NR_4.0_91789.1

Members (99)
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#	IFE	Standardized name	Molecule	Organism	Source	Rfam	Title	Method	Res. Å	Date
1	4U26\|1\|BB (rep)	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Crystal structure of the E. coli ribosome bound to dalfopristin and quinupristin.	X-ray diffraction	2.8	2014-07-30
2	5AFI\|1\|B	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	2.9A Structure of E. coli ribosome-EF-TU complex by cs-corrected cryo-EM	Electron microscopy	2.9	2015-03-11
3	5J88\|1\|DB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Structure of the E coli 70S ribosome with the U1060A mutation in 16S rRNA	X-ray diffraction	3.32	2016-07-06
4	3J9Y\|1\|B	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	Cryo-EM structure of tetracycline resistance protein TetM bound to a translating E.coli ribosome	Electron microscopy	3.9	2015-04-15
5	4U20\|1\|DB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Crystal structure of the E. coli ribosome bound to flopristin.	X-ray diffraction	2.9	2014-07-30
6	4WWW\|1\|RB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Crystal structure of the E. coli ribosome bound to CEM-101	X-ray diffraction	3.1	2014-12-24
7	4U27\|1\|BB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Crystal structure of the E. coli ribosome bound to flopristin and linopristin.	X-ray diffraction	2.8	2014-07-30
8	4U24\|1\|BB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Crystal structure of the E. coli ribosome bound to dalfopristin.	X-ray diffraction	2.9	2014-07-30
9	4WF1\|1\|BB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Crystal structure of the E. coli ribosome bound to negamycin.	X-ray diffraction	3.09	2014-11-05
10	4V6E\|1\|DB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Crystal structure of the E. coli 70S ribosome in an intermediate state of ratcheting	X-ray diffraction	3.71	2014-07-09
11	4V6D\|1\|DB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Crystal structure of the E. coli 70S ribosome in an intermediate state of ratcheting	X-ray diffraction	3.81	2014-07-09
12	4YBB\|1\|DB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	High-resolution structure of the Escherichia coli ribosome	X-ray diffraction	2.1	2015-03-18
13	5J8A\|1\|DB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Structure of the E coli 70S ribosome with the U1052G mutation in 16S rRNA bound to tigecycline	X-ray diffraction	3.1	2016-07-06
14	4U1U\|1\|DB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Crystal structure of the E. coli ribosome bound to quinupristin.	X-ray diffraction	2.95	2014-07-30
15	4V7T\|1\|BB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Crystal structure of the E. coli ribosome bound to chloramphenicol.	X-ray diffraction	3.19	2014-07-09
16	4V7V\|1\|BB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Crystal structure of the E. coli ribosome bound to clindamycin.	X-ray diffraction	3.29	2014-07-09
17	5J88\|1\|CB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Structure of the E coli 70S ribosome with the U1060A mutation in 16S rRNA	X-ray diffraction	3.32	2016-07-06
18	4V6D\|1\|BB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Crystal structure of the E. coli 70S ribosome in an intermediate state of ratcheting	X-ray diffraction	3.81	2014-07-09
19	4U25\|1\|BB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Crystal structure of the E. coli ribosome bound to virginiamycin M1.	X-ray diffraction	2.9	2014-07-30
20	4U1U\|1\|BB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Crystal structure of the E. coli ribosome bound to quinupristin.	X-ray diffraction	2.95	2014-07-30
21	4U1V\|1\|BB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Crystal structure of the E. coli ribosome bound to linopristin.	X-ray diffraction	3	2014-07-30
22	4V9C\|1\|DB	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	Allosteric control of the ribosome by small-molecule antibiotics	X-ray diffraction	3.3	2014-07-09
23	4V6C\|1\|DB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Crystal structure of the E. coli 70S ribosome in an intermediate state of ratcheting	X-ray diffraction	3.19	2014-07-09
24	4V56\|1\|DA	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Crystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin.	X-ray diffraction	3.93	2014-07-09
25	4V56\|1\|BA	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Crystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin.	X-ray diffraction	3.93	2014-07-09
26	5J91\|1\|DB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Structure of the Wild-type 70S E coli ribosome bound to Tigecycline	X-ray diffraction	2.96	2016-07-06
27	5JC9\|1\|DB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Structure of the Escherichia coli ribosome with the U1052G mutation in the 16S rRNA	X-ray diffraction	3.03	2016-07-06
28	5GAG\|1\|B	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	RNC in complex with SRP-SR in the closed state	Electron microscopy	3.8	2016-01-27
29	5IQR\|1\|3	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Structure of RelA bound to the 70S ribosome	Electron microscopy	3	2016-05-04
30	4V6C\|1\|BB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Crystal structure of the E. coli 70S ribosome in an intermediate state of ratcheting	X-ray diffraction	3.19	2014-07-09
31	4V7S\|1\|BB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Crystal structure of the E. coli ribosome bound to telithromycin.	X-ray diffraction	3.25	2014-07-09
32	5JU8\|1\|BB	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	Cryo-EM structure of an ErmBL-stalled ribosome in complex with P-, and E-tRNA	Electron microscopy	3.6	2016-07-20
33	4U20\|1\|BB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Crystal structure of the E. coli ribosome bound to flopristin.	X-ray diffraction	2.9	2014-07-30
34	4V9D\|1\|CB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Structures of the bacterial ribosome in classical and hybrid states of tRNA binding	X-ray diffraction	3	2014-07-09
35	4V50\|1\|DA	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	Crystal Structure of Ribosome with messenger RNA and the Anticodon stem-loop of P-site tRNA.	X-ray diffraction	3.22	2014-07-09
36	4V50\|1\|BA	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	Crystal Structure of Ribosome with messenger RNA and the Anticodon stem-loop of P-site tRNA.	X-ray diffraction	3.22	2014-07-09
37	4V7S\|1\|DB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Crystal structure of the E. coli ribosome bound to telithromycin.	X-ray diffraction	3.25	2014-07-09
38	4V54\|1\|DA	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Crystal structure of the bacterial ribosome from Escherichia coli in complex with ribosome recycling factor (RRF).	X-ray diffraction	3.3	2014-07-09
39	4V54\|1\|BA	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Crystal structure of the bacterial ribosome from Escherichia coli in complex with ribosome recycling factor (RRF).	X-ray diffraction	3.3	2014-07-09
40	4V55\|1\|DA	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Crystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin and ribosome recycling factor (RRF).	X-ray diffraction	4	2014-07-09
41	4V55\|1\|BA	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Crystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin and ribosome recycling factor (RRF).	X-ray diffraction	4	2014-07-09
42	3J9Z\|1\|LB	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	Activation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor G	Electron microscopy	3.6	2015-07-01
43	5GAD\|1\|B	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	RNC-SRP-SR complex early state	Electron microscopy	3.7	2016-01-27
44	5GAH\|1\|B	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	RNC in complex with SRP with detached NG domain	Electron microscopy	3.8	2016-01-27
45	4YBB\|1\|CB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	High-resolution structure of the Escherichia coli ribosome	X-ray diffraction	2.1	2015-03-18
46	4U27\|1\|DB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Crystal structure of the E. coli ribosome bound to flopristin and linopristin.	X-ray diffraction	2.8	2014-07-30
47	4V9P\|1\|CB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Control of ribosomal subunit rotation by elongation factor G	X-ray diffraction	2.9	2014-07-09
