Equivalence class NR_4.0_77608.1 Current
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 1ZL3|1|B (rep) | 5'-R(*GP*GP*CP*AP*AP*CP*GP*GP*UP*(FLO) UP*CP*GP*AP*UP*CP*CP*CP*GP*UP*UP*GP*C)-3' | Coupling of active site motions and RNA binding | X-ray diffraction | 2.8 | 2005-08-09 | ||||
| 2 | 2AB4|1|B | 5'-R(*CP*CP*AP*CP*GP*GP*UP*(FHU)P*CP*GP*AP*AP*UP*CP*CP*GP*UP*GP*GP*C)-3' | Dissecting the Roles of a Strictly Conserved Tyrosine in Substrate Recognition and Catalysis by Pseudouridine 55 Synthase | X-ray diffraction | 2.4 | 2005-12-13 | ||||
| 3 | 1ZE2|1|C | 5'-R(*GP*GP*CP*CP*AP*CP*GP*GP*UP*(FHU)P*CP*GP*AP*AP*UP*CP*CP*GP*UP*GP*GP*C)-3' | Conformational change of pseudouridine 55 synthase upon its association with RNA substrate | X-ray diffraction | 3 | 2005-04-26 | ||||
| 4 | 1ZE2|1|D | 5'-R(*GP*GP*CP*CP*AP*CP*GP*GP*UP*(FHU)P*CP*GP*AP*AP*UP*CP*CP*GP*UP*GP*GP*C)-3' | Conformational change of pseudouridine 55 synthase upon its association with RNA substrate | X-ray diffraction | 3 | 2005-04-26 | ||||
| 5 | 1K8W|1|B | 5'-R(*GP*GP*CP*AP*AP*CP*GP*GP*UP*(FHU)P*CP*GP*AP*UP*CP*CP*CP*GP*UP*UP*GP*C)-3' | Crystal structure of the E. coli pseudouridine synthase TruB bound to a T stem-loop RNA | X-ray diffraction | 1.85 | 2001-12-31 |
Release history
| Release | 8.0 | 7.0 | 9.0 | 9.1 | 9.2 | 9.3 | 9.4 | 9.5 | 9.6 | 9.7 | 9.8 | 9.9 | 9.10 | 9.11 | 9.12 | 9.13 | 9.14 | 9.15 | 9.16 | 9.17 | 9.18 | 9.19 | 9.20 | 9.21 | 9.22 | 9.23 | 9.24 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2017-04-05 | 2017-04-05 | 2017-10-26 | 2017-11-07 | 2017-12-02 | 2017-12-13 | 2017-12-21 | 2017-12-22 | 2018-01-04 | 2018-01-05 | 2018-01-10 | 2018-01-11 | 2018-01-12 | 2018-01-28 | 2018-04-01 | 2018-04-01 | 2018-09-14 | 2018-11-09 | 2018-11-16 | 2018-11-23 | 2018-11-30 | 2018-12-05 | 2018-12-12 | 2018-12-19 | 2018-12-26 | 2019-01-02 | 2019-01-09 |
Parents
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
|---|
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length | NAKB_NA_annotation | NAKB_protein_annotation |
|---|---|---|---|---|---|---|---|
| 1 | 1K8W|1|B | Title: Crystal structure of the E. coli pseudouridine synthase TruB bound to a T stem-loop RNA | X-RAY DIFFRACTION | 1.85 | 21 | ||
| 2 | 1ZL3|1|B | Title: Coupling of active site motions and RNA binding | X-RAY DIFFRACTION | 2.8 | 21 | ||
| 3 | 1ZE2|1|D | Title: Conformational change of pseudouridine 55 synthase upon its association with RNA substrate | X-RAY DIFFRACTION | 3 | 21 | ||
| 4 | 1ZE2|1|C | Title: Conformational change of pseudouridine 55 synthase upon its association with RNA substrate | X-RAY DIFFRACTION | 3 | 21 | ||
| 5 | 2AB4|1|B | Title: Dissecting the Roles of a Strictly Conserved Tyrosine in Substrate Recognition and Catalysis by Pseudouridine 55 Synthase | X-RAY DIFFRACTION | 2.4 | 19 |
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