Equivalence class NR_4.0_76933.1 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 2UU9|1|Y+ 2UU9|1|X (rep) | RNA | Thermus thermophilus | Bacteria | Structure of the Thermus thermophilus 30S ribosomal subunit complexed with a Valine-ASL with cmo5U in position 34 bound to an mRNA with a GUG-codon in the A-site and paromomycin. | X-ray diffraction | 3.1 | 2007-05-15 | ||
| 2 | 2UUA|1|Y+ 2UUA|1|X | 5'-R(*CP*CP*UP*CP*CP*CP*UP*CM0P*AP*CP*6MZP*AP *GP*GP*AP*GP*G)-3', 5'-R(*GP*UP*CP*AP*AP*AP)-3' | Thermus thermophilus | Bacteria | Structure of the Thermus thermophilus 30S ribosomal subunit complexed with a Valine-ASL with cmo5U in position 34 bound to an mRNA with a GUC-codon in the A-site and paromomycin. | X-ray diffraction | 2.9 | 2007-05-15 | ||
| 3 | 2UUC|1|Y+ 2UUC|1|X | 5'-R(*CP*CP*UP*CP*CP*CP*UP*CM0P*AP*CP*6MZP*AP *GP*GP*AP*GP*G)-3', 5'-R(*GP*UP*AP*AP*AP*AP)-3' | Synthetic | Structure of the Thermus thermophilus 30S ribosomal subunit complexed with a Valine-ASL with cmo5U in position 34 bound to an mRNA with a GUA-codon in the A-site and paromomycin. | X-ray diffraction | 3.1 | 2007-05-22 | |||
| 4 | 2UUB|1|Y+ 2UUB|1|X | 5'-R(*CP*CP*UP*CP*CP*CP*UP*CM0P*AP*CP*6MZP*AP *GP*GP*AP*GP*G)-3', 5'-R(*GP*UP*UP*AP*AP*AP)-3' | synthetic construct | Synthetic | Structure of the Thermus thermophilus 30S ribosomal subunit complexed with a Valine-ASL with cmo5U in position 34 bound to an mRNA with a GUU-codon in the A-site and paromomycin. | X-ray diffraction | 2.8 | 2007-05-15 |
Release history
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
|---|---|---|---|---|---|
| NR_4.0_76933.1 | NR_4.0_76933.1 | 8.0 | (4) 2UU9|1|Y+2UU9|1|X, 2UUA|1|Y+2UUA|1|X, 2UUB|1|Y+2UUB|1|X, 2UUC|1|Y+2UUC|1|X | (0) | (0) |
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
|---|
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length | NAKB_NA_annotation | NAKB_protein_annotation |
|---|---|---|---|---|---|---|---|
| 1 | 2UUB|1|Y+2UUB|1|X | Title: Structure of the Thermus thermophilus 30S ribosomal subunit complexed with a Valine-ASL with cmo5U in position 34 bound to an mRNA with a GUU-codon in the A-site and paromomycin. | X-RAY DIFFRACTION | 2.8 | 9 | ||
| 2 | 2UU9|1|Y+2UU9|1|X | Title: Structure of the Thermus thermophilus 30S ribosomal subunit complexed with a Valine-ASL with cmo5U in position 34 bound to an mRNA with a GUG-codon in the A-site and paromomycin. | X-RAY DIFFRACTION | 3.1 | 11 | ||
| 3 | 2UUA|1|Y+2UUA|1|X | Title: Structure of the Thermus thermophilus 30S ribosomal subunit complexed with a Valine-ASL with cmo5U in position 34 bound to an mRNA with a GUC-codon in the A-site and paromomycin. | X-RAY DIFFRACTION | 2.9 | 11 | ||
| 4 | 2UUC|1|Y+2UUC|1|X | Title: Structure of the Thermus thermophilus 30S ribosomal subunit complexed with a Valine-ASL with cmo5U in position 34 bound to an mRNA with a GUA-codon in the A-site and paromomycin. | X-RAY DIFFRACTION | 3.1 | 11 |
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