Equivalence class NR_4.0_83076.1 Current
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 5F8N|1|B+ 5F8N|1|C (rep) | RNA (35-MER), RNA (5'-R(*UP*GP*UP*UP*CP*GP*AP*CP*GP*AP*GP*AP*GP*AP*GP*AP*CP*CP*U)-3') | synthetic construct | Synthetic | Enterovirus 71 Polymerase Elongation Complex (C3S6 Form) | X-ray diffraction | 2.48 | 2016-06-22 | ||
| 2 | 4K4W|1|B+ 4K4W|1|C | RNA (5'-R(P*GP*GP*GP*AP*GP*AP*UP*GP*AP*AP*AP*GP*UP*CP*UP*CP*CP*AP*GP*GP*UP*CP*UP*CP*UP*CP*UP*CP*GP*UP*CP*GP*AP*AP*A)-3'), RNA (5'-R(*UP*GP*UP*UP*CP*GP*AP*CP*GP*AP*GP*AP*GP*AP*GP*AP*CP*C)-3') | Poliovirus polymerase elongation complex (r5+2_form) | X-ray diffraction | 2.69 | 2013-05-22 | ||||
| 3 | 4K4W|1|F+ 4K4W|1|G | RNA (5'-R(P*GP*GP*GP*AP*GP*AP*UP*GP*AP*AP*AP*GP*UP*CP*UP*CP*CP*AP*GP*GP*UP*CP*UP*CP*UP*CP*UP*CP*GP*UP*CP*GP*AP*AP*A)-3'), RNA (5'-R(*UP*GP*UP*UP*CP*GP*AP*CP*GP*AP*GP*AP*GP*AP*GP*AP*CP*C)-3') | Poliovirus polymerase elongation complex (r5+2_form) | X-ray diffraction | 2.69 | 2013-05-22 | ||||
| 4 | 5F8M|1|B+ 5F8M|1|C | RNA (35-MER), RNA (5'-R(*UP*GP*UP*UP*CP*GP*AP*CP*GP*AP*GP*AP*GP*AP*GP*AP*CP*CP*U)-3') | synthetic construct | Synthetic | Enterovirus 71 Polymerase Elongation Complex (C3S4/5 Form) | X-ray diffraction | 2.83 | 2016-06-22 | ||
| 5 | 5F8L|1|B+ 5F8L|1|C | RNA (35-MER), RNA (5'-R(*UP*GP*UP*UP*CP*GP*AP*CP*GP*AP*GP*AP*GP*AP*GP*AP*CP*C)-3') | synthetic construct | Synthetic | Enterovirus 71 Polymerase Elongation Complex (C3S1 Form) | X-ray diffraction | 2.81 | 2016-06-22 |
Release history
| Release | 8.0 | 7.0 | 9.0 | 9.1 | 9.2 | 9.3 | 9.4 | 9.5 | 9.6 | 9.7 | 9.8 | 9.9 | 9.10 | 9.11 | 9.12 | 9.13 | 9.14 | 9.15 | 9.16 | 9.17 | 9.18 | 9.19 | 9.20 | 9.21 | 9.22 | 9.23 | 9.24 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2017-04-05 | 2017-04-05 | 2017-10-26 | 2017-11-07 | 2017-12-02 | 2017-12-13 | 2017-12-21 | 2017-12-22 | 2018-01-04 | 2018-01-05 | 2018-01-10 | 2018-01-11 | 2018-01-12 | 2018-01-28 | 2018-04-01 | 2018-04-01 | 2018-09-14 | 2018-11-09 | 2018-11-16 | 2018-11-23 | 2018-11-30 | 2018-12-05 | 2018-12-12 | 2018-12-19 | 2018-12-26 | 2019-01-02 | 2019-01-09 |
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
|---|---|---|---|---|---|
| NR_4.0_83076.1 | NR_4.0_83076.1 | 8.0 | (5) 4K4W|1|B+4K4W|1|C, 4K4W|1|F+4K4W|1|G, 5F8L|1|B+5F8L|1|C, 5F8M|1|B+5F8M|1|C, 5F8N|1|B+5F8N|1|C | (0) | (0) |
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
|---|
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length | NAKB_NA_annotation | NAKB_protein_annotation |
|---|---|---|---|---|---|---|---|
| 1 | 4K4W|1|F+4K4W|1|G | Title: Poliovirus polymerase elongation complex (r5+2_form) | X-RAY DIFFRACTION | 2.69 | 21 | ||
| 2 | 4K4W|1|B+4K4W|1|C | Title: Poliovirus polymerase elongation complex (r5+2_form) | X-RAY DIFFRACTION | 2.69 | 21 | ||
| 3 | 5F8L|1|B+5F8L|1|C | Title: Enterovirus 71 Polymerase Elongation Complex (C3S1 Form) | X-RAY DIFFRACTION | 2.81 | 12 | ||
| 4 | 5F8M|1|B+5F8M|1|C | Title: Enterovirus 71 Polymerase Elongation Complex (C3S4/5 Form) | X-RAY DIFFRACTION | 2.83 | 12 | ||
| 5 | 5F8N|1|B+5F8N|1|C | Title: Enterovirus 71 Polymerase Elongation Complex (C3S6 Form) | X-RAY DIFFRACTION | 2.48 | 9 |
Coloring options: