#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. ÅDate
15HNJ|1|A+ 5HNJ|1|B (rep)RNA (5'-R(*GP*UP*AP*(OFC)P*GP*UP*AP*C)-3')synthetic constructSyntheticBase Pairing and Structure Insights into the 5-Formylcytosine in RNA DuplexX-ray diffraction1.242016-04-27
25HNJ|1|C+ 5HNJ|1|DRNA (5'-R(*GP*UP*AP*(OFC)P*GP*UP*AP*C)-3')synthetic constructSyntheticBase Pairing and Structure Insights into the 5-Formylcytosine in RNA DuplexX-ray diffraction1.242016-04-27
35HN2|1|B+ 5HN2|1|ARNA (5'-R(*GP*UP*AP*(OFC)P*GP*UP*AP*C)-3')synthetic constructSyntheticBase Pairing and Structure Insights into the 5-Formylcytosine in RNA DuplexX-ray diffraction1.52016-04-27
45HNJ|1|E+ 5HNJ|1|FRNA (5'-R(*GP*UP*AP*(OFC)P*GP*UP*AP*C)-3')synthetic constructSyntheticBase Pairing and Structure Insights into the 5-Formylcytosine in RNA DuplexX-ray diffraction1.242016-04-27
55HN2|1|C+ 5HN2|1|DRNA (5'-R(*GP*UP*AP*(OFC)P*GP*UP*AP*C)-3')synthetic constructSyntheticBase Pairing and Structure Insights into the 5-Formylcytosine in RNA DuplexX-ray diffraction1.52016-04-27
65HN2|1|E+ 5HN2|1|FRNA (5'-R(*GP*UP*AP*(OFC)P*GP*UP*AP*C)-3')synthetic constructSyntheticBase Pairing and Structure Insights into the 5-Formylcytosine in RNA DuplexX-ray diffraction1.52016-04-27
75HNQ|1|A+ 5HNQ|1|B5fC modified RNAsynthetic constructSyntheticBase Pairing and Structure Insights into the 5-Formylcytosine in RNA DuplexX-ray diffraction2.42016-04-27
85HNQ|1|C+ 5HNQ|1|D5fC modified RNAsynthetic constructSyntheticBase Pairing and Structure Insights into the 5-Formylcytosine in RNA DuplexX-ray diffraction2.42016-04-27
95HNQ|1|K+ 5HNQ|1|L5fC modified RNAsynthetic constructSyntheticBase Pairing and Structure Insights into the 5-Formylcytosine in RNA DuplexX-ray diffraction2.42016-04-27
105HNQ|1|E+ 5HNQ|1|F5fC modified RNAsynthetic constructSyntheticBase Pairing and Structure Insights into the 5-Formylcytosine in RNA DuplexX-ray diffraction2.42016-04-27
115HNQ|1|I+ 5HNQ|1|J5fC modified RNAsynthetic constructSyntheticBase Pairing and Structure Insights into the 5-Formylcytosine in RNA DuplexX-ray diffraction2.42016-04-27
125HNQ|1|M5fC modified RNAsynthetic constructSyntheticBase Pairing and Structure Insights into the 5-Formylcytosine in RNA DuplexX-ray diffraction2.42016-04-27
135HNQ|1|G+ 5HNQ|1|H5fC modified RNAsynthetic constructSyntheticBase Pairing and Structure Insights into the 5-Formylcytosine in RNA DuplexX-ray diffraction2.42016-04-27

Release history

Release8.07.09.09.19.29.39.49.59.69.79.89.99.109.119.129.139.149.159.169.179.189.199.209.219.229.239.24
Date2017-04-052017-04-052017-10-262017-11-072017-12-022017-12-132017-12-212017-12-222018-01-042018-01-052018-01-102018-01-112018-01-122018-01-282018-04-012018-04-012018-09-142018-11-092018-11-162018-11-232018-11-302018-12-052018-12-122018-12-192018-12-262019-01-022019-01-09

Children

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Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLengthNAKB_NA_annotationNAKB_protein_annotation
15HNJ|1|C+5HNJ|1|DTitle: Base Pairing and Structure Insights into the 5-Formylcytosine in RNA DuplexX-RAY DIFFRACTION1.247
25HNQ|1|E+5HNQ|1|FTitle: Base Pairing and Structure Insights into the 5-Formylcytosine in RNA DuplexX-RAY DIFFRACTION2.47
35HNQ|1|A+5HNQ|1|BTitle: Base Pairing and Structure Insights into the 5-Formylcytosine in RNA DuplexX-RAY DIFFRACTION2.47
45HN2|1|C+5HN2|1|DTitle: Base Pairing and Structure Insights into the 5-Formylcytosine in RNA DuplexX-RAY DIFFRACTION1.57
55HNJ|1|E+5HNJ|1|FTitle: Base Pairing and Structure Insights into the 5-Formylcytosine in RNA DuplexX-RAY DIFFRACTION1.247
65HNQ|1|I+5HNQ|1|JTitle: Base Pairing and Structure Insights into the 5-Formylcytosine in RNA DuplexX-RAY DIFFRACTION2.47
75HN2|1|E+5HN2|1|FTitle: Base Pairing and Structure Insights into the 5-Formylcytosine in RNA DuplexX-RAY DIFFRACTION1.57
85HNJ|1|A+5HNJ|1|BTitle: Base Pairing and Structure Insights into the 5-Formylcytosine in RNA DuplexX-RAY DIFFRACTION1.247
95HNQ|1|MTitle: Base Pairing and Structure Insights into the 5-Formylcytosine in RNA DuplexX-RAY DIFFRACTION2.47
105HNQ|1|G+5HNQ|1|HTitle: Base Pairing and Structure Insights into the 5-Formylcytosine in RNA DuplexX-RAY DIFFRACTION2.47
115HNQ|1|K+5HNQ|1|LTitle: Base Pairing and Structure Insights into the 5-Formylcytosine in RNA DuplexX-RAY DIFFRACTION2.47
125HNQ|1|C+5HNQ|1|DTitle: Base Pairing and Structure Insights into the 5-Formylcytosine in RNA DuplexX-RAY DIFFRACTION2.47
135HN2|1|B+5HN2|1|ATitle: Base Pairing and Structure Insights into the 5-Formylcytosine in RNA DuplexX-RAY DIFFRACTION1.59

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