Equivalence class NR_all_80547.1 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 4PEH|1|X (rep) | RNA (5'-R(*CP*UP*AP*(A2P)P*AP*CP*AP*A)-3') | synthetic construct | Synthetic | Dbr1 in complex with synthetic linear RNA | X-ray diffraction | 2.1 | 2014-08-27 | ||
| 2 | 4PEH|1|Y | RNA (5'-R(*CP*UP*AP*(A2P)P*AP*CP*AP*A)-3') | synthetic construct | Synthetic | Dbr1 in complex with synthetic linear RNA | X-ray diffraction | 2.1 | 2014-08-27 |
Release history
| Release | 3.0 |
|---|---|
| Date | 2016-07-25 |
Parents
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
|---|---|---|---|---|---|
| NR_all_80547.1 | NR_2.5_96136.1 | 4.0 | (2) 4PEH|1|Y, 4PEH|1|X | (0) | (3) 4PEH|1|Z, 4PEH|1|W, 4PEH|1|V |
| NR_all_80547.1 | NR_20.0_96136.1 | 4.0 | (2) 4PEH|1|Y, 4PEH|1|X | (0) | (3) 4PEH|1|Z, 4PEH|1|W, 4PEH|1|V |
| NR_all_80547.1 | NR_3.0_96136.1 | 4.0 | (2) 4PEH|1|Y, 4PEH|1|X | (0) | (3) 4PEH|1|Z, 4PEH|1|W, 4PEH|1|V |
| NR_all_80547.1 | NR_3.5_96136.1 | 4.0 | (2) 4PEH|1|Y, 4PEH|1|X | (0) | (3) 4PEH|1|V, 4PEH|1|Z, 4PEH|1|W |
| NR_all_80547.1 | NR_4.0_96136.1 | 4.0 | (2) 4PEH|1|Y, 4PEH|1|X | (0) | (3) 4PEH|1|Z, 4PEH|1|W, 4PEH|1|V |
| NR_all_80547.1 | NR_all_96136.1 | 4.0 | (2) 4PEH|1|Y, 4PEH|1|X | (0) | (3) 4PEH|1|Z, 4PEH|1|W, 4PEH|1|V |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length | NAKB_NA_annotation | NAKB_protein_annotation |
|---|---|---|---|---|---|---|---|
| 1 | 4PEH|1|X | Title: Dbr1 in complex with synthetic linear RNA | X-RAY DIFFRACTION | 2.1 | 5 | ||
| 2 | 4PEH|1|Y | Title: Dbr1 in complex with synthetic linear RNA | X-RAY DIFFRACTION | 2.1 | 4 |
Coloring options: