Equivalence class NR_all_32916.1 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 1NUJ|1|G+ 1NUJ|1|H (rep) | 5'-R(*CP*GP*GP*AP*CP*CP*GP*AP*GP*CP*CP*AP*G)-3', 5'-R(*GP*CP*UP*GP*GP*GP*AP*GP*UP*CP*C)-3' | THE LEADZYME STRUCTURE BOUND TO MG(H20)6(II) AT 1.8 A RESOLUTION | X-ray diffraction | 1.8 | 2003-08-19 | ||||
| 2 | 1NUV|1|A+ 1NUV|1|B | 5'-R(*CP*GP*GP*AP*CP*CP*GP*AP*GP*CP*CP*AP*G)-3', 5'-R(*GP*CP*UP*GP*GP*GP*AP*GP*UP*CP*C)-3' | The Leadzyme Ribozyme Bound to Mg(H2O)6(II) and Sr(II) at 1.8 A resolution | X-ray diffraction | 1.81 | 2003-08-19 | ||||
| 3 | 1NUJ|1|A+ 1NUJ|1|B | 5'-R(*CP*GP*GP*AP*CP*CP*GP*AP*GP*CP*CP*AP*G)-3', 5'-R(*GP*CP*UP*GP*GP*GP*AP*GP*UP*CP*C)-3' | THE LEADZYME STRUCTURE BOUND TO MG(H20)6(II) AT 1.8 A RESOLUTION | X-ray diffraction | 1.8 | 2003-08-19 | ||||
| 4 | 1NUV|1|G+ 1NUV|1|H | 5'-R(*CP*GP*GP*AP*CP*CP*GP*AP*GP*CP*CP*AP*G)-3', 5'-R(*GP*CP*UP*GP*GP*GP*AP*GP*UP*CP*C)-3' | The Leadzyme Ribozyme Bound to Mg(H2O)6(II) and Sr(II) at 1.8 A resolution | X-ray diffraction | 1.81 | 2003-08-19 | ||||
| 5 | 429D|1|A+ 429D|1|B | RNA (5'-R(*CP*GP*GP*AP*CP*CP*GP*AP*GP*CP*CP*AP*G)-3'), RNA (5'-R(*GP*CP*UP*GP*GP*GP*AP*GP*UP*CP*C)-3') | CRYSTAL STRUCTURE OF A LEADZYME; METAL BINDING AND IMPLICATIONS FOR CATALYSIS | X-ray diffraction | 2.7 | 1999-03-01 | ||||
| 6 | 429D|1|C+ 429D|1|D | RNA (5'-R(*CP*GP*GP*AP*CP*CP*GP*AP*GP*CP*CP*AP*G)-3'), RNA (5'-R(*GP*CP*UP*GP*GP*GP*AP*GP*UP*CP*C)-3') | CRYSTAL STRUCTURE OF A LEADZYME; METAL BINDING AND IMPLICATIONS FOR CATALYSIS | X-ray diffraction | 2.7 | 1999-03-01 | ||||
| 7 | 1NUJ|1|C+ 1NUJ|1|D | 5'-R(*CP*GP*GP*AP*CP*CP*GP*AP*GP*CP*CP*AP*G)-3', 5'-R(*GP*CP*UP*GP*GP*GP*AP*GP*UP*CP*C)-3' | THE LEADZYME STRUCTURE BOUND TO MG(H20)6(II) AT 1.8 A RESOLUTION | X-ray diffraction | 1.8 | 2003-08-19 | ||||
| 8 | 1NUV|1|C+ 1NUV|1|D | 5'-R(*CP*GP*GP*AP*CP*CP*GP*AP*GP*CP*CP*AP*G)-3', 5'-R(*GP*CP*UP*GP*GP*GP*AP*GP*UP*CP*C)-3' | The Leadzyme Ribozyme Bound to Mg(H2O)6(II) and Sr(II) at 1.8 A resolution | X-ray diffraction | 1.81 | 2003-08-19 | ||||
| 9 | 1NUV|1|E+ 1NUV|1|F | 5'-R(*CP*GP*GP*AP*CP*CP*GP*AP*GP*CP*CP*AP*G)-3', 5'-R(*GP*CP*UP*GP*GP*GP*AP*GP*UP*CP*C)-3' | The Leadzyme Ribozyme Bound to Mg(H2O)6(II) and Sr(II) at 1.8 A resolution | X-ray diffraction | 1.81 | 2003-08-19 | ||||
| 10 | 1NUJ|1|E+ 1NUJ|1|F | 5'-R(*CP*GP*GP*AP*CP*CP*GP*AP*GP*CP*CP*AP*G)-3', 5'-R(*GP*CP*UP*GP*GP*GP*AP*GP*UP*CP*C)-3' | THE LEADZYME STRUCTURE BOUND TO MG(H20)6(II) AT 1.8 A RESOLUTION | X-ray diffraction | 1.8 | 2003-08-19 |
Release history
| Release | 4.0 |
|---|---|
| Date | 2016-07-25 |
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
|---|---|---|---|---|---|
| NR_all_32916.1 | NR_all_40908.1 | 4.0 | (5) 1NUJ|1|E+1NUJ|1|F, 1NUJ|1|C+1NUJ|1|D, 429D|1|C+429D|1|D, 1NUV|1|E+1NUV|1|F, 1NUV|1|C+1NUV|1|D | (5) 1NUV|1|G+1NUV|1|H, 1NUV|1|A+1NUV|1|B, 1NUJ|1|G+1NUJ|1|H, 1NUJ|1|A+1NUJ|1|B, 429D|1|A+429D|1|B | (0) |
| NR_all_32916.1 | NR_all_77305.1 | 4.0 | (5) 1NUV|1|G+1NUV|1|H, 1NUV|1|A+1NUV|1|B, 1NUJ|1|G+1NUJ|1|H, 1NUJ|1|A+1NUJ|1|B, 429D|1|A+429D|1|B | (5) 1NUJ|1|C+1NUJ|1|D, 429D|1|C+429D|1|D, 1NUV|1|E+1NUV|1|F, 1NUV|1|C+1NUV|1|D, 1NUJ|1|E+1NUJ|1|F | (0) |
Children
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length | NAKB_NA_annotation | NAKB_protein_annotation |
|---|---|---|---|---|---|---|---|
| 1 | 1NUV|1|G+1NUV|1|H | Title: The Leadzyme Ribozyme Bound to Mg(H2O)6(II) and Sr(II) at 1.8 A resolution | X-RAY DIFFRACTION | 1.81 | 15 | ||
| 2 | 1NUV|1|A+1NUV|1|B | Title: The Leadzyme Ribozyme Bound to Mg(H2O)6(II) and Sr(II) at 1.8 A resolution | X-RAY DIFFRACTION | 1.81 | 15 | ||
| 3 | 1NUJ|1|G+1NUJ|1|H | Title: THE LEADZYME STRUCTURE BOUND TO MG(H20)6(II) AT 1.8 A RESOLUTION | X-RAY DIFFRACTION | 1.8 | 15 | ||
| 4 | 1NUJ|1|A+1NUJ|1|B | Title: THE LEADZYME STRUCTURE BOUND TO MG(H20)6(II) AT 1.8 A RESOLUTION | X-RAY DIFFRACTION | 1.8 | 15 | ||
| 5 | 429D|1|A+429D|1|B | Title: CRYSTAL STRUCTURE OF A LEADZYME; METAL BINDING AND IMPLICATIONS FOR CATALYSIS | X-RAY DIFFRACTION | 2.7 | 13 | ||
| 6 | 1NUV|1|C+1NUV|1|D | Title: The Leadzyme Ribozyme Bound to Mg(H2O)6(II) and Sr(II) at 1.8 A resolution | X-RAY DIFFRACTION | 1.81 | 13 | ||
| 7 | 1NUV|1|E+1NUV|1|F | Title: The Leadzyme Ribozyme Bound to Mg(H2O)6(II) and Sr(II) at 1.8 A resolution | X-RAY DIFFRACTION | 1.81 | 13 | ||
| 8 | 1NUJ|1|E+1NUJ|1|F | Title: THE LEADZYME STRUCTURE BOUND TO MG(H20)6(II) AT 1.8 A RESOLUTION | X-RAY DIFFRACTION | 1.8 | 13 | ||
| 9 | 1NUJ|1|C+1NUJ|1|D | Title: THE LEADZYME STRUCTURE BOUND TO MG(H20)6(II) AT 1.8 A RESOLUTION | X-RAY DIFFRACTION | 1.8 | 13 | ||
| 10 | 429D|1|C+429D|1|D | Title: CRYSTAL STRUCTURE OF A LEADZYME; METAL BINDING AND IMPLICATIONS FOR CATALYSIS | X-RAY DIFFRACTION | 2.7 | 13 |
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