Equivalence class NR_4.0_85242.1 Current
# | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
---|---|---|---|---|---|---|---|---|---|---|
1 | 4WZJ|1|YYYY (rep) | U4 small nuclear RNA variant: Native sequence 85-145, of which nucleotides 97-104 are replaced with GAAA tetraloop and nucleotides 134-137 are replaced with GAAA tetraloop receptor. | Homo sapiens | Eukarya | Spliceosomal U4 snRNP core domain | X-ray diffraction | 3.6 | 2015-01-14 | ||
2 | 4WZJ|1|XXXX | U4 small nuclear RNA variant: Native sequence 85-145, of which nucleotides 97-104 are replaced with GAAA tetraloop and nucleotides 134-137 are replaced with GAAA tetraloop receptor. | Homo sapiens | Eukarya | Spliceosomal U4 snRNP core domain | X-ray diffraction | 3.6 | 2015-01-14 | ||
3 | 4WZJ|1|VVVV | U4 small nuclear RNA variant: Native sequence 85-145, of which nucleotides 97-104 are replaced with GAAA tetraloop and nucleotides 134-137 are replaced with GAAA tetraloop receptor. | Homo sapiens | Eukarya | Spliceosomal U4 snRNP core domain | X-ray diffraction | 3.6 | 2015-01-14 |
Release history
Parents
This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
---|---|---|---|---|---|
NR_4.0_85242.1 | NR_4.0_71450.1 | 9.16 | (3) 4WZJ|1|YYYY, 4WZJ|1|VVVV, 4WZJ|1|XXXX | (0) | (12) 4V5U|1|CY, 4V5U|1|AV, 4V5U|1|BV, 4V5U|1|DX, 4V5U|1|BY, 4V5U|1|CX, 4V5U|1|AY, 4V5U|1|DV, 4V5U|1|BX, 4V5U|1|DY, 4V5U|1|CV, 4V5U|1|AX |
Children
This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
---|
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).#S | PDB | Title | Method | Resolution | Length | NAKB_NA_annotation | NAKB_protein_annotation |
---|---|---|---|---|---|---|---|
1 | 4WZJ|1|XXXX | Title: Spliceosomal U4 snRNP core domain | X-RAY DIFFRACTION | 3.6 | 68 | ||
2 | 4WZJ|1|YYYY | Title: Spliceosomal U4 snRNP core domain | X-RAY DIFFRACTION | 3.6 | 68 | ||
3 | 4WZJ|1|VVVV | Title: Spliceosomal U4 snRNP core domain | X-RAY DIFFRACTION | 3.6 | 68 |
Coloring options: