Equivalence class NR_4.0_80338.1 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 4X4O|1|D (rep) | G70A tRNA minihelix | Homo sapiens | Eukarya | Crystal structure of the A.fulgidus CCA-adding enzyme in complex with a G70A arginyl-tRNA minihelix and CTP | X-ray diffraction | 3.2 | 2015-02-11 | ||
| 2 | 4X4T|1|D | G70A tRNA minihelix ending in CCACCA, RNA (5'-D(P*CP*G)-3') | Homo sapiens | Eukarya | Crystal structure of the A.fulgidus CCA-adding enzyme in complex with a G70A arginyl-tRNA minihelix ending in CCACCA | X-ray diffraction | 2.5 | 2015-02-11 | ||
| 3 | 4X4O|1|B | G70A tRNA minihelix | Homo sapiens | Eukarya | Crystal structure of the A.fulgidus CCA-adding enzyme in complex with a G70A arginyl-tRNA minihelix and CTP | X-ray diffraction | 3.2 | 2015-02-11 | ||
| 4 | 4X4Q|1|B | G70A tRNA minihelix ending in CCAC | Homo sapiens | Eukarya | Crystal structure of the A.fulgidus CCA-adding enzyme in complex with a G70A arginyl-tRNA minihelix ending in CCAC and CTP | X-ray diffraction | 3.15 | 2015-02-11 | ||
| 5 | 4X4T|1|B | G70A tRNA minihelix ending in CCACCA, RNA (5'-D(P*GP*G)-3') | Homo sapiens | Eukarya | Crystal structure of the A.fulgidus CCA-adding enzyme in complex with a G70A arginyl-tRNA minihelix ending in CCACCA | X-ray diffraction | 2.5 | 2015-02-11 | ||
| 6 | 4X4N|1|D | G70A tRNA minihelix, RNA (5'-D(P*CP*G)-3') | Homo sapiens | Eukarya | Crystal structure of the A.fulgidus CCA-adding enzyme in complex with a G70A arginyl-tRNA minihelix | X-ray diffraction | 2.95 | 2015-02-11 | ||
| 7 | 4X4N|1|B | G70A tRNA minihelix | Homo sapiens | Eukarya | Crystal structure of the A.fulgidus CCA-adding enzyme in complex with a G70A arginyl-tRNA minihelix | X-ray diffraction | 2.95 | 2015-02-11 | ||
| 8 | 4X4Q|1|D | G70A tRNA minihelix ending in CCAC | Homo sapiens | Eukarya | Crystal structure of the A.fulgidus CCA-adding enzyme in complex with a G70A arginyl-tRNA minihelix ending in CCAC and CTP | X-ray diffraction | 3.15 | 2015-02-11 | ||
| 9 | 4X4T|1|G | G70A tRNA minihelix ending in CCACCA | Homo sapiens | Eukarya | Crystal structure of the A.fulgidus CCA-adding enzyme in complex with a G70A arginyl-tRNA minihelix ending in CCACCA | X-ray diffraction | 2.5 | 2015-02-11 | ||
| 10 | 4X4N|1|G | G70A tRNA minihelix | Homo sapiens | Eukarya | Crystal structure of the A.fulgidus CCA-adding enzyme in complex with a G70A arginyl-tRNA minihelix | X-ray diffraction | 2.95 | 2015-02-11 |
Release history
| Release | 6.0 |
|---|---|
| Date | 2017-04-04 |
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
|---|---|---|---|---|---|
| NR_4.0_80338.1 | NR_4.0_26208.1 | 6.0 | (3) 4X4N|1|G, 4X4N|1|B, 4X4N|1|D | (7) 4X4Q|1|B, 4X4T|1|B, 4X4T|1|G, 4X4O|1|D, 4X4Q|1|D, 4X4T|1|D, 4X4O|1|B | (0) |
