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Equivalence class NR_4.0_35391.1 Obsolete

#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. ÅDate
14Z4D|1|B+ 4Z4D|1|D (rep)RNA (5'-R(P*UP*UP*CP*AP*CP*AP*UP*UP*GP*CP*CP*CP*AP*AP*GP*UP*CP*UP*UP*U)-3'), RNA (5'-R(*CP*AP*AP*UP*GP*UP*GP*AP*G)-3')synthetic constructSyntheticHuman Argonaute2 Bound to t1-G Target RNAX-ray diffraction1.62015-09-23
24Z4E|1|B+ 4Z4E|1|DRNA (5'-R(P*UP*UP*CP*AP*CP*AP*UP*UP*GP*CP*CP*CP*AP*AP*GP*UP*CP*UP*U)-3'), RNA (5'-R(*CP*AP*AP*UP*GP*UP*GP*AP*U)-3')synthetic constructSyntheticHuman Argonaute2 Bound to t1-U Target RNAX-ray diffraction1.82015-09-23
34W5O|1|B+ 4W5O|1|DRNA (5'-R(P*UP*UP*CP*AP*CP*AP*UP*UP*GP*CP*CP*CP*AP*AP*GP*UP*CP*UP*UP*U)-3'), RNA (5'-R(*CP*AP*AP*UP*GP*UP*GP*AP*AP*A)-3')synthetic constructSyntheticThe Crystal Structure of Human Argonaute2 Bound to a Guide and Target RNA Containing Seed Pairing from 2-9X-ray diffraction1.82014-11-12
44Z4C|1|B+ 4Z4C|1|DRNA (5'-R(P*UP*UP*CP*AP*CP*AP*UP*UP*GP*CP*CP*CP*AP*AP*GP*UP*CP*UP*U)-3'), RNA (5'-R(*CP*AP*AP*UP*GP*UP*GP*AP*C)-3')synthetic constructSyntheticHuman Argonaute2 Bound to t1-C Target RNAX-ray diffraction2.32015-09-23
54Z4H|1|B+ 4Z4H|1|DRNA (5'-R(P*UP*UP*CP*AP*CP*AP*UP*UP*GP*CP*CP*CP*AP*AP*GP*UP*CP*UP*UP*U)-3'), RNA (5'-R(*CP*AP*AP*UP*GP*UP*GP*A)-3')synthetic constructSyntheticHuman Argonaute2 A481T Mutant Bound to t1-A Target RNAX-ray diffraction2.52015-09-23
64Z4I|1|B+ 4Z4I|1|DRNA (5'-R(P*UP*UP*CP*AP*CP*AP*UP*UP*GP*CP*CP*CP*AP*AP*GP*UP*CP*UP*UP*U)-3'), RNA (5'-R(*CP*AP*AP*UP*GP*UP*GP*A)-3')synthetic constructSyntheticHuman Argonaute2 A481T Mutant Bound to t1-G Target RNAX-ray diffraction2.82015-09-23
74Z4G|1|B+ 4Z4G|1|DRNA (5'-R(P*UP*UP*CP*AP*CP*AP*UP*UP*GP*CP*CP*CP*AP*AP*GP*UP*CP*UP*UP*U)-3'), RNA (5'-R(*CP*AP*AP*UP*GP*UP*GP*A)-D(P*(IMP))-3')synthetic constructSyntheticHuman Argonaute2 Bound to t1-Inosine Target RNAX-ray diffraction2.72015-09-23
84W5T|1|B+ 4W5T|1|DRNA (5'-R(P*UP*UP*CP*AP*CP*AP*UP*UP*GP*CP*CP*CP*AP*AP*UP*U)-3'), RNA (5'-R(*AP*CP*AP*UP*GP*UP*GP*AP*AP*A)-3')synthetic constructSyntheticThe Crystal Structure of Human Argonaute2 Bound to a Guide and Target RNA Containing Seed Pairing from 2-7X-ray diffraction2.52014-11-12
94Z4F|1|B+ 4Z4F|1|DRNA (5'-R(P*UP*UP*CP*AP*CP*AP*UP*UP*GP*CP*CP*CP*AP*AP*GP*UP*UP*U)-3'), RNA (5'-R(*CP*AP*AP*UP*GP*UP*GP*AP*(N6G)P*A)-3')synthetic constructSyntheticHuman Argonaute2 Bound to t1-DAP Target RNAX-ray diffraction2.82015-09-23
104W5R|1|B+ 4W5R|1|DRNA (5'-R(P*UP*UP*CP*AP*CP*AP*UP*UP*GP*UP*U)-3'), RNA (5'-R(P*AP*AP*UP*GP*UP*GP*AP*AP*A)-3')synthetic constructSyntheticThe Crystal Structure of Human Argonaute2 Bound to a Guide and Target RNA Containing Seed Pairing from 2-8 (Long Target)X-ray diffraction2.52014-11-12
114W5Q|1|B+ 4W5Q|1|DRNA (5'-R(P*UP*UP*CP*AP*CP*AP*UP*UP*GP*CP*CP*CP*AP*AP*GP*UP*CP*U)-3'), RNA (5'-R(*AP*AP*AP*UP*GP*UP*GP*AP*AP*A)-3')synthetic constructSyntheticThe Crystal Structure of Human Argonaute2 Bound to a Guide and Target RNA Containing Seed Pairing from 2-8X-ray diffraction3.12014-11-12

