Equivalence class NR_4.0_93338.1 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 3SQW|1|B (rep) | RNA (5'-R(P*UP*UP*UP*UP*UP*UP*UP*UP*UP*U)-3') | Structure of Mss116p (NTE deletion) bound to ssRNA and AMP-PNP | X-ray diffraction | 1.91 | 2011-10-12 | ||||
| 2 | 3SQX|1|B | RNA (5'-R(*UP*UP*UP*UP*UP*UP*UP*UP*UP*U)-3') | Structure of Mss116p (NTE and C-tail double deletion) bound to ssRNA and AMP-PNP | X-ray diffraction | 2.11 | 2011-10-12 |
Release history
| Release | 5.0 |
|---|---|
| Date | 2016-07-25 |
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
|---|---|---|---|---|---|
| NR_4.0_93338.1 | NR_all_04072.1 | 5.0 | (2) 3SQX|1|B, 3SQW|1|B | (0) | (28) 4OQ9|1|l, 4NIA|1|s, 4NIA|1|r, 4NIA|1|l, 4NIA|1|k, 3I61|1|B, 3I5Y|1|B, 2DB3|1|H, 2DB3|1|G, 4OQ9|1|q, 4OQ9|1|p, 4OQ9|1|j, 4OQ9|1|f, 4NIA|1|p, 4NIA|1|o, 4NIA|1|f, 3I62|1|B, 3FHT|1|D, 3FHT|1|C, 2DB3|1|E, 4OQ9|1|s, 4OQ9|1|r, 4OQ9|1|k, 4NIA|1|q, 4NIA|1|j, 3I5X|1|B, 2DB3|1|F, 4OQ9|1|o |
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
|---|---|---|---|---|---|
| NR_4.0_93338.1 | NR_4.0_85258.1 | 6.0 | (1) 3SQW|1|B | (1) 3SQX|1|B | (0) |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length | NAKB_NA_annotation | NAKB_protein_annotation |
|---|---|---|---|---|---|---|---|
| 1 | 3SQW|1|B | Title: Structure of Mss116p (NTE deletion) bound to ssRNA and AMP-PNP | X-RAY DIFFRACTION | 1.91 | 8 | ||
| 2 | 3SQX|1|B | Title: Structure of Mss116p (NTE and C-tail double deletion) bound to ssRNA and AMP-PNP | X-RAY DIFFRACTION | 2.11 | 8 |
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