Equivalence class NR_4.0_72176.1 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 4V9F|1|9 (rep) | 5S ribosomal RNA | 5S Ribosomal RNA | Haloarcula marismortui | Archaea | RF00001 | The re-refined crystal structure of the Haloarcula marismortui large ribosomal subunit at 2.4 Angstrom resolution: more complete structure of the L7/L12 and L1 stalk, L5 and LX proteins | X-ray diffraction | 2.4 | 2014-07-09 |
| 2 | 1S72|1|9 | 5S ribosomal RNA | 5S ribosomal RNA | Haloarcula marismortui | Archaea | RF00001 | REFINED CRYSTAL STRUCTURE OF THE HALOARCULA MARISMORTUI LARGE RIBOSOMAL SUBUNIT AT 2.4 ANGSTROM RESOLUTION | X-ray diffraction | 2.4 | 2004-06-15 |
| 3 | 1YI2|1|9 | 5S ribosomal RNA | 5S Ribosomal RNA | Haloarcula marismortui | Archaea | RF00001 | Crystal Structure Of Erythromycin Bound To The G2099A Mutant 50S Ribosomal Subunit Of Haloarcula Marismortui | X-ray diffraction | 2.65 | 2005-04-26 |
| 4 | 1JJ2|1|9 | 5S ribosomal RNA | 5S RRNA | Haloarcula marismortui | Archaea | RF00001 | Fully Refined Crystal Structure of the Haloarcula marismortui Large Ribosomal Subunit at 2.4 Angstrom Resolution | X-ray diffraction | 2.4 | 2001-08-01 |
| 5 | 3CCL|1|9 | 5S ribosomal RNA | 5S RIBOSOMAL RNA | Haloarcula marismortui | Archaea | RF00001 | Structure of Anisomycin resistant 50S Ribosomal Subunit: 23S rRNA mutation U2535C. Density for Anisomycin is visible but not included in model. | X-ray diffraction | 2.9 | 2008-05-20 |
| 6 | 3CCU|1|9 | 5S ribosomal RNA | 5S RIBOSOMAL RNA | Haloarcula marismortui | Archaea | RF00001 | Structure of Anisomycin resistant 50S Ribosomal Subunit: 23S rRNA mutation G2482C | X-ray diffraction | 2.8 | 2008-05-20 |
| 7 | 1YIJ|1|9 | 5S ribosomal RNA | 5S Ribosomal RNA | Haloarcula marismortui | Archaea | RF00001 | Crystal Structure Of Telithromycin Bound To The G2099A Mutant 50S Ribosomal Subunit Of Haloarcula Marismortui | X-ray diffraction | 2.6 | 2005-04-26 |
| 8 | 3G71|1|9 | 5S ribosomal RNA | 5S ribosomal RNA | Haloarcula marismortui | Archaea | RF00001 | Co-crystal structure of Bruceantin bound to the large ribosomal subunit | X-ray diffraction | 2.85 | 2009-04-28 |
| 9 | 1YHQ|1|9 | 5S ribosomal RNA | 5S Ribosomal RNA | Haloarcula marismortui | Archaea | RF00001 | Crystal Structure Of Azithromycin Bound To The G2099A Mutant 50S Ribosomal Subunit Of Haloarcula Marismortui | X-ray diffraction | 2.4 | 2005-04-26 |
| 10 | 3CMA|1|9 | 5S ribosomal RNA | 5S RIBOSOMAL RNA | Haloarcula marismortui | Archaea | RF00001 | The structure of CCA and CCA-Phe-Cap-Bio bound to the large ribosomal subunit of Haloarcula marismortui | X-ray diffraction | 2.8 | 2008-09-23 |
| 11 | 3G6E|1|9 | 5S ribosomal RNA | 5S ribosomal RNA | Haloarcula marismortui | Archaea | RF00001 | Co-crystal structure of Homoharringtonine bound to the large ribosomal subunit | X-ray diffraction | 2.7 | 2009-04-28 |
| 12 | 1YJW|1|9 | 5S ribosomal RNA | 5S RIBOSOMAL RNA | Haloarcula marismortui | Archaea | RF00001 | Crystal Structure Of Quinupristin Bound To The G2099A Mutant 50S Ribosomal Subunit Of Haloarcula Marismortui | X-ray diffraction | 2.9 | 2005-04-26 |
| 13 | 3I56|1|9 | 5S ribosomal RNA | 5S ribosomal RNA | Haloarcula marismortui | Archaea | RF00001 | Co-crystal structure of Triacetyloleandomcyin Bound to the Large Ribosomal Subunit | X-ray diffraction | 2.9 | 2010-03-09 |
| 14 | 3CCV|1|9 | 5S ribosomal RNA | 5S RIBOSOMAL RNA | Haloarcula marismortui | Archaea | RF00001 | Structure of Anisomycin resistant 50S Ribosomal Subunit: 23S rRNA mutation G2616A | X-ray diffraction | 2.9 | 2008-05-20 |
| 15 | 3CD6|1|9 | 5S ribosomal RNA | 5S RIBOSOMAL RNA | Haloarcula marismortui | Archaea | RF00001 | Co-cystal of large Ribosomal Subunit mutant G2616A with CC-Puromycin | X-ray diffraction | 2.75 | 2008-05-20 |
| 16 | 2QEX|1|9 | 5S ribosomal RNA | 5S ribosomal RNA | Haloarcula marismortui | Archaea | RF00001 | Negamycin Binds to the Wall of the Nascent Chain Exit Tunnel of the 50S Ribosomal Subunit | X-ray diffraction | 2.9 | 2008-09-30 |
| 17 | 3CCM|1|9 | 5S ribosomal RNA | 5S RIBOSOMAL RNA | Haloarcula marismortui | Archaea | RF00001 | Structure of Anisomycin resistant 50S Ribosomal Subunit: 23S rRNA mutation G2611U | X-ray diffraction | 2.55 | 2008-05-20 |
| 18 | 1YJ9|1|9 | 5S ribosomal RNA | 5S Ribosomal RNA | Haloarcula marismortui | Archaea | RF00001 | Crystal Structure Of The Mutant 50S Ribosomal Subunit Of Haloarcula Marismortui Containing a three residue deletion in L22 | X-ray diffraction | 2.8 | 2005-04-26 |
| 19 | 3CC4|1|9 | 5S ribosomal RNA | 5S ribosomal RNA | Haloarcula marismortui | Archaea | RF00001 | Co-crystal Structure of Anisomycin Bound to the 50S Ribosomal Subunit | X-ray diffraction | 2.7 | 2008-05-20 |
| 20 | 1YJN|1|9 | 5S ribosomal RNA | 5S Ribosomal RNA | Haloarcula marismortui | Archaea | RF00001 | Crystal Structure Of Clindamycin Bound To The G2099A Mutant 50S Ribosomal Subunit Of Haloarcula Marismortui | X-ray diffraction | 3 | 2005-04-26 |
| 21 | 2OTL|1|9 | 5S ribosomal RNA | 5S ribosomal RNA | Haloarcula marismortui | Archaea | RF00001 | Girodazole bound to the large subunit of Haloarcula marismortui | X-ray diffraction | 2.7 | 2007-04-03 |
| 22 | 1YIT|1|9 | 5S ribosomal RNA | 5S RIBOSOMAL RNA | Haloarcula marismortui | Archaea | RF00001 | Crystal Structure Of Virginiamycin M and S Bound To The 50S Ribosomal Subunit Of Haloarcula Marismortui | X-ray diffraction | 2.8 | 2005-04-26 |
| 23 | 3CC2|1|9 | 5S ribosomal RNA | 5S RIBOSOMAL RNA | Haloarcula marismortui | Archaea | RF00001 | The Refined Crystal Structure of the Haloarcula Marismortui Large Ribosomal Subunit at 2.4 Angstrom Resolution with rrnA Sequence for the 23S rRNA and Genome-derived Sequences for r-Proteins | X-ray diffraction | 2.4 | 2008-05-20 |
| 24 | 3CCS|1|9 | 5S ribosomal RNA | 5S RIBOSOMAL RNA | Haloarcula marismortui | Archaea | RF00001 | Structure of Anisomycin resistant 50S Ribosomal Subunit: 23S rRNA mutation G2482A | X-ray diffraction | 2.95 | 2008-05-20 |
| 25 | 2OTJ|1|9 | 5S ribosomal RNA | 5S ribosomal RNA | Haloarcula marismortui | Archaea | RF00001 | 13-deoxytedanolide bound to the large subunit of Haloarcula marismortui | X-ray diffraction | 2.9 | 2007-04-03 |
| 26 | 3CCQ|1|9 | 5S ribosomal RNA | 5S RIBOSOMAL RNA | Haloarcula marismortui | Archaea | RF00001 | Structure of Anisomycin resistant 50S Ribosomal Subunit: 23S rRNA mutation A2488U | X-ray diffraction | 2.9 | 2008-05-20 |
| 27 | 3CME|1|9 | 5S ribosomal RNA | 5S RIBOSOMAL RNA | Haloarcula marismortui | Archaea | RF00001 | The Structure of CA and CCA-PHE-CAP-BIO Bound to the Large Ribosomal Subunit of Haloarcula Marismortui | X-ray diffraction | 2.95 | 2008-09-23 |
| 28 | 1KQS|1|9 | 5S ribosomal RNA | 5S RRNA | Haloarcula marismortui | Archaea | RF00001 | The Haloarcula marismortui 50S Complexed with a Pretranslocational Intermediate in Protein Synthesis | X-ray diffraction | 3.1 | 2002-02-22 |
| 29 | 3CC7|1|9 | 5S ribosomal RNA | 5S ribosomal RNA | Haloarcula marismortui | Archaea | RF00001 | Structure of Anisomycin resistant 50S Ribosomal Subunit: 23S rRNA mutation C2487U | X-ray diffraction | 2.7 | 2008-05-20 |
| 30 | 3CCR|1|9 | 5S ribosomal RNA | 5S RIBOSOMAL RNA | Haloarcula marismortui | Archaea | RF00001 | Structure of Anisomycin resistant 50S Ribosomal Subunit: 23S rRNA mutation A2488C. Density for anisomycin is visible but not included in the model. | X-ray diffraction | 3 | 2008-05-20 |
| 31 | 3G4S|1|9 | 5S ribosomal RNA | 5S ribosomal RNA | Haloarcula marismortui | Archaea | RF00001 | Co-crystal structure of Tiamulin bound to the large ribosomal subunit | X-ray diffraction | 3.2 | 2009-04-28 |
| 32 | 3I55|1|9 | 5S ribosomal RNA | 5S ribosomal RNA | Haloarcula marismortui | Archaea | RF00001 | Co-crystal structure of Mycalamide A Bound to the Large Ribosomal Subunit | X-ray diffraction | 3.11 | 2010-03-09 |
| 33 | 3CCJ|1|9 | 5S ribosomal RNA | 5S RIBOSOMAL RNA | Haloarcula marismortui | Archaea | RF00001 | Structure of Anisomycin resistant 50S Ribosomal Subunit: 23S rRNA mutation C2534U | X-ray diffraction | 3.3 | 2008-05-20 |
| 34 | 2QA4|1|9 | 5S ribosomal RNA | 5S RIBOSOMAL RNA | Haloarcula marismortui | Archaea | RF00001 | A more complete structure of the the L7/L12 stalk of the Haloarcula marismortui 50S large ribosomal subunit | X-ray diffraction | 3 | 2008-04-01 |
| 35 | 3CCE|1|9 | 5S ribosomal RNA | 5S RIBOSOMAL RNA | Haloarcula marismortui | Archaea | RF00001 | Structure of Anisomycin resistant 50S Ribosomal Subunit: 23S rRNA mutation U2535A | X-ray diffraction | 2.75 | 2008-05-20 |
| 36 | 3OW2|1|9 | 5S ribosomal RNA | 5S RIBOSOMAL RNA | Haloarcula marismortui | Archaea | RF00001 | Crystal Structure of Enhanced Macrolide Bound to 50S Ribosomal Subunit | X-ray diffraction | 2.7 | 2012-06-20 |
| 37 | 1VQ8|1|9 | 5S ribosomal RNA | 5S ribosomal RNA | Haloarcula marismortui | Archaea | RF00001 | The structure of CCDA-PHE-CAP-BIO and the antibiotic sparsomycin bound to the large ribosomal subunit of haloarcula marismortui | X-ray diffraction | 2.2 | 2005-11-29 |
| 38 | 1VQO|1|9 | 5S ribosomal RNA | 5S ribosomal RNA | Haloarcula marismortui | Archaea | RF00001 | The structure of CCPMN bound to the large ribosomal subunit haloarcula marismortui | X-ray diffraction | 2.2 | 2005-11-29 |
| 39 | 1VQM|1|9 | 5S ribosomal RNA | 5S ribosomal RNA | Haloarcula marismortui | Archaea | RF00001 | The structure of the transition state analogue 'DAN' bound to the large ribosomal subunit of haloarcula marismortui | X-ray diffraction | 2.3 | 2005-11-29 |
| 40 | 1VQK|1|9 | 5S ribosomal RNA | 5S ribosomal RNA | Haloarcula marismortui | Archaea | RF00001 | The structure of CCDA-PHE-CAP-BIO bound to the a site of the ribosomal subunit of haloarcula marismortui | X-ray diffraction | 2.3 | 2005-11-29 |
| 41 | 1VQL|1|9 | 5S ribosomal RNA | 5S ribosomal RNA | Haloarcula marismortui | Archaea | RF00001 | The structure of the transition state analogue 'DCSN' bound to the large ribosomal subunit of haloarcula marismortui | X-ray diffraction | 2.3 | 2005-11-29 |
| 42 | 1VQ9|1|9 | 5S ribosomal RNA | 5S ribosomal RNA | Haloarcula marismortui | Archaea | RF00001 | The structure of CCA-PHE-CAP-BIO and the antibiotic sparsomycin bound to the large ribosomal subunit of haloarcula marismortui | X-ray diffraction | 2.4 | 2005-11-29 |
| 43 | 1VQP|1|9 | 5S ribosomal RNA | 5S ribosomal RNA | Haloarcula marismortui | Archaea | RF00001 | The structure of the transition state analogue 'RAP' bound to the large ribosomal subunit of haloarcula marismortui | X-ray diffraction | 2.25 | 2005-11-29 |
| 44 | 1VQ7|1|9 | 5S ribosomal RNA | 5S ribosomal RNA | Haloarcula marismortui | Archaea | RF00001 | The structure of the transition state analogue 'DCA' bound to the large ribosomal subunit of haloarcula marismortui | X-ray diffraction | 2.5 | 2005-11-29 |
| 45 | 1VQN|1|9 | 5S ribosomal RNA | 5S ribosomal RNA | Haloarcula marismortui | Archaea | RF00001 | The structure of CC-HPMN AND CCA-PHE-CAP-BIO bound to the large ribosomal subunit of haloarcula marismortui | X-ray diffraction | 2.4 | 2005-11-29 |
| 46 | 1VQ4|1|9 | 5S ribosomal RNA | 5S ribosomal RNA | Haloarcula marismortui | Archaea | RF00001 | The structure of the transition state analogue 'DAA' bound to the large ribosomal subunit of Haloarcula marismortui | X-ray diffraction | 2.7 | 2005-11-29 |
| 47 | 1VQ6|1|9 | 5S ribosomal RNA | 5S ribosomal RNA | Haloarcula marismortui | Archaea | RF00001 | The structure of c-hpmn and CCA-PHE-CAP-BIO bound to the large ribosomal subunit of haloarcula marismortui | X-ray diffraction | 2.7 | 2005-11-29 |
| 48 | 1M90|1|B | 5S ribosomal RNA | 5S RRNA | Haloarcula marismortui | Archaea | RF00001 | Co-crystal structure of CCA-Phe-caproic acid-biotin and sparsomycin bound to the 50S ribosomal subunit | X-ray diffraction | 2.8 | 2002-09-06 |
| 49 | 1QVG|1|9 | 5S ribosomal RNA | 5S ribosomal RNA | Haloarcula marismortui | Archaea | RF00001 | Structure of CCA oligonucleotide bound to the tRNA binding sites of the large ribosomal subunit of Haloarcula marismortui | X-ray diffraction | 2.9 | 2003-11-11 |
| 50 | 1VQ5|1|9 | 5S ribosomal RNA | 5S ribosomal RNA | Haloarcula marismortui | Archaea | RF00001 | The structure of the transition state analogue 'RAA' bound to the large ribosomal subunit of haloarcula marismortui | X-ray diffraction | 2.6 | 2005-11-29 |
| 51 | 1NJI|1|B | 5S ribosomal RNA | 5S ribosomal RNA | Haloarcula marismortui | Archaea | RF00001 | Structure of chloramphenicol bound to the 50S ribosomal subunit | X-ray diffraction | 3 | 2003-07-22 |
| 52 | 3CXC|1|9 | 5S ribosomal RNA | 5S RIBOSOMAL RNA | Haloarcula marismortui | Archaea | RF00001 | The structure of an enhanced oxazolidinone inhibitor bound to the 50S ribosomal subunit of H. marismortui | X-ray diffraction | 3 | 2009-04-28 |
| 53 | 3CPW|1|9 | 5S ribosomal RNA | 5S RIBOSOMAL RNA | Haloarcula marismortui | Archaea | RF00001 | The structure of the antibiotic LINEZOLID bound to the large ribosomal subunit of HALOARCULA MARISMORTUI | X-ray diffraction | 2.7 | 2008-07-22 |
| 54 | 1Q81|1|B | 5S ribosomal RNA | 5S ribosomal RNA | Haloarcula marismortui | Archaea | RF00001 | Crystal Structure of minihelix with 3' puromycin bound to A-site of the 50S ribosomal subunit. | X-ray diffraction | 2.95 | 2003-10-07 |
| 55 | 1Q86|1|B | 5S ribosomal RNA | 5S ribosomal RNA | Haloarcula marismortui | Archaea | RF00001 | Crystal structure of CCA-Phe-cap-biotin bound simultaneously at half occupancy to both the A-site and P-site of the the 50S ribosomal Subunit. | X-ray diffraction | 3 | 2003-10-07 |
| 56 | 1KC8|1|B | 5S ribosomal RNA | 5S RRNA | Haloarcula marismortui | Archaea | RF00001 | Co-crystal Structure of Blasticidin S Bound to the 50S Ribosomal Subunit | X-ray diffraction | 3.01 | 2003-07-22 |
| 57 | 1K73|1|B | 5S ribosomal RNA | 5S RRNA | Haloarcula marismortui | Archaea | RF00001 | Co-crystal Structure of Anisomycin Bound to the 50S Ribosomal Subunit | X-ray diffraction | 3.01 | 2003-07-22 |
| 58 | 1Q82|1|B | 5S ribosomal RNA | 5S ribosomal RNA | Haloarcula marismortui | Archaea | RF00001 | Crystal Structure of CC-Puromycin bound to the A-site of the 50S ribosomal subunit | X-ray diffraction | 2.98 | 2003-10-07 |
| 59 | 1K9M|1|B | 5S ribosomal RNA | 5S RRNA | Haloarcula marismortui | Archaea | RF00001 | Co-crystal structure of tylosin bound to the 50S ribosomal subunit of Haloarcula marismortui | X-ray diffraction | 3 | 2002-07-19 |
| 60 | 1QVF|1|9 | 5S ribosomal RNA | 5S ribosomal RNA | Haloarcula marismortui | Archaea | RF00001 | Structure of a deacylated tRNA minihelix bound to the E site of the large ribosomal subunit of Haloarcula marismortui | X-ray diffraction | 3.1 | 2003-11-11 |
| 61 | 1M1K|1|B | 5S ribosomal RNA | 5S RRNA | Haloarcula marismortui | Archaea | RF00001 | Co-crystal structure of azithromycin bound to the 50S ribosomal subunit of Haloarcula marismortui | X-ray diffraction | 3.2 | 2002-07-19 |
| 62 | 1KD1|1|B | 5S ribosomal RNA | 5S RRNA | Haloarcula marismortui | Archaea | RF00001 | Co-crystal Structure of Spiramycin bound to the 50S Ribosomal Subunit of Haloarcula marismortui | X-ray diffraction | 3 | 2002-07-19 |
| 63 | 1K8A|1|B | 5S ribosomal RNA | 5S RRNA | Haloarcula marismortui | Archaea | RF00001 | Co-crystal structure of Carbomycin A bound to the 50S ribosomal subunit of Haloarcula marismortui | X-ray diffraction | 3 | 2002-07-19 |
| 64 | 1Q7Y|1|B | 5S ribosomal RNA | 5S ribosomal RNA | Haloarcula marismortui | Archaea | RF00001 | Crystal Structure of CCdAP-Puromycin bound at the Peptidyl transferase center of the 50S ribosomal subunit | X-ray diffraction | 3.2 | 2003-10-07 |
| 65 | 1FFK|1|9 | 5S ribosomal RNA | 5S RRNA | Haloarcula marismortui | Archaea | RF00001 | CRYSTAL STRUCTURE OF THE LARGE RIBOSOMAL SUBUNIT FROM HALOARCULA MARISMORTUI AT 2.4 ANGSTROM RESOLUTION | X-ray diffraction | 2.4 | 2000-08-14 |
| 66 | 1N8R|1|B | 5S ribosomal RNA | 5S ribosomal RNA | Haloarcula marismortui | Archaea | RF00001 | Structure of large ribosomal subunit in complex with virginiamycin M | X-ray diffraction | 3 | 2003-07-22 |
| 67 | 1W2B|1|9 | 5S ribosomal RNA | 5S RRNA | Haloarcula marismortui | Archaea | RF00001 | Trigger Factor ribosome binding domain in complex with 50S | X-ray diffraction | 3.5 | 2004-09-02 |
Release history
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
|---|---|---|---|---|---|
| NR_4.0_72176.1 | NR_4.0_72176.1 | 8.0 | (67) 4V9F|1|9, 3CCL|1|9, 3CCJ|1|9, 3CCE|1|9, 3CC7|1|9, 3CC4|1|9, 3CC2|1|9, 2QEX|1|9, 2QA4|1|9, 2OTL|1|9, 2OTJ|1|9, 1YJW|1|9, 1YJN|1|9, 1YJ9|1|9, 1YIT|1|9, 3CCM|1|9, 3CCQ|1|9, 3CCR|1|9, 3OW2|1|9, 3I56|1|9, 3I55|1|9, 3G71|1|9, 3G6E|1|9, 3G4S|1|9, 3CXC|1|9, 3CPW|1|9, 3CME|1|9, 3CMA|1|9, 3CD6|1|9, 3CCV|1|9, 3CCU|1|9, 3CCS|1|9, 1YIJ|1|9, 1YI2|1|9, 1YHQ|1|9, 1Q82|1|B, 1Q81|1|B, 1Q7Y|1|B, 1NJI|1|B, 1N8R|1|B, 1M90|1|B, 1M1K|1|B, 1KQS|1|9, 1KD1|1|B, 1KC8|1|B, 1K9M|1|B, 1K8A|1|B, 1K73|1|B, 1JJ2|1|9, 1Q86|1|B, 1QVF|1|9, 1QVG|1|9, 1W2B|1|9, 1VQP|1|9, 1VQO|1|9, 1VQN|1|9, 1VQM|1|9, 1VQL|1|9, 1VQK|1|9, 1VQ9|1|9, 1VQ8|1|9, 1VQ7|1|9, 1VQ6|1|9, 1VQ5|1|9, 1VQ4|1|9, 1S72|1|9, 1FFK|1|9 | (0) | (0) |
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
|---|---|---|---|---|---|
| NR_4.0_72176.1 | NR_4.0_72176.2 | 9.16 | (64) 1VQK|1|9, 3OW2|1|9, 1YHQ|1|9, 2OTJ|1|9, 1K9M|1|B, 3CC4|1|9, 1M90|1|B, 3CCM|1|9, 1Q82|1|B, 3CD6|1|9, 1VQ5|1|9, 3G4S|1|9, 3I55|1|9, 1VQP|1|9, 1YIT|1|9, 1JJ2|1|9, 2QEX|1|9, 1KQS|1|9, 3CCJ|1|9, 1Q7Y|1|B, 3CCS|1|9, 1QVG|1|9, 3CPW|1|9, 1VQ8|1|9, 3G6E|1|9, 1VQN|1|9, 4V9F|1|9, 1YI2|1|9, 3CC7|1|9, 1N8R|1|B, 3CCQ|1|9, 1Q86|1|B, 3I56|1|9, 1W2B|1|9, 1YJ9|1|9, 1K73|1|B, 3CCL|1|9, 1Q81|1|B, 3CCU|1|9, 1S72|1|9, 1YIJ|1|9, 1FFK|1|9, 2OTL|1|9, 1KC8|1|B, 3CCR|1|9, 1QVF|1|9, 3CMA|1|9, 1VQ6|1|9, 1YJN|1|9, 1K8A|1|B, 3CC2|1|9, 1M1K|1|B, 3CCV|1|9, 1VQ4|1|9, 3CXC|1|9, 1VQ9|1|9, 3G71|1|9, 1VQO|1|9, 2QA4|1|9, 1KD1|1|B, 3CCE|1|9, 1NJI|1|B, 3CME|1|9, 1VQ7|1|9 | (3) 1VQM|1|9, 1YJW|1|9, 1VQL|1|9 | (0) |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length | NAKB_NA_annotation | NAKB_protein_annotation |
|---|---|---|---|---|---|---|---|
| 1 | 1FFK|1|9 | Title: CRYSTAL STRUCTURE OF THE LARGE RIBOSOMAL SUBUNIT FROM HALOARCULA MARISMORTUI AT 2.4 ANGSTROM RESOLUTION | X-RAY DIFFRACTION | 2.4 | 122 | ||
| 2 | 2QEX|1|9 | Title: Negamycin Binds to the Wall of the Nascent Chain Exit Tunnel of the 50S Ribosomal Subunit | X-RAY DIFFRACTION | 2.9 | 122 | ||
| 3 | 2QA4|1|9 | Title: A more complete structure of the the L7/L12 stalk of the Haloarcula marismortui 50S large ribosomal subunit | X-RAY DIFFRACTION | 3 | 122 | ||
| 4 | 1VQ4|1|9 | Title: The structure of the transition state analogue 'DAA' bound to the large ribosomal subunit of Haloarcula marismortui | X-RAY DIFFRACTION | 2.7 | 122 | ||
| 5 | 2OTL|1|9 | Title: Girodazole bound to the large subunit of Haloarcula marismortui | X-RAY DIFFRACTION | 2.7 | 122 | ||
| 6 | 1YJ9|1|9 | Title: Crystal Structure Of The Mutant 50S Ribosomal Subunit Of Haloarcula Marismortui Containing a three residue deletion in L22 | X-RAY DIFFRACTION | 2.8 | 122 | ||
| 7 | 1YIT|1|9 | Title: Crystal Structure Of Virginiamycin M and S Bound To The 50S Ribosomal Subunit Of Haloarcula Marismortui | X-RAY DIFFRACTION | 2.8 | 122 | ||
| 8 | 1YJN|1|9 | Title: Crystal Structure Of Clindamycin Bound To The G2099A Mutant 50S Ribosomal Subunit Of Haloarcula Marismortui | X-RAY DIFFRACTION | 3 | 122 | ||
| 9 | 1YJW|1|9 | Title: Crystal Structure Of Quinupristin Bound To The G2099A Mutant 50S Ribosomal Subunit Of Haloarcula Marismortui | X-RAY DIFFRACTION | 2.9 | 122 | ||
| 10 | 1YIJ|1|9 | Title: Crystal Structure Of Telithromycin Bound To The G2099A Mutant 50S Ribosomal Subunit Of Haloarcula Marismortui | X-RAY DIFFRACTION | 2.6 | 122 | ||
| 11 | 1YI2|1|9 | Title: Crystal Structure Of Erythromycin Bound To The G2099A Mutant 50S Ribosomal Subunit Of Haloarcula Marismortui | X-RAY DIFFRACTION | 2.65 | 122 | ||
| 12 | 1VQ6|1|9 | Title: The structure of c-hpmn and CCA-PHE-CAP-BIO bound to the large ribosomal subunit of haloarcula marismortui | X-RAY DIFFRACTION | 2.7 | 122 | ||
| 13 | 1VQ5|1|9 | Title: The structure of the transition state analogue 'RAA' bound to the large ribosomal subunit of haloarcula marismortui | X-RAY DIFFRACTION | 2.6 | 122 | ||
| 14 | 1VQ7|1|9 | Title: The structure of the transition state analogue 'DCA' bound to the large ribosomal subunit of haloarcula marismortui | X-RAY DIFFRACTION | 2.5 | 122 | ||
| 15 | 1S72|1|9 | Title: REFINED CRYSTAL STRUCTURE OF THE HALOARCULA MARISMORTUI LARGE RIBOSOMAL SUBUNIT AT 2.4 ANGSTROM RESOLUTION | X-RAY DIFFRACTION | 2.4 | 122 | ||
| 16 | 2OTJ|1|9 | Title: 13-deoxytedanolide bound to the large subunit of Haloarcula marismortui | X-RAY DIFFRACTION | 2.9 | 122 | ||
| 17 | 3CME|1|9 | Title: The Structure of CA and CCA-PHE-CAP-BIO Bound to the Large Ribosomal Subunit of Haloarcula Marismortui | X-RAY DIFFRACTION | 2.95 | 122 | ||
| 18 | 3CMA|1|9 | Title: The structure of CCA and CCA-Phe-Cap-Bio bound to the large ribosomal subunit of Haloarcula marismortui | X-RAY DIFFRACTION | 2.8 | 122 | ||
| 19 | 1VQ9|1|9 | Title: The structure of CCA-PHE-CAP-BIO and the antibiotic sparsomycin bound to the large ribosomal subunit of haloarcula marismortui | X-RAY DIFFRACTION | 2.4 | 122 | ||
| 20 | 1VQL|1|9 | Title: The structure of the transition state analogue 'DCSN' bound to the large ribosomal subunit of haloarcula marismortui | X-RAY DIFFRACTION | 2.3 | 122 | ||
| 21 | 1VQP|1|9 | Title: The structure of the transition state analogue 'RAP' bound to the large ribosomal subunit of haloarcula marismortui | X-RAY DIFFRACTION | 2.25 | 122 | ||
| 22 | 1VQN|1|9 | Title: The structure of CC-HPMN AND CCA-PHE-CAP-BIO bound to the large ribosomal subunit of haloarcula marismortui | X-RAY DIFFRACTION | 2.4 | 122 | ||
| 23 | 1VQM|1|9 | Title: The structure of the transition state analogue 'DAN' bound to the large ribosomal subunit of haloarcula marismortui | X-RAY DIFFRACTION | 2.3 | 122 | ||
| 24 | 1VQ8|1|9 | Title: The structure of CCDA-PHE-CAP-BIO and the antibiotic sparsomycin bound to the large ribosomal subunit of haloarcula marismortui | X-RAY DIFFRACTION | 2.2 | 122 | ||
| 25 | 1VQK|1|9 | Title: The structure of CCDA-PHE-CAP-BIO bound to the a site of the ribosomal subunit of haloarcula marismortui | X-RAY DIFFRACTION | 2.3 | 122 | ||
| 26 | 1VQO|1|9 | Title: The structure of CCPMN bound to the large ribosomal subunit haloarcula marismortui | X-RAY DIFFRACTION | 2.2 | 122 | ||
| 27 | 3CCM|1|9 | Title: Structure of Anisomycin resistant 50S Ribosomal Subunit: 23S rRNA mutation G2611U | X-RAY DIFFRACTION | 2.55 | 122 | ||
| 28 | 1YHQ|1|9 | Title: Crystal Structure Of Azithromycin Bound To The G2099A Mutant 50S Ribosomal Subunit Of Haloarcula Marismortui | X-RAY DIFFRACTION | 2.4 | 122 | ||
| 29 | 3CC2|1|9 | Title: The Refined Crystal Structure of the Haloarcula Marismortui Large Ribosomal Subunit at 2.4 Angstrom Resolution with rrnA Sequence for the 23S rRNA and Genome-derived Sequences for r-Proteins | X-RAY DIFFRACTION | 2.4 | 122 | ||
| 30 | 3I56|1|9 | Title: Co-crystal structure of Triacetyloleandomcyin Bound to the Large Ribosomal Subunit | X-RAY DIFFRACTION | 2.9 | 122 | ||
| 31 | 3I55|1|9 | Title: Co-crystal structure of Mycalamide A Bound to the Large Ribosomal Subunit | X-RAY DIFFRACTION | 3.11 | 122 | ||
| 32 | 3G71|1|9 | Title: Co-crystal structure of Bruceantin bound to the large ribosomal subunit | X-RAY DIFFRACTION | 2.85 | 122 | ||
| 33 | 3G6E|1|9 | Title: Co-crystal structure of Homoharringtonine bound to the large ribosomal subunit | X-RAY DIFFRACTION | 2.7 | 122 | ||
| 34 | 3CC4|1|9 | Title: Co-crystal Structure of Anisomycin Bound to the 50S Ribosomal Subunit | X-RAY DIFFRACTION | 2.7 | 122 | ||
| 35 | 3CCV|1|9 | Title: Structure of Anisomycin resistant 50S Ribosomal Subunit: 23S rRNA mutation G2616A | X-RAY DIFFRACTION | 2.9 | 122 | ||
| 36 | 3CCQ|1|9 | Title: Structure of Anisomycin resistant 50S Ribosomal Subunit: 23S rRNA mutation A2488U | X-RAY DIFFRACTION | 2.9 | 122 | ||
| 37 | 3CCU|1|9 | Title: Structure of Anisomycin resistant 50S Ribosomal Subunit: 23S rRNA mutation G2482C | X-RAY DIFFRACTION | 2.8 | 122 | ||
| 38 | 3CCL|1|9 | Title: Structure of Anisomycin resistant 50S Ribosomal Subunit: 23S rRNA mutation U2535C. Density for Anisomycin is visible but not included in model. | X-RAY DIFFRACTION | 2.9 | 122 | ||
| 39 | 3CD6|1|9 | Title: Co-cystal of large Ribosomal Subunit mutant G2616A with CC-Puromycin | X-RAY DIFFRACTION | 2.75 | 122 | ||
| 40 | 3CCS|1|9 | Title: Structure of Anisomycin resistant 50S Ribosomal Subunit: 23S rRNA mutation G2482A | X-RAY DIFFRACTION | 2.95 | 122 | ||
| 41 | 3CCR|1|9 | Title: Structure of Anisomycin resistant 50S Ribosomal Subunit: 23S rRNA mutation A2488C. Density for anisomycin is visible but not included in the model. | X-RAY DIFFRACTION | 3 | 122 | ||
| 42 | 3CCE|1|9 | Title: Structure of Anisomycin resistant 50S Ribosomal Subunit: 23S rRNA mutation U2535A | X-RAY DIFFRACTION | 2.75 | 122 | ||
| 43 | 3CC7|1|9 | Title: Structure of Anisomycin resistant 50S Ribosomal Subunit: 23S rRNA mutation C2487U | X-RAY DIFFRACTION | 2.7 | 122 | ||
| 44 | 3CCJ|1|9 | Title: Structure of Anisomycin resistant 50S Ribosomal Subunit: 23S rRNA mutation C2534U | X-RAY DIFFRACTION | 3.3 | 122 | ||
| 45 | 3G4S|1|9 | Title: Co-crystal structure of Tiamulin bound to the large ribosomal subunit | X-RAY DIFFRACTION | 3.2 | 122 | ||
| 46 | 3OW2|1|9 | Title: Crystal Structure of Enhanced Macrolide Bound to 50S Ribosomal Subunit | X-RAY DIFFRACTION | 2.7 | 122 | ||
| 47 | 3CPW|1|9 | Title: The structure of the antibiotic LINEZOLID bound to the large ribosomal subunit of HALOARCULA MARISMORTUI | X-RAY DIFFRACTION | 2.7 | 122 | ||
| 48 | 1NJI|1|B | Title: Structure of chloramphenicol bound to the 50S ribosomal subunit | X-RAY DIFFRACTION | 3 | 122 | ||
| 49 | 1JJ2|1|9 | Title: Fully Refined Crystal Structure of the Haloarcula marismortui Large Ribosomal Subunit at 2.4 Angstrom Resolution | X-RAY DIFFRACTION | 2.4 | 122 | ||
| 50 | 1K73|1|B | Title: Co-crystal Structure of Anisomycin Bound to the 50S Ribosomal Subunit | X-RAY DIFFRACTION | 3.01 | 122 | ||
| 51 | 1QVF|1|9 | Title: Structure of a deacylated tRNA minihelix bound to the E site of the large ribosomal subunit of Haloarcula marismortui | X-RAY DIFFRACTION | 3.1 | 122 | ||
| 52 | 1KC8|1|B | Title: Co-crystal Structure of Blasticidin S Bound to the 50S Ribosomal Subunit | X-RAY DIFFRACTION | 3.01 | 122 | ||
| 53 | 1Q82|1|B | Title: Crystal Structure of CC-Puromycin bound to the A-site of the 50S ribosomal subunit | X-RAY DIFFRACTION | 2.98 | 122 | ||
| 54 | 1Q86|1|B | Title: Crystal structure of CCA-Phe-cap-biotin bound simultaneously at half occupancy to both the A-site and P-site of the the 50S ribosomal Subunit. | X-RAY DIFFRACTION | 3 | 122 | ||
| 55 | 3CXC|1|9 | Title: The structure of an enhanced oxazolidinone inhibitor bound to the 50S ribosomal subunit of H. marismortui | X-RAY DIFFRACTION | 3 | 122 | ||
| 56 | 1QVG|1|9 | Title: Structure of CCA oligonucleotide bound to the tRNA binding sites of the large ribosomal subunit of Haloarcula marismortui | X-RAY DIFFRACTION | 2.9 | 122 | ||
| 57 | 1Q7Y|1|B | Title: Crystal Structure of CCdAP-Puromycin bound at the Peptidyl transferase center of the 50S ribosomal subunit | X-RAY DIFFRACTION | 3.2 | 122 | ||
| 58 | 1Q81|1|B | Title: Crystal Structure of minihelix with 3' puromycin bound to A-site of the 50S ribosomal subunit. | X-RAY DIFFRACTION | 2.95 | 122 | ||
| 59 | 1W2B|1|9 | Title: Trigger Factor ribosome binding domain in complex with 50S | X-RAY DIFFRACTION | 3.5 | 122 | ||
| 60 | 1M1K|1|B | Title: Co-crystal structure of azithromycin bound to the 50S ribosomal subunit of Haloarcula marismortui | X-RAY DIFFRACTION | 3.2 | 122 | ||
| 61 | 1K9M|1|B | Title: Co-crystal structure of tylosin bound to the 50S ribosomal subunit of Haloarcula marismortui | X-RAY DIFFRACTION | 3 | 122 | ||
| 62 | 1KD1|1|B | Title: Co-crystal Structure of Spiramycin bound to the 50S Ribosomal Subunit of Haloarcula marismortui | X-RAY DIFFRACTION | 3 | 122 | ||
| 63 | 1K8A|1|B | Title: Co-crystal structure of Carbomycin A bound to the 50S ribosomal subunit of Haloarcula marismortui | X-RAY DIFFRACTION | 3 | 122 | ||
| 64 | 1N8R|1|B | Title: Structure of large ribosomal subunit in complex with virginiamycin M | X-RAY DIFFRACTION | 3 | 122 | ||
| 65 | 1KQS|1|9 | Title: The Haloarcula marismortui 50S Complexed with a Pretranslocational Intermediate in Protein Synthesis | X-RAY DIFFRACTION | 3.1 | 122 | ||
| 66 | 1M90|1|B | Title: Co-crystal structure of CCA-Phe-caproic acid-biotin and sparsomycin bound to the 50S ribosomal subunit | X-RAY DIFFRACTION | 2.8 | 122 | ||
| 67 | 4V9F|1|9 | Title: The re-refined crystal structure of the Haloarcula marismortui large ribosomal subunit at 2.4 Angstrom resolution: more complete structure of the L7/L12 and L1 stalk, L5 and LX proteins | X-RAY DIFFRACTION | 2.4 | 122 |
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