*GP*U)-3'Escherichia virus MS2VirusesMS2-RNA HAIRPIN (G -5) COMPLEXX-ray diffraction2.82006-01-05
102BU1|1|S5'-R(*AP*CP*AP*UP*GP*AP*GP*GP*AP*UP *5BU*AP*CP*CP*CP*AP*UP*GP*U)-3'Escherichia virus MS2VirusesMS2-RNA HAIRPIN (5BRU -5) COMPLEXX-ray diffraction2.22005-08-18
112C50|1|R5'-R(*AP*CP*AP*UP*GP*AP*GP*GP*AP*UP *AP*AP*CP*CP*CP*AP*UP*GP*U)-3'Escherichia virus MS2VirusesMS2-RNA HAIRPIN (A -5) COMPLEXX-ray diffraction2.652006-01-05
122C51|1|S5'-R(*AP*CP*AP*UP*GP*AP*GP*GP*AP*UP *GP*AP*CP*CP*CP*AP*UP*GP*U)-3'Escherichia virus MS2VirusesMS2-RNA HAIRPIN (G -5) COMPLEXX-ray diffraction2.82006-01-05
132IZ8|1|SRNA, (5'-R(*AP*CP*AP*UP*GP*AP*GP*GP*CP*UP*CP* AP*CP*CP*CP*AP*UP*GP*U)-3')Escherichia virus MS2VirusesMS2-RNA HAIRPIN (C-7) COMPLEXX-ray diffraction3.32006-07-27
142C50|1|S5'-R(*AP*CP*AP*UP*GP*AP*GP*GP*AP*UP *AP*AP*CP*CP*CP*AP*UP*GP*U)-3'Escherichia virus MS2VirusesMS2-RNA HAIRPIN (A -5) COMPLEXX-ray diffraction2.652006-01-05
151ZDH|1|RRNA (5'-R(*AP*CP*AP*UP*GP*AP*GP*GP*AP*UP*CP*AP*CP*CP*CP*AP*U P*GP*U)-3')synthetic constructSyntheticMS2 COAT PROTEIN/RNA COMPLEXX-ray diffraction2.71997-04-21
161ZDH|1|SRNA (5'-R(*AP*CP*AP*UP*GP*AP*GP*GP*AP*UP*CP*AP*CP*CP*CP*AP*U P*GP*U)-3')synthetic constructSyntheticMS2 COAT PROTEIN/RNA COMPLEXX-ray diffraction2.71997-04-21
172BQ5|1|R5'-R(*AP*CP*AP*UP*GP*AP*GP*GP*AP*UP *UP*AP*CP*CP*CP*AP*UP*GP*U)-3'Escherichia virus MS2VirusesMS2 (N87AE89K mutant) - RNA hairpin complexX-ray diffraction2.912006-03-22
182BNY|1|R5'-R(*AP*CP*AP*UP*GP*AP*GP*GP*AP*UP *UP*AP*CP*CP*CP*AP*UP*GP*U)-3'Escherichia virus MS2VirusesMS2 (N87A mutant) - RNA hairpin complexX-ray diffraction32006-03-22
192BQ5|1|S5'-R(*AP*CP*AP*UP*GP*AP*GP*GP*AP*UP *UP*AP*CP*CP*CP*AP*UP*GP*U)-3'Escherichia virus MS2VirusesMS2 (N87AE89K mutant) - RNA hairpin complexX-ray diffraction2.912006-03-22
202BNY|1|S5'-R(*AP*CP*AP*UP*GP*AP*GP*GP*AP*UP *UP*AP*CP*CP*CP*AP*UP*GP*U)-3'Escherichia virus MS2VirusesMS2 (N87A mutant) - RNA hairpin complexX-ray diffraction32006-03-22
211AQ4|1|RRNA (5'-R(*AP*CP*AP*UP*GP*AP*GP*GP*AP*UP*UP*AP*CP*CP*CP*AP*U P*GP*U)-3')Escherichia virus MS2VirusesSTRUCTURE OF A MS2 COAT PROTEIN MUTANT IN COMPLEX WITH AN RNA OPERATORX-ray diffraction31997-12-24
221AQ3|1|RRNA (5'-R(*AP*CP*AP*UP*GP*AP*GP*GP*AP*UP*UP*AP*CP*CP*CP*AP*U P*GP*U)-3')BACTERIOPHAGE MS2 CAPSID PROTEIN/RNA COMPLEXX-ray diffraction2.81997-12-24
231AQ3|1|SRNA (5'-R(*AP*CP*AP*UP*GP*AP*GP*GP*AP*UP*UP*AP*CP*CP*CP*AP*U P*GP*U)-3')BACTERIOPHAGE MS2 CAPSID PROTEIN/RNA COMPLEXX-ray diffraction2.81997-12-24
241AQ4|1|SRNA (5'-R(*AP*CP*AP*UP*GP*AP*GP*GP*AP*UP*UP*AP*CP*CP*CP*AP*U P*GP*U)-3')Escherichia virus MS2VirusesSTRUCTURE OF A MS2 COAT PROTEIN MUTANT IN COMPLEX WITH AN RNA OPERATORX-ray diffraction31997-12-24
252IZ9|1|R5'-R(*AP*CP*AP*UP*GP*AP*GP*GP*AP*U ONEP *AP*CP*CP*CP*AP*UP*GP*U)-3'Escherichia virus MS2VirusesMS2-RNA HAIRPIN (4ONE -5) COMPLEXX-ray diffraction2.852006-07-27
262IZ9|1|S5'-R(*AP*CP*AP*UP*GP*AP*GP*GP*AP*U ONEP *AP*CP*CP*CP*AP*UP*GP*U)-3'Escherichia virus MS2VirusesMS2-RNA HAIRPIN (4ONE -5) COMPLEXX-ray diffraction2.852006-07-27
272IZM|1|R5'-R(*AP*CP*AP*UP*GP*CP*GP*GP*AP*UP *CP*AP*CP*CP*CP*AP*UP*GP*U)-3'Escherichia virus MS2VirusesMS2-RNA HAIRPIN (C-10) COMPLEXX-ray diffraction2.72007-07-03
282IZM|1|S5'-R(*AP*CP*AP*UP*GP*CP*GP*GP*AP*UP *CP*AP*CP*CP*CP*AP*UP*GP*U)-3'Escherichia virus MS2VirusesMS2-RNA HAIRPIN (C-10) COMPLEXX-ray diffraction2.72007-07-03
291ZDI|1|RRNA (5'-R(*AP*CP*AP*UP*GP*AP*GP*GP*AP*UP*UP*AP*CP*CP*CP*AP*U P*GP*U)-3')RNA BACTERIOPHAGE MS2 COAT PROTEIN/RNA COMPLEXX-ray diffraction2.71997-04-21
302B2E|1|R5'-R(*AP*CP*AP*UP*GP*AP*GP*GP*AP*UP*UP*AP*CP*CP*CP*AP*UP*GP*U)-3'RNA stemloop from bacteriophage MS2 complexed with an N87S,E89K mutant MS2 capsidX-ray diffraction3.152006-05-09
312B2G|1|R5'-R(*AP*CP*AP*UP*GP*AP*GP*GP*AP*UP*UP*AP*CP*CP*CP*AP*UP*GP*U)-3'MS2 Wild-type RNA stemloop complexed with an N87S mutant MS2 capsidX-ray diffraction3.022006-05-09
321ZDK|1|RRNA (5'-R(P*AP*CP*AP*UP*GP*AP*GP*GP*AP*UP*CP*AP*CP*CP*CP*AP*UP*GP*U)-3')STRUCTURE OF BACTERIOPHAGE COAT PROTEIN-LOOP RNA COMPLEXX-ray diffraction2.861998-12-07
331ZDK|1|SRNA (5'-R(P*AP*CP*AP*UP*GP*AP*GP*GP*AP*UP*CP*AP*CP*CP*CP*AP*UP*GP*U)-3')STRUCTURE OF BACTERIOPHAGE COAT PROTEIN-LOOP RNA COMPLEXX-ray diffraction2.861998-12-07
