Equivalence class NR_4.0_88310.1 Current
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 3LQX|1|B (rep) | SRP RNA | SRP ribonucleoprotein core complexed with cobalt hexammine | X-ray diffraction | 1.93 | 2010-03-02 | ||||
| 2 | 1HQ1|1|B | 4.5S RNA DOMAIN IV | STRUCTURAL AND ENERGETIC ANALYSIS OF RNA RECOGNITION BY A UNIVERSALLY CONSERVED PROTEIN FROM THE SIGNAL RECOGNITION PARTICLE | X-ray diffraction | 1.52 | 2001-01-03 | ||||
| 3 | 2PXE|1|B | 4.5 S RNA | Variant 4 of Ribonucleoprotein Core of the E. Coli Signal Recognition Particle | X-ray diffraction | 2 | 2007-08-07 | ||||
| 4 | 2PXD|1|B | 4.5 S RNA | Variant 1 of Ribonucleoprotein Core of the E. Coli Signal Recognition Particle | X-ray diffraction | 2 | 2007-08-07 | ||||
| 5 | 2PXT|1|B | 4.5 S RNA | Variant 15 of Ribonucleoprotein Core of the E. Coli Signal Recognition Particle | X-ray diffraction | 2.5 | 2007-08-07 | ||||
| 6 | 2PXB|1|B | 4.5 S RNA | Variant 2 of Ribonucleoprotein Core of the E. Coli Signal Recognition Particle | X-ray diffraction | 2.5 | 2007-08-07 | ||||
| 7 | 2PXF|1|B | 4.5 S RNA | Variant 5 of Ribonucleoprotein Core of the E. Coli Signal Recognition Particle | X-ray diffraction | 2 | 2007-08-07 | ||||
| 8 | 2PXP|1|B | 4.5 S RNA | Variant 13 of Ribonucleoprotein Core of the E. Coli Signal Recognition Particle | X-ray diffraction | 2.5 | 2007-08-07 | ||||
| 9 | 2PXL|1|B | 4.5 S RNA | Variant 9 of Ribonucleoprotein Core of the E. Coli Signal Recognition Particle | X-ray diffraction | 2.5 | 2007-08-07 | ||||
| 10 | 2PXV|1|B | 4.5 S RNA | Escherichia coli | Bacteria | Variant 6 of Ribonucleoprotein Core of the E. Coli Signal Recognition Particle | X-ray diffraction | 2 | 2007-08-07 | ||
| 11 | 2PXU|1|B | 4.5 S RNA | Variant 16 of Ribonucleoprotein Core of the E. Coli Signal Recognition Particle | X-ray diffraction | 2.5 | 2007-08-07 | ||||
| 12 | 2PXK|1|B | 4.5 S RNA | Variant 8 of Ribonucleoprotein Core of the E. Coli Signal Recognition Particle | X-ray diffraction | 2.5 | 2007-08-07 | ||||
| 13 | 2PXQ|1|B | 4.5 S RNA | Variant 14 of Ribonucleoprotein Core of the E. Coli Signal Recognition Particle | X-ray diffraction | 2.5 | 2007-08-07 | ||||
| 14 | 1DUL|1|B | 4.5 S RNA DOMAIN IV | STRUCTURE OF THE RIBONUCLEOPROTEIN CORE OF THE E. COLI SIGNAL RECOGNITION PARTICLE | X-ray diffraction | 1.8 | 2000-02-28 |
Release history
| Release | 8.0 | 7.0 | 9.0 | 9.1 | 9.2 | 9.3 | 9.4 | 9.5 | 9.6 | 9.7 | 9.8 | 9.9 | 9.10 | 9.11 | 9.12 | 9.13 | 9.14 | 9.15 | 9.16 | 9.17 | 9.18 | 9.19 | 9.20 | 9.21 | 9.22 | 9.23 | 9.24 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2017-04-05 | 2017-04-05 | 2017-10-26 | 2017-11-07 | 2017-12-02 | 2017-12-13 | 2017-12-21 | 2017-12-22 | 2018-01-04 | 2018-01-05 | 2018-01-10 | 2018-01-11 | 2018-01-12 | 2018-01-28 | 2018-04-01 | 2018-04-01 | 2018-09-14 | 2018-11-09 | 2018-11-16 | 2018-11-23 | 2018-11-30 | 2018-12-05 | 2018-12-12 | 2018-12-19 | 2018-12-26 | 2019-01-02 | 2019-01-09 |
Parents
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
|---|
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length | NAKB_NA_annotation | NAKB_protein_annotation |
|---|---|---|---|---|---|---|---|
| 1 | 2PXE|1|B | Title: Variant 4 of Ribonucleoprotein Core of the E. Coli Signal Recognition Particle | X-RAY DIFFRACTION | 2 | 49 | ||
| 2 | 2PXK|1|B | Title: Variant 8 of Ribonucleoprotein Core of the E. Coli Signal Recognition Particle | X-RAY DIFFRACTION | 2.5 | 49 | ||
| 3 | 2PXF|1|B | Title: Variant 5 of Ribonucleoprotein Core of the E. Coli Signal Recognition Particle | X-RAY DIFFRACTION | 2 | 49 | ||
| 4 | 2PXP|1|B | Title: Variant 13 of Ribonucleoprotein Core of the E. Coli Signal Recognition Particle | X-RAY DIFFRACTION | 2.5 | 49 | ||
| 5 | 2PXD|1|B | Title: Variant 1 of Ribonucleoprotein Core of the E. Coli Signal Recognition Particle | X-RAY DIFFRACTION | 2 | 49 | ||
| 6 | 2PXQ|1|B | Title: Variant 14 of Ribonucleoprotein Core of the E. Coli Signal Recognition Particle | X-RAY DIFFRACTION | 2.5 | 49 | ||
| 7 | 3LQX|1|B | Title: SRP ribonucleoprotein core complexed with cobalt hexammine | X-RAY DIFFRACTION | 1.93 | 48 | ||
| 8 | 1DUL|1|B | Title: STRUCTURE OF THE RIBONUCLEOPROTEIN CORE OF THE E. COLI SIGNAL RECOGNITION PARTICLE | X-RAY DIFFRACTION | 1.8 | 48 | ||
| 9 | 1HQ1|1|B | Title: STRUCTURAL AND ENERGETIC ANALYSIS OF RNA RECOGNITION BY A UNIVERSALLY CONSERVED PROTEIN FROM THE SIGNAL RECOGNITION PARTICLE | X-RAY DIFFRACTION | 1.52 | 48 | ||
| 10 | 2PXU|1|B | Title: Variant 16 of Ribonucleoprotein Core of the E. Coli Signal Recognition Particle | X-RAY DIFFRACTION | 2.5 | 49 | ||
| 11 | 2PXT|1|B | Title: Variant 15 of Ribonucleoprotein Core of the E. Coli Signal Recognition Particle | X-RAY DIFFRACTION | 2.5 | 49 | ||
| 12 | 2PXB|1|B | Title: Variant 2 of Ribonucleoprotein Core of the E. Coli Signal Recognition Particle | X-RAY DIFFRACTION | 2.5 | 49 | ||
| 13 | 2PXV|1|B | Title: Variant 6 of Ribonucleoprotein Core of the E. Coli Signal Recognition Particle | X-RAY DIFFRACTION | 2 | 49 | ||
| 14 | 2PXL|1|B | Title: Variant 9 of Ribonucleoprotein Core of the E. Coli Signal Recognition Particle | X-RAY DIFFRACTION | 2.5 | 47 |
Coloring options: