Equivalence class NR_4.0_96136.1 Obsolete
# | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
---|---|---|---|---|---|---|---|---|---|---|
1 | 4PEH|1|Y (rep) | RNA (5'-R(*CP*UP*AP*(A2P)P*AP*CP*AP*A)-3') | synthetic construct | Synthetic | Dbr1 in complex with synthetic linear RNA | X-ray diffraction | 2.1 | 2014-08-27 | ||
2 | 4PEH|1|X | RNA (5'-R(*CP*UP*AP*(A2P)P*AP*CP*AP*A)-3') | synthetic construct | Synthetic | Dbr1 in complex with synthetic linear RNA | X-ray diffraction | 2.1 | 2014-08-27 | ||
3 | 4PEH|1|W | RNA (5'-R(*CP*UP*AP*(A2P)P*AP*CP*AP*A)-3') | synthetic construct | Synthetic | Dbr1 in complex with synthetic linear RNA | X-ray diffraction | 2.1 | 2014-08-27 | ||
4 | 4PEH|1|V | RNA (5'-R(*CP*UP*AP*(A2P)P*AP*CP*AP*A)-3') | synthetic construct | Synthetic | Dbr1 in complex with synthetic linear RNA | X-ray diffraction | 2.1 | 2014-08-27 | ||
5 | 4PEH|1|Z | RNA (5'-R(*CP*UP*AP*(A2P)P*AP*CP*AP*A)-3') | synthetic construct | Synthetic | Dbr1 in complex with synthetic linear RNA | X-ray diffraction | 2.1 | 2014-08-27 |
Release history
Release | 4.0 |
---|---|
Date | 2016-07-25 |
Parents
This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
---|---|---|---|---|---|
NR_4.0_96136.1 | NR_all_14359.1 | 4.0 | (1) 4PEH|1|Z | (4) 4PEH|1|Y, 4PEH|1|X, 4PEH|1|W, 4PEH|1|V | (0) |
NR_4.0_96136.1 | NR_all_19249.1 | 4.0 | (1) 4PEH|1|W | (4) 4PEH|1|Z, 4PEH|1|Y, 4PEH|1|X, 4PEH|1|V | (0) |
NR_4.0_96136.1 | NR_all_66432.1 | 4.0 | (1) 4PEH|1|V | (4) 4PEH|1|Z, 4PEH|1|Y, 4PEH|1|X, 4PEH|1|W | (0) |
NR_4.0_96136.1 | NR_all_80547.1 | 4.0 | (2) 4PEH|1|Y, 4PEH|1|X | (3) 4PEH|1|W, 4PEH|1|V, 4PEH|1|Z | (0) |
Children
This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
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Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).#S | PDB | Title | Method | Resolution | Length | NAKB_NA_annotation | NAKB_protein_annotation |
---|---|---|---|---|---|---|---|
1 | 4PEH|1|Y | Title: Dbr1 in complex with synthetic linear RNA | X-RAY DIFFRACTION | 2.1 | 4 | ||
2 | 4PEH|1|V | Title: Dbr1 in complex with synthetic linear RNA | X-RAY DIFFRACTION | 2.1 | 3 | ||
3 | 4PEH|1|Z | Title: Dbr1 in complex with synthetic linear RNA | X-RAY DIFFRACTION | 2.1 | 3 | ||
4 | 4PEH|1|X | Title: Dbr1 in complex with synthetic linear RNA | X-RAY DIFFRACTION | 2.1 | 5 | ||
5 | 4PEH|1|W | Title: Dbr1 in complex with synthetic linear RNA | X-RAY DIFFRACTION | 2.1 | 4 |
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