Equivalence class NR_all_14513.1 Obsolete
# | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
---|---|---|---|---|---|---|---|---|---|---|
1 | 3U2E|1|D (rep) | RNA (5'-R(P*GP*G)-3') | EAL domain of phosphodiesterase PdeA in complex with 5'-pGpG and Mg++ | X-ray diffraction | 2.32 | 2011-10-12 |
Release history
Release | 2.0 |
---|---|
Date | 2014-12-05 |
Parents
This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
---|
Children
This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
---|---|---|---|---|---|
NR_all_14513.1 | NR_2.5_18031.1 | 3.0 | (1) 3U2E|1|D | (0) | (6) 4AFY|1|D, 4AFY|1|C, 3U2E|1|C, 1UVK|1|F, 1UVK|1|D, 1UVK|1|B |
NR_all_14513.1 | NR_20.0_18031.1 | 3.0 | (1) 3U2E|1|D | (0) | (8) 4LQ3|1|R, 4AFY|1|D, 4AFY|1|C, 3U2E|1|C, 1UVK|1|F, 1UVK|1|D, 1UVK|1|B, 4X4U|1|H |
NR_all_14513.1 | NR_3.0_18031.1 | 3.0 | (1) 3U2E|1|D | (0) | (8) 4X4U|1|H, 4LQ3|1|R, 4AFY|1|D, 4AFY|1|C, 3U2E|1|C, 1UVK|1|F, 1UVK|1|D, 1UVK|1|B |
NR_all_14513.1 | NR_3.5_18031.1 | 3.0 | (1) 3U2E|1|D | (0) | (8) 4LQ3|1|R, 4AFY|1|D, 4AFY|1|C, 3U2E|1|C, 1UVK|1|F, 1UVK|1|D, 1UVK|1|B, 4X4U|1|H |
NR_all_14513.1 | NR_4.0_18031.1 | 3.0 | (1) 3U2E|1|D | (0) | (8) 4X4U|1|H, 4LQ3|1|R, 4AFY|1|D, 4AFY|1|C, 3U2E|1|C, 1UVK|1|F, 1UVK|1|D, 1UVK|1|B |
NR_all_14513.1 | NR_all_18031.1 | 3.0 | (1) 3U2E|1|D | (0) | (8) 4LQ3|1|R, 4AFY|1|D, 4AFY|1|C, 3U2E|1|C, 1UVK|1|F, 1UVK|1|D, 1UVK|1|B, 4X4U|1|H |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).#S | PDB | Title | Method | Resolution | Length | NAKB_NA_annotation | NAKB_protein_annotation |
---|---|---|---|---|---|---|---|
1 | 3U2E|1|D | Title: EAL domain of phosphodiesterase PdeA in complex with 5'-pGpG and Mg++ | X-RAY DIFFRACTION | 2.32 | 2 |
Coloring options: