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Equivalence class NR_4.0_65214.2 Current

#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. ÅDate
15F9F|1|F (rep)RNA (5'-R(*GP*AP*AP*UP*AP*UP*AP*AP*UP*AP*GP*UP*GP*AP*UP*AP*UP*UP*AP*UP*AP*UP*UP*C)-3')synthetic constructSyntheticCrystal structure of RIG-I helicase-RD in complex with 24-mer blunt-end hairpin RNAX-ray diffraction2.62016-01-13
25F9F|1|LRNA (5'-R(*GP*AP*AP*UP*AP*UP*AP*AP*UP*AP*GP*UP*GP*AP*UP*AP*UP*UP*AP*UP*AP*UP*UP*C)-3')synthetic constructSyntheticCrystal structure of RIG-I helicase-RD in complex with 24-mer blunt-end hairpin RNAX-ray diffraction2.62016-01-13
35F9F|1|HRNA (5'-R(*GP*AP*AP*UP*AP*UP*AP*AP*UP*AP*GP*UP*GP*AP*UP*AP*UP*UP*AP*UP*AP*UP*UP*C)-3')synthetic constructSyntheticCrystal structure of RIG-I helicase-RD in complex with 24-mer blunt-end hairpin RNAX-ray diffraction2.62016-01-13
45F9F|1|BRNA (5'-R(*GP*AP*AP*UP*AP*UP*AP*AP*UP*AP*GP*UP*GP*AP*UP*AP*UP*UP*AP*UP*AP*UP*UP*C)-3')synthetic constructSyntheticCrystal structure of RIG-I helicase-RD in complex with 24-mer blunt-end hairpin RNAX-ray diffraction2.62016-01-13
55F9F|1|JRNA (5'-R(*GP*AP*AP*UP*AP*UP*AP*AP*UP*AP*GP*UP*GP*AP*UP*AP*UP*UP*AP*UP*AP*UP*UP*C)-3')synthetic constructSyntheticCrystal structure of RIG-I helicase-RD in complex with 24-mer blunt-end hairpin RNAX-ray diffraction2.62016-01-13
65F9F|1|DRNA (5'-R(*GP*AP*AP*UP*AP*UP*AP*AP*UP*AP*GP*UP*GP*AP*UP*AP*UP*UP*AP*UP*AP*UP*UP*C)-3')synthetic constructSyntheticCrystal structure of RIG-I helicase-RD in complex with 24-mer blunt-end hairpin RNAX-ray diffraction2.62016-01-13
75F9H|1|FRNA (5'-R(P*AP*AP*UP*AP*UP*AP*AP*UP*AP*GP*UP*GP*AP*UP*AP*UP*UP*AP*UP*AP*UP*UP*C)-3')synthetic constructSyntheticCrystal structure of RIG-I helicase-RD in complex with 24-mer 5' triphosphate hairpin RNAX-ray diffraction3.12016-01-13
85F98|1|DRNA (5'-R(P*GP*AP*AP*UP*AP*UP*AP*AP*UP*AP*GP*UP*GP*AP*UP*AP*UP*UP*AP*UP*AP*UP*UP*C)-3')synthetic constructSyntheticCrystal structure of RIG-I in complex with Cap-0 RNAX-ray diffraction3.282016-01-13
95F98|1|BRNA (5'-R(P*GP*AP*AP*UP*AP*UP*AP*AP*UP*AP*GP*UP*GP*AP*UP*AP*UP*UP*AP*UP*AP*UP*UP*C)-3')synthetic constructSyntheticCrystal structure of RIG-I in complex with Cap-0 RNAX-ray diffraction3.282016-01-13
105F9H|1|LRNA (5'-R(P*AP*AP*UP*AP*UP*AP*AP*UP*AP*GP*UP*GP*AP*UP*AP*UP*UP*AP*UP*AP*UP*UP*C)-3')synthetic constructSyntheticCrystal structure of RIG-I helicase-RD in complex with 24-mer 5' triphosphate hairpin RNAX-ray diffraction3.12016-01-13
115F98|1|LRNA (5'-R(P*GP*AP*AP*UP*AP*UP*AP*AP*UP*AP*GP*UP*GP*AP*UP*AP*UP*UP*AP*UP*AP*UP*UP*C)-3')synthetic constructSyntheticCrystal structure of RIG-I in complex with Cap-0 RNAX-ray diffraction3.282016-01-13
125F98|1|JRNA (5'-R(P*GP*AP*AP*UP*AP*UP*AP*AP*UP*AP*GP*UP*GP*AP*UP*AP*UP*UP*AP*UP*AP*UP*UP*C)-3')synthetic constructSyntheticCrystal structure of RIG-I in complex with Cap-0 RNAX-ray diffraction3.282016-01-13
135F98|1|HRNA (5'-R(P*GP*AP*AP*UP*AP*UP*AP*AP*UP*AP*GP*UP*GP*AP*UP*AP*UP*UP*AP*UP*AP*UP*UP*C)-3')synthetic constructSyntheticCrystal structure of RIG-I in complex with Cap-0 RNAX-ray diffraction3.282016-01-13
145F98|1|FRNA (5'-R(P*GP*AP*AP*UP*AP*UP*AP*AP*UP*AP*GP*UP*GP*AP*UP*AP*UP*UP*AP*UP*AP*UP*UP*C)-3')synthetic constructSyntheticCrystal structure of RIG-I in complex with Cap-0 RNAX-ray diffraction3.282016-01-13
155F9H|1|JRNA (5'-R(P*AP*AP*UP*AP*UP*AP*AP*UP*AP*GP*UP*GP*AP*UP*AP*UP*UP*AP*UP*AP*UP*UP*C)-3')synthetic constructSyntheticCrystal structure of RIG-I helicase-RD in complex with 24-mer 5' triphosphate hairpin RNAX-ray diffraction3.12016-01-13
165F9H|1|DRNA (5'-R(P*AP*AP*UP*AP*UP*AP*AP*UP*AP*GP*UP*GP*AP*UP*AP*UP*UP*AP*UP*AP*UP*UP*C)-3')synthetic constructSyntheticCrystal structure of RIG-I helicase-RD in complex with 24-mer 5' triphosphate hairpin RNAX-ray diffraction3.12016-01-13
175F9H|1|BRNA (5'-R(P*AP*AP*UP*AP*UP*AP*AP*UP*AP*GP*UP*GP*AP*UP*AP*UP*UP*AP*UP*AP*UP*UP*C)-3')synthetic constructSyntheticCrystal structure of RIG-I helicase-RD in complex with 24-mer 5' triphosphate hairpin RNAX-ray diffraction3.12016-01-13
185F9H|1|HRNA (5'-R(P*AP*AP*UP*AP*UP*AP*AP*UP*AP*GP*UP*GP*AP*UP*AP*UP*UP*AP*UP*AP*UP*UP*C)-3')synthetic constructSyntheticCrystal structure of RIG-I helicase-RD in complex with 24-mer 5' triphosphate hairpin RNAX-ray diffraction3.12016-01-13

Release history

Release8.07.09.09.19.29.39.49.59.69.79.89.99.109.119.129.139.149.159.169.179.189.199.209.219.229.239.24
Date2017-04-052017-04-052017-10-262017-11-072017-12-022017-12-132017-12-212017-12-222018-01-042018-01-052018-01-102018-01-112018-01-122018-01-282018-04-012018-04-012018-09-142018-11-092018-11-162018-11-232018-11-302018-12-052018-12-122018-12-192018-12-262019-01-022019-01-09

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent
NR_4.0_65214.2NR_4.0_65214.28.0(18) 5F98|1|B, 5F9H|1|J, 5F9H|1|H, 5F9H|1|F, 5F9H|1|D, 5F9H|1|B, 5F9F|1|L, 5F9F|1|J, 5F9F|1|H, 5F9F|1|F, 5F9F|1|D, 5F9F|1|B, 5F98|1|L, 5F98|1|J, 5F98|1|H, 5F98|1|F, 5F98|1|D, 5F9H|1|L(0) (0)

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLengthNAKB_NA_annotationNAKB_protein_annotation
15F9F|1|HTitle: Crystal structure of RIG-I helicase-RD in complex with 24-mer blunt-end hairpin RNAX-RAY DIFFRACTION2.624
25F9F|1|LTitle: Crystal structure of RIG-I helicase-RD in complex with 24-mer blunt-end hairpin RNAX-RAY DIFFRACTION2.624
35F9F|1|FTitle: Crystal structure of RIG-I helicase-RD in complex with 24-mer blunt-end hairpin RNAX-RAY DIFFRACTION2.624
45F9F|1|BTitle: Crystal structure of RIG-I helicase-RD in complex with 24-mer blunt-end hairpin RNAX-RAY DIFFRACTION2.624
55F9F|1|JTitle: Crystal structure of RIG-I helicase-RD in complex with 24-mer blunt-end hairpin RNAX-RAY DIFFRACTION2.624
65F9F|1|DTitle: Crystal structure of RIG-I helicase-RD in complex with 24-mer blunt-end hairpin RNAX-RAY DIFFRACTION2.624
75F98|1|BTitle: Crystal structure of RIG-I in complex with Cap-0 RNAX-RAY DIFFRACTION3.2824
85F9H|1|HTitle: Crystal structure of RIG-I helicase-RD in complex with 24-mer 5' triphosphate hairpin RNAX-RAY DIFFRACTION3.123
95F9H|1|JTitle: Crystal structure of RIG-I helicase-RD in complex with 24-mer 5' triphosphate hairpin RNAX-RAY DIFFRACTION3.123
105F9H|1|BTitle: Crystal structure of RIG-I helicase-RD in complex with 24-mer 5' triphosphate hairpin RNAX-RAY DIFFRACTION3.123
115F9H|1|FTitle: Crystal structure of RIG-I helicase-RD in complex with 24-mer 5' triphosphate hairpin RNAX-RAY DIFFRACTION3.123
125F9H|1|LTitle: Crystal structure of RIG-I helicase-RD in complex with 24-mer 5' triphosphate hairpin RNAX-RAY DIFFRACTION3.123
135F9H|1|DTitle: Crystal structure of RIG-I helicase-RD in complex with 24-mer 5' triphosphate hairpin RNAX-RAY DIFFRACTION3.123
145F98|1|HTitle: Crystal structure of RIG-I in complex with Cap-0 RNAX-RAY DIFFRACTION3.2824
155F98|1|DTitle: Crystal structure of RIG-I in complex with Cap-0 RNAX-RAY DIFFRACTION3.2824
165F98|1|FTitle: Crystal structure of RIG-I in complex with Cap-0 RNAX-RAY DIFFRACTION3.2824
175F98|1|LTitle: Crystal structure of RIG-I in complex with Cap-0 RNAX-RAY DIFFRACTION3.2824
185F98|1|JTitle: Crystal structure of RIG-I in complex with Cap-0 RNAX-RAY DIFFRACTION3.2824

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