| NR_4.0_80338.1 | NR_4.0_30111.1 | 6.0 | (1) 4X4T|1|G | (9) 4X4O|1|D, 4X4T|1|D, 4X4O|1|B, 4X4T|1|B, 4X4N|1|G, 4X4Q|1|D, 4X4N|1|D, 4X4Q|1|B, 4X4N|1|B | (0) |
| NR_4.0_80338.1 | NR_4.0_50085.1 | 6.0 | (2) 4X4Q|1|D, 4X4Q|1|B | (8) 4X4N|1|G, 4X4T|1|D, 4X4T|1|G, 4X4O|1|B, 4X4T|1|B, 4X4N|1|B, 4X4O|1|D, 4X4N|1|D | (8) 4X4P|1|F, 4X4P|1|H, 4X4P|1|D, 4X4R|1|B, 4X4R|1|D, 4X4S|1|B, 4X4S|1|D, 4X4P|1|B |
| NR_4.0_80338.1 | NR_4.0_63278.1 | 6.0 | (4) 4X4O|1|B, 4X4O|1|D, 4X4T|1|D, 4X4T|1|B | (6) 4X4N|1|B, 4X4Q|1|B, 4X4Q|1|D, 4X4N|1|D, 4X4N|1|G, 4X4T|1|G | (0) |
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
|---|---|---|---|---|---|
| NR_4.0_80338.1 | NR_4.0_84227.1 | 7.0 | (10) 4X4O|1|B, 4X4Q|1|B, 4X4T|1|B, 4X4T|1|G, 4X4N|1|D, 4X4N|1|G, 4X4O|1|D, 4X4Q|1|D, 4X4T|1|D, 4X4N|1|B | (0) | (8) 4X4R|1|B, 4X4P|1|H, 4X4P|1|F, 4X4P|1|D, 4X4P|1|B, 4X4S|1|D, 4X4S|1|B, 4X4R|1|D |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length | NAKB_NA_annotation | NAKB_protein_annotation |
|---|---|---|---|---|---|---|---|
| 1 | 4X4T|1|D | Title: Crystal structure of the A.fulgidus CCA-adding enzyme in complex with a G70A arginyl-tRNA minihelix ending in CCACCA | X-RAY DIFFRACTION | 2.5 | 28 | ||
| 2 | 4X4N|1|D | Title: Crystal structure of the A.fulgidus CCA-adding enzyme in complex with a G70A arginyl-tRNA minihelix | X-RAY DIFFRACTION | 2.95 | 31 | ||
| 3 | 4X4N|1|G | Title: Crystal structure of the A.fulgidus CCA-adding enzyme in complex with a G70A arginyl-tRNA minihelix | X-RAY DIFFRACTION | 2.95 | 36 | ||
| 4 | 4X4T|1|G | Title: Crystal structure of the A.fulgidus CCA-adding enzyme in complex with a G70A arginyl-tRNA minihelix ending in CCACCA | X-RAY DIFFRACTION | 2.5 | 35 | ||
| 5 | 4X4N|1|B | Title: Crystal structure of the A.fulgidus CCA-adding enzyme in complex with a G70A arginyl-tRNA minihelix | X-RAY DIFFRACTION | 2.95 | 32 | ||
| 6 | 4X4T|1|B | Title: Crystal structure of the A.fulgidus CCA-adding enzyme in complex with a G70A arginyl-tRNA minihelix ending in CCACCA | X-RAY DIFFRACTION | 2.5 | 31 | ||
| 7 | 4X4O|1|D | Title: Crystal structure of the A.fulgidus CCA-adding enzyme in complex with a G70A arginyl-tRNA minihelix and CTP | X-RAY DIFFRACTION | 3.2 | 34 | ||
| 8 | 4X4O|1|B | Title: Crystal structure of the A.fulgidus CCA-adding enzyme in complex with a G70A arginyl-tRNA minihelix and CTP | X-RAY DIFFRACTION | 3.2 | 34 | ||
| 9 | 4X4Q|1|D | Title: Crystal structure of the A.fulgidus CCA-adding enzyme in complex with a G70A arginyl-tRNA minihelix ending in CCAC and CTP | X-RAY DIFFRACTION | 3.15 | 30 | ||
| 10 | 4X4Q|1|B | Title: Crystal structure of the A.fulgidus CCA-adding enzyme in complex with a G70A arginyl-tRNA minihelix ending in CCAC and CTP | X-RAY DIFFRACTION | 3.15 | 36 |
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