Equivalence class NR_all_42873.1 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 5BUD|1|E (rep) | RNA (5'-R(P*UP*UP*UP*U)-3') | Candida albicans | Eukarya | Crystal structure of Candida albicans Rai1 in complex with pU5-Mn2+ | X-ray diffraction | 1.99 | 2015-07-08 |
Release history
| Release | 3.0 |
|---|---|
| Date | 2016-07-25 |
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
|---|
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
|---|---|---|---|---|---|
| NR_all_42873.1 | NR_2.0_97271.1 | 4.0 | (1) 5BUD|1|E | (0) | (3) 5BUD|1|D, 4J7M|1|B, 4J7L|1|B |
| NR_all_42873.1 | NR_2.5_97271.1 | 4.0 | (1) 5BUD|1|E | (0) | (3) 5BUD|1|D, 4J7M|1|B, 4J7L|1|B |
| NR_all_42873.1 | NR_20.0_97271.1 | 4.0 | (1) 5BUD|1|E | (0) | (4) 4J7M|1|B, 4J7L|1|B, 5FN1|1|B, 5BUD|1|D |
| NR_all_42873.1 | NR_3.0_97271.1 | 4.0 | (1) 5BUD|1|E | (0) | (3) 5BUD|1|D, 4J7M|1|B, 4J7L|1|B |
| NR_all_42873.1 | NR_3.5_97271.1 | 4.0 | (1) 5BUD|1|E | (0) | (3) 5BUD|1|D, 4J7M|1|B, 4J7L|1|B |
| NR_all_42873.1 | NR_4.0_97271.1 | 4.0 | (1) 5BUD|1|E | (0) | (4) 5FN1|1|B, 5BUD|1|D, 4J7M|1|B, 4J7L|1|B |
| NR_all_42873.1 | NR_all_97271.1 | 4.0 | (1) 5BUD|1|E | (0) | (4) 5FN1|1|B, 5BUD|1|D, 4J7M|1|B, 4J7L|1|B |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length | NAKB_NA_annotation | NAKB_protein_annotation |
|---|---|---|---|---|---|---|---|
| 1 | 5BUD|1|E | Title: Crystal structure of Candida albicans Rai1 in complex with pU5-Mn2+ | X-RAY DIFFRACTION | 1.99 | 5 |
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