#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. ÅDate
11ZX7|1|C+ 1ZX7|1|E+ 1ZX7|1|D+ 1ZX7|1|F (rep)5'-R(*GP*UP*GP*GP*UP*GP*AP*AP*GP*UP*CP*GP*CP*GP*G)-3', 5'-R(*CP*GP*CP*GP*UP*CP*AP*CP*AP*CP*CP*AP*CP*C)-3'Molecular Recognition of RNA by Neomycin and a Restricted Neomycin DerivativeX-ray diffraction2.152005-09-20
22A04|1|A+ 2A04|1|C+ 2A04|1|B+ 2A04|1|D5'-R(*GP*UP*GP*GP*UP*GP*AP*AP*GP*UP*CP*GP*CP*GP*G)-3', 5'-R(*CP*GP*CP*GP*UP*CP*AP*CP*AP*CP*CP*AP*CP*C)-3'Molecular Recognition of RNA by Neomycin and a Restricted Neomycin DerivativeX-ray diffraction2.952005-09-20
31ZZ5|1|A+ 1ZZ5|1|C+ 1ZZ5|1|B+ 1ZZ5|1|D5'-R(*GP*UP*GP*GP*UP*GP*AP*AP*GP*UP*CP*GP*CP*GP*G)-3', 5'-R(*CP*GP*CP*GP*UP*CP*AP*CP*AP*CP*CP*AP*CP*C)-3'Molecular Recognition of RNA by Neomycin and a Restricted Neomycin DerivativeX-ray diffraction32005-09-20
41ZX7|1|A+ 1ZX7|1|G+ 1ZX7|1|B+ 1ZX7|1|H5'-R(*GP*UP*GP*GP*UP*GP*AP*AP*GP*UP*CP*GP*CP*GP*G)-3', 5'-R(*CP*GP*CP*GP*UP*CP*AP*CP*AP*CP*CP*AP*CP*C)-3'Molecular Recognition of RNA by Neomycin and a Restricted Neomycin DerivativeX-ray diffraction2.152005-09-20

Release history

Release4.0
Date2016-07-25

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child
NR_all_28066.1NR_2.5_23933.15.0(2) 1ZX7|1|A+1ZX7|1|G+1ZX7|1|B+1ZX7|1|H, 1ZX7|1|C+1ZX7|1|E+1ZX7|1|D+1ZX7|1|F(2) 2A04|1|A+2A04|1|C+2A04|1|B+2A04|1|D, 1ZZ5|1|A+1ZZ5|1|C+1ZZ5|1|B+1ZZ5|1|D(0)
NR_all_28066.1NR_20.0_23933.15.0(2) 1ZX7|1|C+1ZX7|1|E+1ZX7|1|D+1ZX7|1|F, 1ZX7|1|A+1ZX7|1|G+1ZX7|1|B+1ZX7|1|H(2) 1ZZ5|1|A+1ZZ5|1|C+1ZZ5|1|B+1ZZ5|1|D, 2A04|1|A+2A04|1|C+2A04|1|B+2A04|1|D(0)
NR_all_28066.1NR_20.0_85712.15.0(2) 1ZZ5|1|A+1ZZ5|1|C+1ZZ5|1|B+1ZZ5|1|D, 2A04|1|A+2A04|1|C+2A04|1|B+2A04|1|D(2) 1ZX7|1|A+1ZX7|1|G+1ZX7|1|B+1ZX7|1|H, 1ZX7|1|C+1ZX7|1|E+1ZX7|1|D+1ZX7|1|F(0)
NR_all_28066.1NR_3.0_23933.15.0(2) 1ZX7|1|A+1ZX7|1|G+1ZX7|1|B+1ZX7|1|H, 1ZX7|1|C+1ZX7|1|E+1ZX7|1|D+1ZX7|1|F(2) 2A04|1|A+2A04|1|C+2A04|1|B+2A04|1|D, 1ZZ5|1|A+1ZZ5|1|C+1ZZ5|1|B+1ZZ5|1|D(0)
NR_all_28066.1NR_3.0_85712.15.0(2) 1ZZ5|1|A+1ZZ5|1|C+1ZZ5|1|B+1ZZ5|1|D, 2A04|1|A+2A04|1|C+2A04|1|B+2A04|1|D(2) 1ZX7|1|C+1ZX7|1|E+1ZX7|1|D+1ZX7|1|F, 1ZX7|1|A+1ZX7|1|G+1ZX7|1|B+1ZX7|1|H(0)
NR_all_28066.1NR_3.5_23933.15.0(2) 1ZX7|1|C+1ZX7|1|E+1ZX7|1|D+1ZX7|1|F, 1ZX7|1|A+1ZX7|1|G+1ZX7|1|B+1ZX7|1|H(2) 1ZZ5|1|A+1ZZ5|1|C+1ZZ5|1|B+1ZZ5|1|D, 2A04|1|A+2A04|1|C+2A04|1|B+2A04|1|D(0)
NR_all_28066.1NR_3.5_85712.15.0(2) 1ZZ5|1|A+1ZZ5|1|C+1ZZ5|1|B+1ZZ5|1|D, 2A04|1|A+2A04|1|C+2A04|1|B+2A04|1|D(2) 1ZX7|1|A+1ZX7|1|G+1ZX7|1|B+1ZX7|1|H, 1ZX7|1|C+1ZX7|1|E+1ZX7|1|D+1ZX7|1|F(0)
NR_all_28066.1NR_4.0_23933.15.0(2) 1ZX7|1|A+1ZX7|1|G+1ZX7|1|B+1ZX7|1|H, 1ZX7|1|C+1ZX7|1|E+1ZX7|1|D+1ZX7|1|F(2) 2A04|1|A+2A04|1|C+2A04|1|B+2A04|1|D, 1ZZ5|1|A+1ZZ5|1|C+1ZZ5|1|B+1ZZ5|1|D(0)
NR_all_28066.1NR_4.0_85712.15.0(2) 1ZZ5|1|A+1ZZ5|1|C+1ZZ5|1|B+1ZZ5|1|D, 2A04|1|A+2A04|1|C+2A04|1|B+2A04|1|D(2) 1ZX7|1|C+1ZX7|1|E+1ZX7|1|D+1ZX7|1|F, 1ZX7|1|A+1ZX7|1|G+1ZX7|1|B+1ZX7|1|H(0)
NR_all_28066.1NR_all_23933.15.0(2) 1ZX7|1|C+1ZX7|1|E+1ZX7|1|D+1ZX7|1|F, 1ZX7|1|A+1ZX7|1|G+1ZX7|1|B+1ZX7|1|H(2) 1ZZ5|1|A+1ZZ5|1|C+1ZZ5|1|B+1ZZ5|1|D, 2A04|1|A+2A04|1|C+2A04|1|B+2A04|1|D(0)
NR_all_28066.1NR_all_85712.15.0(2) 1ZZ5|1|A+1ZZ5|1|C+1ZZ5|1|B+1ZZ5|1|D, 2A04|1|A+2A04|1|C+2A04|1|B+2A04|1|D(2) 1ZX7|1|A+1ZX7|1|G+1ZX7|1|B+1ZX7|1|H, 1ZX7|1|C+1ZX7|1|E+1ZX7|1|D+1ZX7|1|F(0)

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLengthNAKB_NA_annotationNAKB_protein_annotation
12A04|1|A+2A04|1|C+2A04|1|B+2A04|1|DTitle: Molecular Recognition of RNA by Neomycin and a Restricted Neomycin DerivativeX-RAY DIFFRACTION2.9515
21ZZ5|1|A+1ZZ5|1|C+1ZZ5|1|B+1ZZ5|1|DTitle: Molecular Recognition of RNA by Neomycin and a Restricted Neomycin DerivativeX-RAY DIFFRACTION315
31ZX7|1|C+1ZX7|1|E+1ZX7|1|D+1ZX7|1|FTitle: Molecular Recognition of RNA by Neomycin and a Restricted Neomycin DerivativeX-RAY DIFFRACTION2.1515
41ZX7|1|A+1ZX7|1|G+1ZX7|1|B+1ZX7|1|HTitle: Molecular Recognition of RNA by Neomycin and a Restricted Neomycin DerivativeX-RAY DIFFRACTION2.1515

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