341ZDI|1|SRNA (5'-R(*AP*CP*AP*UP*GP*AP*GP*GP*AP*UP*UP*AP*CP*CP*CP*AP*U P*GP*U)-3')RNA BACTERIOPHAGE MS2 COAT PROTEIN/RNA COMPLEXX-ray diffraction2.71997-04-21
352B2E|1|S5'-R(*AP*CP*AP*UP*GP*AP*GP*GP*AP*UP*UP*AP*CP*CP*CP*AP*UP*GP*U)-3'RNA stemloop from bacteriophage MS2 complexed with an N87S,E89K mutant MS2 capsidX-ray diffraction3.152006-05-09
362B2G|1|S5'-R(*AP*CP*AP*UP*GP*AP*GP*GP*AP*UP*UP*AP*CP*CP*CP*AP*UP*GP*U)-3'MS2 Wild-type RNA stemloop complexed with an N87S mutant MS2 capsidX-ray diffraction3.022006-05-09

Release history

Release8.07.09.09.19.29.39.49.59.69.79.89.99.10
Date2017-04-052017-04-052017-10-262017-11-072017-12-022017-12-132017-12-212017-12-222018-01-042018-01-052018-01-102018-01-112018-01-12

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent
NR_4.0_71282.1NR_4.0_71282.18.0(36) 1AQ3|1|R, 2BU1|1|S, 2C4Q|1|R, 2C4Q|1|S, 2C4Y|1|R, 2C4Y|1|S, 2C4Z|1|R, 2C4Z|1|S, 2C50|1|R, 2C50|1|S, 2C51|1|R, 2C51|1|S, 2IZ8|1|R, 2IZ8|1|S, 2IZ9|1|R, 2IZ9|1|S, 2IZM|1|R, 2BU1|1|R, 2BQ5|1|S, 1AQ3|1|S, 1AQ4|1|R, 1AQ4|1|S, 1ZDH|1|R, 1ZDH|1|S, 1ZDI|1|R, 1ZDI|1|S, 1ZDK|1|R, 1ZDK|1|S, 2B2E|1|R, 2B2E|1|S, 2B2G|1|R, 2B2G|1|S, 2BNY|1|R, 2BNY|1|S, 2BQ5|1|R, 2IZM|1|S(0) (0)

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLengthNAKB_NA_annotationNAKB_protein_annotation
11AQ4|1|STitle: STRUCTURE OF A MS2 COAT PROTEIN MUTANT IN COMPLEX WITH AN RNA OPERATORX-RAY DIFFRACTION314
21ZDK|1|RTitle: STRUCTURE OF BACTERIOPHAGE COAT PROTEIN-LOOP RNA COMPLEXX-RAY DIFFRACTION2.8619
31ZDH|1|RTitle: MS2 COAT PROTEIN/RNA COMPLEXX-RAY DIFFRACTION2.713
41ZDI|1|RTitle: RNA BACTERIOPHAGE MS2 COAT PROTEIN/RNA COMPLEXX-RAY DIFFRACTION2.716
51ZDH|1|STitle: MS2 COAT PROTEIN/RNA COMPLEXX-RAY DIFFRACTION2.713
61ZDK|1|STitle: STRUCTURE OF BACTERIOPHAGE COAT PROTEIN-LOOP RNA COMPLEXX-RAY DIFFRACTION2.8619
71ZDI|1|STitle: RNA BACTERIOPHAGE MS2 COAT PROTEIN/RNA COMPLEXX-RAY DIFFRACTION2.713
81AQ3|1|STitle: BACTERIOPHAGE MS2 CAPSID PROTEIN/RNA COMPLEXX-RAY DIFFRACTION2.812
92IZM|1|STitle: MS2-RNA HAIRPIN (C-10) COMPLEXX-RAY DIFFRACTION2.713
102C50|1|STitle: MS2-RNA HAIRPIN (A -5) COMPLEXX-RAY DIFFRACTION2.6513
112BU1|1|STitle: MS2-RNA HAIRPIN (5BRU -5) COMPLEXX-RAY DIFFRACTION2.216
122C4Q|1|STitle: MS2-RNA HAIRPIN (2ONE -5) COMPLEXX-RAY DIFFRACTION2.3816
132C51|1|STitle: MS2-RNA HAIRPIN (G -5) COMPLEXX-RAY DIFFRACTION2.813
142B2G|1|STitle: MS2 Wild-type RNA stemloop complexed with an N87S mutant MS2 capsidX-RAY DIFFRACTION3.0215
152B2E|1|STitle: RNA stemloop from bacteriophage MS2 complexed with an N87S,E89K mutant MS2 capsidX-RAY DIFFRACTION3.1514
162B2E|1|RTitle: RNA stemloop from bacteriophage MS2 complexed with an N87S,E89K mutant MS2 capsidX-RAY DIFFRACTION3.1516
171AQ4|1|RTitle: STRUCTURE OF A MS2 COAT PROTEIN MUTANT IN COMPLEX WITH AN RNA OPERATORX-RAY DIFFRACTION316
182IZM|1|RTitle: MS2-RNA HAIRPIN (C-10) COMPLEXX-RAY DIFFRACTION2.713
192BQ5|1|RTitle: MS2 (N87AE89K mutant) - RNA hairpin complexX-RAY DIFFRACTION2.9119
202C4Y|1|RTitle: MS2-RNA HAIRPIN (2THIOURACIL-5) COMPLEXX-RAY DIFFRACTION2.6816
212C4Z|1|RTitle: MS2-RNA HAIRPIN (2SU -5-6) COMPLEXX-RAY DIFFRACTION2.615
222IZ8|1|RTitle: MS2-RNA HAIRPIN (C-7) COMPLEXX-RAY DIFFRACTION3.316
232IZ8|1|STitle: MS2-RNA HAIRPIN (C-7) COMPLEXX-RAY DIFFRACTION3.313
242BU1|1|RTitle: MS2-RNA HAIRPIN (5BRU -5) COMPLEXX-RAY DIFFRACTION2.216
252C4Q|1|RTitle: MS2-RNA HAIRPIN (2ONE -5) COMPLEXX-RAY DIFFRACTION2.3816
262BNY|1|RTitle: MS2 (N87A mutant) - RNA hairpin complexX-RAY DIFFRACTION315
272C50|1|RTitle: MS2-RNA HAIRPIN (A -5) COMPLEXX-RAY DIFFRACTION2.6514
282C51|1|RTitle: MS2-RNA HAIRPIN (G -5) COMPLEXX-RAY DIFFRACTION2.815
292B2G|1|RTitle: MS2 Wild-type RNA stemloop complexed with an N87S mutant MS2 capsidX-RAY DIFFRACTION3.0216
301AQ3|1|RTitle: BACTERIOPHAGE MS2 CAPSID PROTEIN/RNA COMPLEXX-RAY DIFFRACTION2.816
312BNY|1|STitle: MS2 (N87A mutant) - RNA hairpin complexX-RAY DIFFRACTION313
322C4Y|1|STitle: MS2-RNA HAIRPIN (2THIOURACIL-5) COMPLEXX-RAY DIFFRACTION2.6812
332BQ5|1|STitle: MS2 (N87AE89K mutant) - RNA hairpin complexX-RAY DIFFRACTION2.9117
342C4Z|1|STitle: MS2-RNA HAIRPIN (2SU -5-6) COMPLEXX-RAY DIFFRACTION2.611
352IZ9|1|STitle: MS2-RNA HAIRPIN (4ONE -5) COMPLEXX-RAY DIFFRACTION2.8514
362IZ9|1|RTitle: MS2-RNA HAIRPIN (4ONE -5) COMPLEXX-RAY DIFFRACTION2.8514

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