48	4U25\|1\|DB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Crystal structure of the E. coli ribosome bound to virginiamycin M1.	X-ray diffraction	2.9	2014-07-30
49	5J91\|1\|CB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Structure of the Wild-type 70S E coli ribosome bound to Tigecycline	X-ray diffraction	2.96	2016-07-06
50	4V9D\|1\|DB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Structures of the bacterial ribosome in classical and hybrid states of tRNA binding	X-ray diffraction	3	2014-07-09
51	4WF1\|1\|DB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Crystal structure of the E. coli ribosome bound to negamycin.	X-ray diffraction	3.09	2014-11-05
52	5J8A\|1\|CB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Structure of the E coli 70S ribosome with the U1052G mutation in 16S rRNA bound to tigecycline	X-ray diffraction	3.1	2016-07-06
53	4V7U\|1\|BB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Crystal structure of the E. coli ribosome bound to erythromycin.	X-ray diffraction	3.1	2014-07-09
54	4V6E\|1\|BB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Crystal structure of the E. coli 70S ribosome in an intermediate state of ratcheting	X-ray diffraction	3.71	2014-07-09
55	4WOI\|1\|BB	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	4,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2	X-ray diffraction	3	2015-08-05
56	4V7T\|1\|DB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Crystal structure of the E. coli ribosome bound to chloramphenicol.	X-ray diffraction	3.19	2014-07-09
57	4V64\|1\|DA	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	Crystal structure of the bacterial ribosome from Escherichia coli in complex with hygromycin B.	X-ray diffraction	3.5	2014-07-09
58	4V64\|1\|BA	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	Crystal structure of the bacterial ribosome from Escherichia coli in complex with hygromycin B.	X-ray diffraction	3.5	2014-07-09
59	5GAE\|1\|B	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	RNC in complex with a translocating SecYEG	Electron microscopy	3.33	2016-01-27
60	4V9O\|1\|AB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Control of ribosomal subunit rotation by elongation factor G	X-ray diffraction	2.9	2014-07-09
61	4U24\|1\|DB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Crystal structure of the E. coli ribosome bound to dalfopristin.	X-ray diffraction	2.9	2014-07-30
62	4WOI\|1\|CB	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	4,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2	X-ray diffraction	3	2015-08-05
63	4U1V\|1\|DB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Crystal structure of the E. coli ribosome bound to linopristin.	X-ray diffraction	3	2014-07-30
64	5JC9\|1\|CB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Structure of the Escherichia coli ribosome with the U1052G mutation in the 16S rRNA	X-ray diffraction	3.03	2016-07-06
65	5JTE\|1\|BB	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	Cryo-EM structure of an ErmBL-stalled ribosome in complex with A-, P-, and E-tRNA	Electron microscopy	3.6	2016-07-20
66	4UY8\|1\|B	5S ribosomal RNA	RRNA-5S RIBOSOMAL RNA	Escherichia coli	Bacteria	RF00001	Molecular basis for the ribosome functioning as a L-tryptophan sensor - Cryo-EM structure of a TnaC stalled E.coli ribosome	Electron microscopy	3.8	2014-10-29
67	3J7Z\|1\|B	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Structure of the E. coli 50S subunit with ErmCL nascent chain	Electron microscopy	3.9	2014-10-22
68	4V52\|1\|DA	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Crystal structure of the bacterial ribosome from Escherichia coli in complex with neomycin.	X-ray diffraction	3.21	2014-07-09
69	4V52\|1\|BA	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Crystal structure of the bacterial ribosome from Escherichia coli in complex with neomycin.	X-ray diffraction	3.21	2014-07-09
70	4V4Q\|1\|DA	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	Crystal structure of the bacterial ribosome from Escherichia coli at 3.5 A resolution.	X-ray diffraction	3.46	2014-07-09
71	4V4Q\|1\|BA	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	Crystal structure of the bacterial ribosome from Escherichia coli at 3.5 A resolution.	X-ray diffraction	3.46	2014-07-09
72	4V4H\|1\|DA	5S ribosomal RNA	5S RIBOSOMAL RNA	Escherichia coli	Bacteria	RF00001	Crystal structure of the bacterial ribosome from Escherichia coli in complex with the antibiotic kasugamyin at 3.5A resolution.	X-ray diffraction	3.46	2014-07-09
73	4V4H\|1\|BA	5S ribosomal RNA	5S RIBOSOMAL RNA	Escherichia coli	Bacteria	RF00001	Crystal structure of the bacterial ribosome from Escherichia coli in complex with the antibiotic kasugamyin at 3.5A resolution.	X-ray diffraction	3.46	2014-07-09
74	4V57\|1\|DA	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Crystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin and neomycin.	X-ray diffraction	3.5	2014-07-09
75	4V57\|1\|BA	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Crystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin and neomycin.	X-ray diffraction	3.5	2014-07-09
76	4V53\|1\|DA	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Crystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin.	X-ray diffraction	3.54	2014-07-09
77	4V53\|1\|BA	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Crystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin.	X-ray diffraction	3.54	2014-07-09
78	3JA1\|1\|LB	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	Activation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor G	Electron microscopy	3.6	2015-07-01
79	4U26\|1\|DB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Crystal structure of the E. coli ribosome bound to dalfopristin and quinupristin.	X-ray diffraction	2.8	2014-07-30
80	4V9O\|1\|CB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Control of ribosomal subunit rotation by elongation factor G	X-ray diffraction	2.9	2014-07-09
81	4V85\|1\|BB	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	Crystal Structure of Release Factor RF3 Trapped in the GTP State on a Rotated Conformation of the Ribosome.	X-ray diffraction	3.2	2014-07-09
82	4WWW\|1\|YB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Crystal structure of the E. coli ribosome bound to CEM-101	X-ray diffraction	3.1	2014-12-24
83	4V7V\|1\|DB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Crystal structure of the E. coli ribosome bound to clindamycin.	X-ray diffraction	3.29	2014-07-09
84	4V9P\|1\|EB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Control of ribosomal subunit rotation by elongation factor G	X-ray diffraction	2.9	2014-07-09
85	4V9P\|1\|AB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Control of ribosomal subunit rotation by elongation factor G	X-ray diffraction	2.9	2014-07-09
86	4V9O\|1\|EB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Control of ribosomal subunit rotation by elongation factor G	X-ray diffraction	2.9	2014-07-09
87	3JCJ\|1\|0	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	Structures of ribosome-bound initiation factor 2 reveal the mechanism of subunit association	Electron microscopy	3.7	2016-03-09
88	3JCD\|1\|B	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	Structure of Escherichia coli EF4 in posttranslocational ribosomes (Post EF4)	Electron microscopy	3.7	2016-01-13
89	4V89\|1\|BB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Crystal Structure of Release Factor RF3 Trapped in the GTP State on a Rotated Conformation of the Ribosome (without viomycin)	X-ray diffraction	3.7	2014-07-09
90	4V9P\|1\|GB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Control of ribosomal subunit rotation by elongation factor G	X-ray diffraction	2.9	2014-07-09
91	4V9O\|1\|GB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Control of ribosomal subunit rotation by elongation factor G	X-ray diffraction	2.9	2014-07-09
92	3JCE\|1\|B	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	Structure of Escherichia coli EF4 in pretranslocational ribosomes (Pre EF4)	Electron microscopy	3.2	2016-01-13
93	4V7U\|1\|DB	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Crystal structure of the E. coli ribosome bound to erythromycin.	X-ray diffraction	3.1	2014-07-09
94	3JBV\|1\|a	5S ribosomal RNA	RNA (118-MER)	Escherichia coli	Bacteria	RF00001	Mechanisms of Ribosome Stalling by SecM at Multiple Elongation Steps	Electron microscopy	3.32	2016-01-27
95	5L3P\|1\|B	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	Cryo-EM structure of stringent response factor RelA bound to ErmCL-stalled ribosome complex	Electron microscopy	3.7	2016-07-20
96	3JBU\|1\|a	5S ribosomal RNA	5S rRNA	Escherichia coli	Bacteria	RF00001	Mechanisms of Ribosome Stalling by SecM at Multiple Elongation Steps	Electron microscopy	3.64	2016-01-27
97	4V9C\|1\|BB	5S ribosomal RNA	5S ribosomal RNA	Escherichia coli	Bacteria	RF00001	Allosteric control of the ribosome by small-molecule antibiotics	X-ray diffraction	3.3	2014-07-09
98	4V5B\|1\|CA	5S ribosomal RNA	5S RIBOSOMAL RNA	Escherichia coli	Bacteria	RF00001	Structure of PDF binding helix in complex with the ribosome	X-ray diffraction	3.74	2014-07-09
99	4V5B\|1\|AA	5S ribosomal RNA	5S RIBOSOMAL RNA	Escherichia coli	Bacteria	RF00001	Structure of PDF binding helix in complex with the ribosome	X-ray diffraction	3.74	2014-07-09

Release history

Release	7.0
Date	2017-04-05

Parents

This class	Parent classes	Release id	Intersection	Added to this class	Only in parent
NR_4.0_91789.1	NR_4.0_16968.1	7.0	(23) 4V6E\|1\|DB, 5GAD\|1\|B, 3JCD\|1\|B, 5J88\|1\|DB, 4UY8\|1\|B, 5JU8\|1\|BB, 4V50\|1\|DA, 4V85\|1\|BB, 5IQR\|1\|3, 5J91\|1\|DB, 3JBU\|1\|a, 3JCE\|1\|B, 4V4Q\|1\|BA, 5L3P\|1\|B, 4V6E\|1\|BB, 5AFI\|1\|B, 3JBV\|1\|a, 3JCJ\|1\|0, 5JTE\|1\|BB, 4V50\|1\|BA, 5J91\|1\|CB, 5J88\|1\|CB, 4V4Q\|1\|DA	(76) 4U24\|1\|BB, 4V7S\|1\|BB, 4U25\|1\|BB, 5J8A\|1\|CB, 4V7U\|1\|BB, 4V55\|1\|BA, 3J7Z\|1\|B, 4V57\|1\|BA, 4WF1\|1\|DB, 4U27\|1\|BB, 4U1U\|1\|BB, 4V64\|1\|BA, 4WWW\|1\|YB, 4V89\|1\|BB, 4V52\|1\|BA, 4V9D\|1\|DB, 4U1V\|1\|BB, 4V54\|1\|BA, 4V9O\|1\|GB, 4V6D\|1\|BB, 4V7T\|1\|BB, 4V56\|1\|BA, 4V9P\|1\|CB, 4V7V\|1\|BB, 4V5B\|1\|AA, 4V4H\|1\|BA, 4V6C\|1\|BB, 4V53\|1\|BA, 4U20\|1\|BB, 5GAG\|1\|B, 5JC9\|1\|CB, 4V9P\|1\|GB, 3J9Z\|1\|LB, 4WOI\|1\|CB, 4V9C\|1\|DB, 4YBB\|1\|DB, 4V9O\|1\|CB, 4U20\|1\|DB, 4V6D\|1\|DB, 4U24\|1\|DB, 5GAH\|1\|B, 4V7T\|1\|DB, 4V54\|1\|DA, 5JC9\|1\|DB, 4V56\|1\|DA, 4WF1\|1\|BB, 4U26\|1\|DB, 3JA1\|1\|LB, 4V5B\|1\|CA, 4WWW\|1\|RB, 4V7V\|1\|DB, 4V4H\|1\|DA, 4V9D\|1\|CB, 4U1U\|1\|DB, 4V53\|1\|DA, 4V9O\|1\|EB, 4V6C\|1\|DB, 4V7S\|1\|DB, 4V55\|1\|DA, 4V9P\|1\|AB, 4V7U\|1\|DB, 4V57\|1\|DA, 4U27\|1\|DB, 4V64\|1\|DA, 4V52\|1\|DA, 4U1V\|1\|DB, 5GAE\|1\|B, 5J8A\|1\|DB, 4V9P\|1\|EB, 3J9Y\|1\|B, 4WOI\|1\|BB, 4V9C\|1\|BB, 4YBB\|1\|CB, 4V9O\|1\|AB, 4U26\|1\|BB, 4U25\|1\|DB	(0)

Children

This class	Descendant classes	Release id	Intersection	Only in this class	Added to child
NR_4.0_91789.1	NR_4.0_07547.1	8.0	(99) 4UY8\|1\|B, 4V7S\|1\|DB, 5GAD\|1\|B, 4V5B\|1\|AA, 4V9P\|1\|EB, 4U1V\|1\|DB, 4V52\|1\|DA, 4V89\|1\|BB, 4U26\|1\|DB, 5J8A\|1\|DB, 3J9Y\|1\|B, 4V6E\|1\|BB, 4YBB\|1\|CB, 4V56\|1\|DA, 4V9O\|1\|GB, 4V4Q\|1\|DA, 3JCJ\|1\|0, 4V7U\|1\|DB, 5IQR\|1\|3, 4U24\|1\|DB, 4V6C\|1\|BB, 4WOI\|1\|BB, 4V54\|1\|DA, 4V9D\|1\|DB, 3JBV\|1\|a, 4V4H\|1\|BA, 5JC9\|1\|DB, 4V7T\|1\|BB, 5GAE\|1\|B, 4V5B\|1\|CA, 4V9P\|1\|GB, 4U20\|1\|BB, 4V53\|1\|BA, 4V9C\|1\|BB, 5J91\|1\|CB, 4YBB\|1\|DB, 4V50\|1\|BA, 4U1U\|1\|BB, 4V7V\|1\|BB, 4U25\|1\|BB, 5J88\|1\|CB, 4V6C\|1\|DB, 4WOI\|1\|CB, 4V55\|1\|BA, 3JCD\|1\|B, 4V9O\|1\|AB, 4V4H\|1\|DA, 5JTE\|1\|BB, 4V7T\|1\|DB, 5GAG\|1\|B, 4WF1\|1\|BB, 4U27\|1\|BB, 3J9Z\|1\|LB, 4V6E\|1\|DB, 4V57\|1\|BA, 4V9P\|1\|AB, 4V50\|1\|DA, 4U1U\|1\|DB, 4V7V\|1\|DB, 4U25\|1\|DB, 5J88\|1\|DB, 4V6D\|1\|BB, 4WWW\|1\|RB, 4V9O\|1\|CB, 5JU8\|1\|BB, 4U20\|1\|DB, 4V64\|1\|BA, 4V53\|1\|DA, 4V9C\|1\|DB, 5J91\|1\|DB, 3JA1\|1\|LB, 4U27\|1\|DB, 4V7S\|1\|BB, 5AFI\|1\|B, 4V57\|1\|DA, 4V9P\|1\|CB, 4U1V\|1\|BB, 4V85\|1\|BB, 5J8A\|1\|CB, 4V55\|1\|DA, 4V4Q\|1\|BA, 3JCE\|1\|B, 4V7U\|1\|BB, 5GAH\|1\|B, 4U24\|1\|BB, 4V64\|1\|DA, 4WF1\|1\|DB, 4V54\|1\|BA, 4V9D\|1\|CB, 5JC9\|1\|CB, 3JBU\|1\|a, 4V52\|1\|BA, 4U26\|1\|BB, 3J7Z\|1\|B, 4V6D	(0)	(23) 5LZE\|1\|B, 5MDW\|1\|3, 5MDZ\|1\|3, 5KPX\|1\|28, 5LZD\|1\|B, 5KPS\|1\|29, 5KCR\|1\|1B, 5IT8\|1\|DB, 5J7L\|1\|CB, 5J5B\|1\|DB, 5J7L\|1\|DB, 5H5U\|1\|B, 5U9F\|1\|02, 5U4I\|1\|B, 5U9G\|1\|02, 5LZA\|1\|B, 5MDV\|1\|3, 5MDY\|1\|3, 5KPW\|1\|28, 5KCS\|1\|1B, 5IT8\|1\|CB, 5J5B\|1\|CB, 5MGP\|1\|B

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).

#S	PDB	Title	Method	Resolution	Length
1	4V9O\|1\|GB	Title: Control of ribosomal subunit rotation by elongation factor G	X-RAY DIFFRACTION	2.9	118
2	4V9P\|1\|GB	Title: Control of ribosomal subunit rotation by elongation factor G	X-RAY DIFFRACTION	2.9	118
3	4V9C\|1\|BB	Title: Allosteric control of the ribosome by small-molecule antibiotics	X-RAY DIFFRACTION	3.3	118
4	4WOI\|1\|CB	Title: 4,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2	X-RAY DIFFRACTION	3	118
5	3JCJ\|1\|0	Title: Structures of ribosome-bound initiation factor 2 reveal the mechanism of subunit association	ELECTRON MICROSCOPY	3.7	118
6	3J7Z\|1\|B	Title: Structure of the E. coli 50S subunit with ErmCL nascent chain	ELECTRON MICROSCOPY	3.9	118
7	4UY8\|1\|B	Title: Molecular basis for the ribosome functioning as a L-tryptophan sensor - Cryo-EM structure of a TnaC stalled E.coli ribosome	ELECTRON MICROSCOPY	3.8	118
8	4V9O\|1\|AB	Title: Control of ribosomal subunit rotation by elongation factor G	X-RAY DIFFRACTION	2.9	118
9	4V9O\|1\|CB	Title: Control of ribosomal subunit rotation by elongation factor G	X-RAY DIFFRACTION	2.9	118
10	4V9P\|1\|CB	Title: Control of ribosomal subunit rotation by elongation factor G	X-RAY DIFFRACTION	2.9	118
11	4V9P\|1\|AB	Title: Control of ribosomal subunit rotation by elongation factor G	X-RAY DIFFRACTION	2.9	118
12	4V85\|1\|BB	Title: Crystal Structure of Release Factor RF3 Trapped in the GTP State on a Rotated Conformation of the Ribosome.	X-RAY DIFFRACTION	3.2	118
13	4V89\|1\|BB	Title: Crystal Structure of Release Factor RF3 Trapped in the GTP State on a Rotated Conformation of the Ribosome (without viomycin)	X-RAY DIFFRACTION	3.7	118
14	4V9C\|1\|DB	Title: Allosteric control of the ribosome by small-molecule antibiotics	X-RAY DIFFRACTION	3.3	119
15	4WOI\|1\|BB	Title: 4,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2	X-RAY DIFFRACTION	3	119
16	4V9D\|1\|CB	Title: Structures of the bacterial ribosome in classical and hybrid states of tRNA binding	X-RAY DIFFRACTION	3	119
17	4U20\|1\|BB	Title: Crystal structure of the E. coli ribosome bound to flopristin.	X-RAY DIFFRACTION	2.9	119
18	4U1U\|1\|BB	Title: Crystal structure of the E. coli ribosome bound to quinupristin.	X-RAY DIFFRACTION	2.95	119
19	4U1V\|1\|BB	Title: Crystal structure of the E. coli ribosome bound to linopristin.	X-RAY DIFFRACTION	3	119
20	4U27\|1\|BB	Title: Crystal structure of the E. coli ribosome bound to flopristin and linopristin.	X-RAY DIFFRACTION	2.8	119
21	4U25\|1\|BB	Title: Crystal structure of the E. coli ribosome bound to virginiamycin M1.	X-RAY DIFFRACTION	2.9	119
22	4U24\|1\|BB	Title: Crystal structure of the E. coli ribosome bound to dalfopristin.	X-RAY DIFFRACTION	2.9	119
23	4U26\|1\|BB	Title: Crystal structure of the E. coli ribosome bound to dalfopristin and quinupristin.	X-RAY DIFFRACTION	2.8	119
24	4WF1\|1\|BB	Title: Crystal structure of the E. coli ribosome bound to negamycin.	X-RAY DIFFRACTION	3.09	119
25	4WWW\|1\|RB	Title: Crystal structure of the E. coli ribosome bound to CEM-101	X-RAY DIFFRACTION	3.1	118
26	4V7S\|1\|BB	Title: Crystal structure of the E. coli ribosome bound to telithromycin.	X-RAY DIFFRACTION	3.25	118
27	4V6C\|1\|BB	Title: Crystal structure of the E. coli 70S ribosome in an intermediate state of ratcheting	X-RAY DIFFRACTION	3.19	118
28	4V7T\|1\|BB	Title: Crystal structure of the E. coli ribosome bound to chloramphenicol.	X-RAY DIFFRACTION	3.19	118
29	4V7V\|1\|BB	Title: Crystal structure of the E. coli ribosome bound to clindamycin.	X-RAY DIFFRACTION	3.29	118
30	4V7U\|1\|BB	Title: Crystal structure of the E. coli ribosome bound to erythromycin.	X-RAY DIFFRACTION	3.1	118
31	4V6E\|1\|BB	Title: Crystal structure of the E. coli 70S ribosome in an intermediate state of ratcheting	X-RAY DIFFRACTION	3.71	118
32	4V6D\|1\|BB	Title: Crystal structure of the E. coli 70S ribosome in an intermediate state of ratcheting	X-RAY DIFFRACTION	3.81	118
33	4YBB\|1\|DB	Title: High-resolution structure of the Escherichia coli ribosome	X-RAY DIFFRACTION	2.1	120
34	5J91\|1\|DB	Title: Structure of the Wild-type 70S E coli ribosome bound to Tigecycline	X-RAY DIFFRACTION	2.96	120
35	5J88\|1\|DB	Title: Structure of the E coli 70S ribosome with the U1060A mutation in 16S rRNA	X-RAY DIFFRACTION	3.32	120
36	5J8A\|1\|DB	Title: Structure of the E coli 70S ribosome with the U1052G mutation in 16S rRNA bound to tigecycline	X-RAY DIFFRACTION	3.1	120
37	5JC9\|1\|DB	Title: Structure of the Escherichia coli ribosome with the U1052G mutation in the 16S rRNA	X-RAY DIFFRACTION	3.03	120
38	5GAE\|1\|B	Title: RNC in complex with a translocating SecYEG	ELECTRON MICROSCOPY	3.33	120
39	5GAG\|1\|B	Title: RNC in complex with SRP-SR in the closed state	ELECTRON MICROSCOPY	3.8	120
40	5GAH\|1\|B	Title: RNC in complex with SRP with detached NG domain	ELECTRON MICROSCOPY	3.8	120
41	5GAD\|1\|B	Title: RNC-SRP-SR complex early state	ELECTRON MICROSCOPY	3.7	120
42	3JCD\|1\|B	Title: Structure of Escherichia coli EF4 in posttranslocational ribosomes (Post EF4)	ELECTRON MICROSCOPY	3.7	118
43	3JCE\|1\|B	Title: Structure of Escherichia coli EF4 in pretranslocational ribosomes (Pre EF4)	ELECTRON MICROSCOPY	3.2	118
44	5L3P\|1\|B	Title: Cryo-EM structure of stringent response factor RelA bound to ErmCL-stalled ribosome complex	ELECTRON MICROSCOPY	3.7	120
45	5AFI\|1\|B	Title: 2.9A Structure of E. coli ribosome-EF-TU complex by cs-corrected cryo-EM	ELECTRON MICROSCOPY	2.9	120
46	3J9Y\|1\|B	Title: Cryo-EM structure of tetracycline resistance protein TetM bound to a translating E.coli ribosome	ELECTRON MICROSCOPY	3.9	120
47	5IQR\|1\|3	Title: Structure of RelA bound to the 70S ribosome	ELECTRON MICROSCOPY	3	118
48	5JC9\|1\|CB	Title: Structure of the Escherichia coli ribosome with the U1052G mutation in the 16S rRNA	X-RAY DIFFRACTION	3.03	118
49	5J8A\|1\|CB	Title: Structure of the E coli 70S ribosome with the U1052G mutation in 16S rRNA bound to tigecycline	X-RAY DIFFRACTION	3.1	118
50	5J91\|1\|CB	Title: Structure of the Wild-type 70S E coli ribosome bound to Tigecycline	X-RAY DIFFRACTION	2.96	118
51	5J88\|1\|CB	Title: Structure of the E coli 70S ribosome with the U1060A mutation in 16S rRNA	X-RAY DIFFRACTION	3.32	118
52	5JU8\|1\|BB	Title: Cryo-EM structure of an ErmBL-stalled ribosome in complex with P-, and E-tRNA	ELECTRON MICROSCOPY	3.6	118
53	5JTE\|1\|BB	Title: Cryo-EM structure of an ErmBL-stalled ribosome in complex with A-, P-, and E-tRNA	ELECTRON MICROSCOPY	3.6	118
54	4V9P\|1\|EB	Title: Control of ribosomal subunit rotation by elongation factor G	X-RAY DIFFRACTION	2.9	118
55	4V9O\|1\|EB	Title: Control of ribosomal subunit rotation by elongation factor G	X-RAY DIFFRACTION	2.9	118
56	4YBB\|1\|CB	Title: High-resolution structure of the Escherichia coli ribosome	X-RAY DIFFRACTION	2.1	118
57	4WF1\|1\|DB	Title: Crystal structure of the E. coli ribosome bound to negamycin.	X-RAY DIFFRACTION	3.09	118
58	4V9D\|1\|DB	Title: Structures of the bacterial ribosome in classical and hybrid states of tRNA binding	X-RAY DIFFRACTION	3	118
59	4U1U\|1\|DB	Title: Crystal structure of the E. coli ribosome bound to quinupristin.	X-RAY DIFFRACTION	2.95	118
60	4U20\|1\|DB	Title: Crystal structure of the E. coli ribosome bound to flopristin.	X-RAY DIFFRACTION	2.9	118
61	4U1V\|1\|DB	Title: Crystal structure of the E. coli ribosome bound to linopristin.	X-RAY DIFFRACTION	3	118
62	4U27\|1\|DB	Title: Crystal structure of the E. coli ribosome bound to flopristin and linopristin.	X-RAY DIFFRACTION	2.8	118
63	4U25\|1\|DB	Title: Crystal structure of the E. coli ribosome bound to virginiamycin M1.	X-RAY DIFFRACTION	2.9	118
64	4U26\|1\|DB	Title: Crystal structure of the E. coli ribosome bound to dalfopristin and quinupristin.	X-RAY DIFFRACTION	2.8	118
65	4U24\|1\|DB	Title: Crystal structure of the E. coli ribosome bound to dalfopristin.	X-RAY DIFFRACTION	2.9	118
66	4V6D\|1\|DB	Title: Crystal structure of the E. coli 70S ribosome in an intermediate state of ratcheting	X-RAY DIFFRACTION	3.81	117
67	4V6E\|1\|DB	Title: Crystal structure of the E. coli 70S ribosome in an intermediate state of ratcheting	X-RAY DIFFRACTION	3.71	117
68	4WWW\|1\|YB	Title: Crystal structure of the E. coli ribosome bound to CEM-101	X-RAY DIFFRACTION	3.1	117
69	4V7T\|1\|DB	Title: Crystal structure of the E. coli ribosome bound to chloramphenicol.	X-RAY DIFFRACTION	3.19	117
70	4V7V\|1\|DB	Title: Crystal structure of the E. coli ribosome bound to clindamycin.	X-RAY DIFFRACTION	3.29	117
71	4V7S\|1\|DB	Title: Crystal structure of the E. coli ribosome bound to telithromycin.	X-RAY DIFFRACTION	3.25	117
72	4V6C\|1\|DB	Title: Crystal structure of the E. coli 70S ribosome in an intermediate state of ratcheting	X-RAY DIFFRACTION	3.19	117
73	4V7U\|1\|DB	Title: Crystal structure of the E. coli ribosome bound to erythromycin.	X-RAY DIFFRACTION	3.1	117
74	3J9Z\|1\|LB	Title: Activation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor G	ELECTRON MICROSCOPY	3.6	120
75	3JA1\|1\|LB	Title: Activation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor G	ELECTRON MICROSCOPY	3.6	120
76	4V56\|1\|DA	Title: Crystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin.	X-RAY DIFFRACTION	3.93	117
77	4V56\|1\|BA	Title: Crystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin.	X-RAY DIFFRACTION	3.93	117
78	4V64\|1\|BA	Title: Crystal structure of the bacterial ribosome from Escherichia coli in complex with hygromycin B.	X-RAY DIFFRACTION	3.5	117
79	4V55\|1\|BA	Title: Crystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin and ribosome recycling factor (RRF).	X-RAY DIFFRACTION	4	117
80	4V53\|1\|BA	Title: Crystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin.	X-RAY DIFFRACTION	3.54	117
81	4V52\|1\|BA	Title: Crystal structure of the bacterial ribosome from Escherichia coli in complex with neomycin.	X-RAY DIFFRACTION	3.21	117
82	4V57\|1\|BA	Title: Crystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin and neomycin.	X-RAY DIFFRACTION	3.5	117
83	4V57\|1\|DA	Title: Crystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin and neomycin.	X-RAY DIFFRACTION	3.5	117
84	4V52\|1\|DA	Title: Crystal structure of the bacterial ribosome from Escherichia coli in complex with neomycin.	X-RAY DIFFRACTION	3.21	117
85	4V64\|1\|DA	Title: Crystal structure of the bacterial ribosome from Escherichia coli in complex with hygromycin B.	X-RAY DIFFRACTION	3.5	117
86	4V53\|1\|DA	Title: Crystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin.	X-RAY DIFFRACTION	3.54	117
87	4V55\|1\|DA	Title: Crystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin and ribosome recycling factor (RRF).	X-RAY DIFFRACTION	4	117
88	4V54\|1\|DA	Title: Crystal structure of the bacterial ribosome from Escherichia coli in complex with ribosome recycling factor (RRF).	X-RAY DIFFRACTION	3.3	117
89	4V54\|1\|BA	Title: Crystal structure of the bacterial ribosome from Escherichia coli in complex with ribosome recycling factor (RRF).	X-RAY DIFFRACTION	3.3	117
90	4V50\|1\|BA	Title: Crystal Structure of Ribosome with messenger RNA and the Anticodon stem-loop of P-site tRNA.	X-RAY DIFFRACTION	3.22	117
91	4V50\|1\|DA	Title: Crystal Structure of Ribosome with messenger RNA and the Anticodon stem-loop of P-site tRNA.	X-RAY DIFFRACTION	3.22	117
92	4V4H\|1\|BA	Title: Crystal structure of the bacterial ribosome from Escherichia coli in complex with the antibiotic kasugamyin at 3.5A resolution.	X-RAY DIFFRACTION	3.46	117
93	4V4Q\|1\|BA	Title: Crystal structure of the bacterial ribosome from Escherichia coli at 3.5 A resolution.	X-RAY DIFFRACTION	3.46	117
94	4V5B\|1\|AA	Title: Structure of PDF binding helix in complex with the ribosome	X-RAY DIFFRACTION	3.74	117
95	4V5B\|1\|CA	Title: Structure of PDF binding helix in complex with the ribosome	X-RAY DIFFRACTION	3.74	117
96	4V4H\|1\|DA	Title: Crystal structure of the bacterial ribosome from Escherichia coli in complex with the antibiotic kasugamyin at 3.5A resolution.	X-RAY DIFFRACTION	3.46	117
97	4V4Q\|1\|DA	Title: Crystal structure of the bacterial ribosome from Escherichia coli at 3.5 A resolution.	X-RAY DIFFRACTION	3.46	117
98	3JBV\|1\|a	Title: Mechanisms of Ribosome Stalling by SecM at Multiple Elongation Steps	ELECTRON MICROSCOPY	3.32	117
99	3JBU\|1\|a	Title: Mechanisms of Ribosome Stalling by SecM at Multiple Elongation Steps	ELECTRON MICROSCOPY	3.64	118

Coloring options: Nucleotide numbers

Equivalence class NR_4.0_91789.1 Obsolete

Release history

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