#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. ÅDate
11NUJ|1|E+ 1NUJ|1|F (rep)5'-R(*CP*GP*GP*AP*CP*CP*GP*AP*GP*CP*CP*AP*G)-3', 5'-R(*GP*CP*UP*GP*GP*GP*AP*GP*UP*CP*C)-3'THE LEADZYME STRUCTURE BOUND TO MG(H20)6(II) AT 1.8 A RESOLUTIONX-ray diffraction1.82003-08-19
2429D|1|C+ 429D|1|DRNA (5'-R(*CP*GP*GP*AP*CP*CP*GP*AP*GP*CP*CP*AP*G)-3'), RNA (5'-R(*GP*CP*UP*GP*GP*GP*AP*GP*UP*CP*C)-3')CRYSTAL STRUCTURE OF A LEADZYME; METAL BINDING AND IMPLICATIONS FOR CATALYSISX-ray diffraction2.71999-03-01
31NUV|1|C+ 1NUV|1|D5'-R(*CP*GP*GP*AP*CP*CP*GP*AP*GP*CP*CP*AP*G)-3', 5'-R(*GP*CP*UP*GP*GP*GP*AP*GP*UP*CP*C)-3'The Leadzyme Ribozyme Bound to Mg(H2O)6(II) and Sr(II) at 1.8 A resolutionX-ray diffraction1.812003-08-19
41NUJ|1|C+ 1NUJ|1|D5'-R(*CP*GP*GP*AP*CP*CP*GP*AP*GP*CP*CP*AP*G)-3', 5'-R(*GP*CP*UP*GP*GP*GP*AP*GP*UP*CP*C)-3'THE LEADZYME STRUCTURE BOUND TO MG(H20)6(II) AT 1.8 A RESOLUTIONX-ray diffraction1.82003-08-19
51NUV|1|E+ 1NUV|1|F5'-R(*CP*GP*GP*AP*CP*CP*GP*AP*GP*CP*CP*AP*G)-3', 5'-R(*GP*CP*UP*GP*GP*GP*AP*GP*UP*CP*C)-3'The Leadzyme Ribozyme Bound to Mg(H2O)6(II) and Sr(II) at 1.8 A resolutionX-ray diffraction1.812003-08-19

Release history

Release3.0
Date2016-07-25

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child
NR_all_40908.1NR_2.0_32916.14.0(4) 1NUJ|1|C+1NUJ|1|D, 1NUJ|1|E+1NUJ|1|F, 1NUV|1|C+1NUV|1|D, 1NUV|1|E+1NUV|1|F(1) 429D|1|C+429D|1|D(4) 1NUV|1|A+1NUV|1|B, 1NUJ|1|G+1NUJ|1|H, 1NUJ|1|A+1NUJ|1|B, 1NUV|1|G+1NUV|1|H
NR_all_40908.1NR_2.5_32916.14.0(4) 1NUJ|1|C+1NUJ|1|D, 1NUJ|1|E+1NUJ|1|F, 1NUV|1|C+1NUV|1|D, 1NUV|1|E+1NUV|1|F(1) 429D|1|C+429D|1|D(4) 1NUV|1|A+1NUV|1|B, 1NUJ|1|G+1NUJ|1|H, 1NUJ|1|A+1NUJ|1|B, 1NUV|1|G+1NUV|1|H
NR_all_40908.1NR_20.0_32916.14.0(5) 1NUJ|1|C+1NUJ|1|D, 1NUJ|1|E+1NUJ|1|F, 1NUV|1|C+1NUV|1|D, 1NUV|1|E+1NUV|1|F, 429D|1|C+429D|1|D(0) (5) 1NUV|1|A+1NUV|1|B, 1NUJ|1|G+1NUJ|1|H, 1NUJ|1|A+1NUJ|1|B, 429D|1|A+429D|1|B, 1NUV|1|G+1NUV|1|H
NR_all_40908.1NR_3.0_32916.14.0(5) 1NUJ|1|E+1NUJ|1|F, 1NUV|1|C+1NUV|1|D, 1NUV|1|E+1NUV|1|F, 429D|1|C+429D|1|D, 1NUJ|1|C+1NUJ|1|D(0) (5) 429D|1|A+429D|1|B, 1NUV|1|G+1NUV|1|H, 1NUV|1|A+1NUV|1|B, 1NUJ|1|G+1NUJ|1|H, 1NUJ|1|A+1NUJ|1|B
NR_all_40908.1NR_3.5_32916.14.0(5) 1NUJ|1|C+1NUJ|1|D, 1NUJ|1|E+1NUJ|1|F, 1NUV|1|C+1NUV|1|D, 1NUV|1|E+1NUV|1|F, 429D|1|C+429D|1|D(0) (5) 1NUJ|1|A+1NUJ|1|B, 429D|1|A+429D|1|B, 1NUV|1|G+1NUV|1|H, 1NUV|1|A+1NUV|1|B, 1NUJ|1|G+1NUJ|1|H
NR_all_40908.1NR_4.0_32916.14.0(5) 1NUJ|1|C+1NUJ|1|D, 1NUJ|1|E+1NUJ|1|F, 1NUV|1|C+1NUV|1|D, 1NUV|1|E+1NUV|1|F, 429D|1|C+429D|1|D(0) (5) 1NUV|1|G+1NUV|1|H, 1NUV|1|A+1NUV|1|B, 1NUJ|1|G+1NUJ|1|H, 1NUJ|1|A+1NUJ|1|B, 429D|1|A+429D|1|B
NR_all_40908.1NR_all_32916.14.0(5) 1NUJ|1|C+1NUJ|1|D, 1NUJ|1|E+1NUJ|1|F, 1NUV|1|C+1NUV|1|D, 1NUV|1|E+1NUV|1|F, 429D|1|C+429D|1|D(0) (5) 1NUV|1|G+1NUV|1|H, 1NUV|1|A+1NUV|1|B, 1NUJ|1|G+1NUJ|1|H, 1NUJ|1|A+1NUJ|1|B, 429D|1|A+429D|1|B

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLengthNAKB_NA_annotationNAKB_protein_annotation
11NUV|1|E+1NUV|1|FTitle: The Leadzyme Ribozyme Bound to Mg(H2O)6(II) and Sr(II) at 1.8 A resolutionX-RAY DIFFRACTION1.8113
21NUV|1|C+1NUV|1|DTitle: The Leadzyme Ribozyme Bound to Mg(H2O)6(II) and Sr(II) at 1.8 A resolutionX-RAY DIFFRACTION1.8113
31NUJ|1|E+1NUJ|1|FTitle: THE LEADZYME STRUCTURE BOUND TO MG(H20)6(II) AT 1.8 A RESOLUTIONX-RAY DIFFRACTION1.813
41NUJ|1|C+1NUJ|1|DTitle: THE LEADZYME STRUCTURE BOUND TO MG(H20)6(II) AT 1.8 A RESOLUTIONX-RAY DIFFRACTION1.813
5429D|1|C+429D|1|DTitle: CRYSTAL STRUCTURE OF A LEADZYME; METAL BINDING AND IMPLICATIONS FOR CATALYSISX-RAY DIFFRACTION2.713

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