Release history

Release8.07.09.09.19.29.39.49.59.69.79.89.99.109.119.129.139.14
Date2017-04-052017-04-052017-10-262017-11-072017-12-022017-12-132017-12-212017-12-222018-01-042018-01-052018-01-102018-01-112018-01-122018-01-282018-04-012018-04-012018-09-14

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent
NR_4.0_35391.1NR_4.0_35391.18.0(11) 4W5O|1|B+4W5O|1|D, 4Z4H|1|B+4Z4H|1|D, 4Z4G|1|B+4Z4G|1|D, 4Z4F|1|B+4Z4F|1|D, 4Z4E|1|B+4Z4E|1|D, 4Z4D|1|B+4Z4D|1|D, 4Z4C|1|B+4Z4C|1|D, 4W5T|1|B+4W5T|1|D, 4W5R|1|B+4W5R|1|D, 4W5Q|1|B+4W5Q|1|D, 4Z4I|1|B+4Z4I|1|D(0) (0)

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child
NR_4.0_35391.1NR_4.0_35391.29.15(11) 4Z4I|1|B+4Z4I|1|D, 4Z4H|1|B+4Z4H|1|D, 4Z4G|1|B+4Z4G|1|D, 4Z4F|1|B+4Z4F|1|D, 4Z4E|1|B+4Z4E|1|D, 4Z4D|1|B+4Z4D|1|D, 4Z4C|1|B+4Z4C|1|D, 4W5T|1|B+4W5T|1|D, 4W5R|1|B+4W5R|1|D, 4W5Q|1|B+4W5Q|1|D, 4W5O|1|B+4W5O|1|D(0) (1) 6CBD|1|B+6CBD|1|C

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLengthNAKB_NA_annotationNAKB_protein_annotation
14W5T|1|B+4W5T|1|DTitle: The Crystal Structure of Human Argonaute2 Bound to a Guide and Target RNA Containing Seed Pairing from 2-7X-RAY DIFFRACTION2.516
24W5R|1|B+4W5R|1|DTitle: The Crystal Structure of Human Argonaute2 Bound to a Guide and Target RNA Containing Seed Pairing from 2-8 (Long Target)X-RAY DIFFRACTION2.511
34Z4I|1|B+4Z4I|1|DTitle: Human Argonaute2 A481T Mutant Bound to t1-G Target RNAX-RAY DIFFRACTION2.820
44Z4G|1|B+4Z4G|1|DTitle: Human Argonaute2 Bound to t1-Inosine Target RNAX-RAY DIFFRACTION2.720
54Z4H|1|B+4Z4H|1|DTitle: Human Argonaute2 A481T Mutant Bound to t1-A Target RNAX-RAY DIFFRACTION2.520
64W5O|1|B+4W5O|1|DTitle: The Crystal Structure of Human Argonaute2 Bound to a Guide and Target RNA Containing Seed Pairing from 2-9X-RAY DIFFRACTION1.820
74Z4D|1|B+4Z4D|1|DTitle: Human Argonaute2 Bound to t1-G Target RNAX-RAY DIFFRACTION1.620
84Z4F|1|B+4Z4F|1|DTitle: Human Argonaute2 Bound to t1-DAP Target RNAX-RAY DIFFRACTION2.818
94W5Q|1|B+4W5Q|1|DTitle: The Crystal Structure of Human Argonaute2 Bound to a Guide and Target RNA Containing Seed Pairing from 2-8X-RAY DIFFRACTION3.118
104Z4E|1|B+4Z4E|1|DTitle: Human Argonaute2 Bound to t1-U Target RNAX-RAY DIFFRACTION1.819
114Z4C|1|B+4Z4C|1|DTitle: Human Argonaute2 Bound to t1-C Target RNAX-RAY DIFFRACTION2.319

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