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Equivalence class NR_all_35012.1 Obsolete

#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. ÅDate
14ALP|1|E (rep)HEXA URIDINEsynthetic constructSyntheticThe Lin28b Cold shock domain in complex with hexauridineX-ray diffraction1.482012-09-05

Release history

Release2.0
Date2014-12-05

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child
NR_all_35012.1NR_1.5_49787.13.0(1) 4ALP|1|E(0) (2) 3PEY|1|B, 3PEW|1|B
NR_all_35012.1NR_2.0_49787.13.0(1) 4ALP|1|E(0) (6) 3O8C|1|C, 5ELX|1|B, 3PF5|1|S, 3PF5|1|R, 3PEY|1|B, 3PEW|1|B
NR_all_35012.1NR_2.5_49787.13.0(1) 4ALP|1|E(0) (13) 5BTE|1|C, 3PF5|1|S, 3PF5|1|R, 3PEY|1|B, 3PEW|1|B, 3O8R|1|C, 3O8C|1|C, 3EX7|1|J, 3EX7|1|F, 2HYI|1|L, 2HYI|1|F, 5ELX|1|B, 5BTE|1|D
NR_all_35012.1NR_20.0_49787.13.0(1) 4ALP|1|E(0) (18) 4Y91|1|N, 4NL3|1|Z, 4NL3|1|R, 3PF5|1|S, 3PF5|1|R, 3PEY|1|B, 3PEW|1|B, 3O8R|1|C, 3O8C|1|C, 3EX7|1|J, 3EX7|1|F, 2HYI|1|L, 5ELX|1|B, 2HYI|1|F, 5BTE|1|D, 1N34|1|Z, 5BTE|1|C, 4Y91|1|O
NR_all_35012.1NR_3.0_49787.13.0(1) 4ALP|1|E(0) (15) 4Y91|1|O, 4Y91|1|N, 3PF5|1|S, 3PF5|1|R, 3PEY|1|B, 3PEW|1|B, 3O8R|1|C, 3O8C|1|C, 3EX7|1|J, 3EX7|1|F, 2HYI|1|L, 2HYI|1|F, 5ELX|1|B, 5BTE|1|D, 5BTE|1|C
NR_all_35012.1NR_3.5_49787.13.0(1) 4ALP|1|E(0) (17) 4Y91|1|N, 4NL3|1|Z, 4NL3|1|R, 3PF5|1|S, 3PF5|1|R, 3PEY|1|B, 3PEW|1|B, 3O8R|1|C, 3O8C|1|C, 3EX7|1|J, 3EX7|1|F, 2HYI|1|L, 2HYI|1|F, 5ELX|1|B, 5BTE|1|D, 5BTE|1|C, 4Y91|1|O
NR_all_35012.1NR_4.0_49787.13.0(1) 4ALP|1|E(0) (18) 4NL3|1|R, 3PF5|1|S, 3PF5|1|R, 3PEY|1|B, 3PEW|1|B, 3O8R|1|C, 3O8C|1|C, 3EX7|1|J, 3EX7|1|F, 2HYI|1|L, 2HYI|1|F, 5ELX|1|B, 1N34|1|Z, 5BTE|1|D, 5BTE|1|C, 4Y91|1|O, 4Y91|1|N, 4NL3|1|Z
NR_all_35012.1NR_all_49787.13.0(1) 4ALP|1|E(0) (18) 3PF5|1|R, 3PEY|1|B, 3PEW|1|B, 3O8R|1|C, 3O8C|1|C, 3EX7|1|J, 3EX7|1|F, 2HYI|1|L, 2HYI|1|F, 5ELX|1|B, 1N34|1|Z, 5BTE|1|D, 5BTE|1|C, 4Y91|1|O, 4Y91|1|N, 4NL3|1|Z, 4NL3|1|R, 3PF5|1|S

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLengthNAKB_NA_annotationNAKB_protein_annotation
14ALP|1|ETitle: The Lin28b Cold shock domain in complex with hexauridineX-RAY DIFFRACTION1.486

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