#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. ÅDate
15J91|1|DA (rep)Large subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Structure of the Wild-type 70S E coli ribosome bound to TigecyclineX-ray diffraction2.962016-07-06
24V54|1|DBLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the bacterial ribosome from Escherichia coli in complex with ribosome recycling factor (RRF).X-ray diffraction3.32014-07-09
34V54|1|BBLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the bacterial ribosome from Escherichia coli in complex with ribosome recycling factor (RRF).X-ray diffraction3.32014-07-09
45J8A|1|DALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Structure of the E coli 70S ribosome with the U1052G mutation in 16S rRNA bound to tigecyclineX-ray diffraction3.12016-07-06
54WWW|1|RALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli ribosome bound to CEM-101X-ray diffraction3.12014-12-24
64V7T|1|BALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli ribosome bound to chloramphenicol.X-ray diffraction3.192014-07-09
75J88|1|DALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Structure of the E coli 70S ribosome with the U1060A mutation in 16S rRNAX-ray diffraction3.322016-07-06
84V6C|1|BALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli 70S ribosome in an intermediate state of ratchetingX-ray diffraction3.192014-07-09
94V52|1|DBLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the bacterial ribosome from Escherichia coli in complex with neomycin.X-ray diffraction3.212014-07-09
105JC9|1|DALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Structure of the Escherichia coli ribosome with the U1052G mutation in the 16S rRNAX-ray diffraction3.032016-07-06
114YBB|1|DALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541High-resolution structure of the Escherichia coli ribosomeX-ray diffraction2.12015-03-18
124V7S|1|BALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli ribosome bound to telithromycin.X-ray diffraction3.252014-07-09
134V52|1|BBLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the bacterial ribosome from Escherichia coli in complex with neomycin.X-ray diffraction3.212014-07-09
144V4Q|1|DBLarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Crystal structure of the bacterial ribosome from Escherichia coli at 3.5 A resolution.X-ray diffraction3.462014-07-09
154V7U|1|BALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli ribosome bound to erythromycin.X-ray diffraction3.12014-07-09
165J91|1|CALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Structure of the Wild-type 70S E coli ribosome bound to TigecyclineX-ray diffraction2.962016-07-06
174V4Q|1|BBLarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Crystal structure of the bacterial ribosome from Escherichia coli at 3.5 A resolution.X-ray diffraction3.462014-07-09
184V50|1|DBLarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Crystal Structure of Ribosome with messenger RNA and the Anticodon stem-loop of P-site tRNA.X-ray diffraction3.222014-07-09
194V53|1|DBLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin.X-ray diffraction3.542014-07-09
205GAE|1|ALarge subunit ribosomal RNA23S rRNA, tRNA CCA end (5'-R(P*CP*CP*A)-3')Escherichia coliBacteriaRF02541RNC in complex with a translocating SecYEGElectron microscopy3.332016-01-27
214V9P|1|EALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Control of ribosomal subunit rotation by elongation factor GX-ray diffraction2.92014-07-09
224V50|1|BBLarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Crystal Structure of Ribosome with messenger RNA and the Anticodon stem-loop of P-site tRNA.X-ray diffraction3.222014-07-09
234V85|1|BALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal Structure of Release Factor RF3 Trapped in the GTP State on a Rotated Conformation of the Ribosome.X-ray diffraction3.22014-07-09
244V53|1|BBLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin.X-ray diffraction3.542014-07-09
254V4H|1|DBLarge subunit ribosomal RNA23S RIBOSOMAL RNAEscherichia coliBacteriaRF02541Crystal structure of the bacterial ribosome from Escherichia coli in complex with the antibiotic kasugamyin at 3.5A resolution.X-ray diffraction3.462014-07-09
265J8A|1|CALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Structure of the E coli 70S ribosome with the U1052G mutation in 16S rRNA bound to tigecyclineX-ray diffraction3.12016-07-06
274V9O|1|EALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Control of ribosomal subunit rotation by elongation factor GX-ray diffraction2.92014-07-09
284V4H|1|BBLarge subunit ribosomal RNA23S RIBOSOMAL RNAEscherichia coliBacteriaRF02541Crystal structure of the bacterial ribosome from Escherichia coli in complex with the antibiotic kasugamyin at 3.5A resolution.X-ray diffraction3.462014-07-09
294V55|1|DBLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin and ribosome recycling factor (RRF).X-ray diffraction42014-07-09
304V57|1|BBLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin and neomycin.X-ray diffraction3.52014-07-09
314V7V|1|BALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli ribosome bound to clindamycin.X-ray diffraction3.292014-07-09
325GAG|1|ALarge subunit ribosomal RNA23S rRNA, tRNA CCAendEscherichia coliBacteriaRF02541RNC in complex with SRP-SR in the closed stateElectron microscopy3.82016-01-27
334V64|1|BBLarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Crystal structure of the bacterial ribosome from Escherichia coli in complex with hygromycin B.X-ray diffraction3.52014-07-09
344V57|1|DBLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin and neomycin.X-ray diffraction3.52014-07-09
354V64|1|DBLarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Crystal structure of the bacterial ribosome from Escherichia coli in complex with hygromycin B.X-ray diffraction3.52014-07-09
364V55|1|BBLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin and ribosome recycling factor (RRF).X-ray diffraction42014-07-09
375JC9|1|CALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Structure of the Escherichia coli ribosome with the U1052G mutation in the 16S rRNAX-ray diffraction3.032016-07-06
384V89|1|BALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal Structure of Release Factor RF3 Trapped in the GTP State on a Rotated Conformation of the Ribosome (without viomycin)X-ray diffraction3.72014-07-09
394V6D|1|BALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli 70S ribosome in an intermediate state of ratchetingX-ray diffraction3.812014-07-09
404V9D|1|CALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Structures of the bacterial ribosome in classical and hybrid states of tRNA bindingX-ray diffraction32014-07-09
415GAD|1|ALarge subunit ribosomal RNA23S rRNA, tRNA CCAendEscherichia coliBacteriaRF02541RNC-SRP-SR complex early stateElectron microscopy3.72016-01-27
425GAH|1|ALarge subunit ribosomal RNA23S rRNA, tRNA CCAendEscherichia coliBacteriaRF02541RNC in complex with SRP with detached NG domainElectron microscopy3.82016-01-27
434U27|1|BALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli ribosome bound to flopristin and linopristin.X-ray diffraction2.82014-07-30
444U25|1|BALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli ribosome bound to virginiamycin M1.X-ray diffraction2.92014-07-30
455IQR|1|1Large subunit ribosomal RNALSU rRNAEscherichia coliBacteriaRF02541Structure of RelA bound to the 70S ribosomeElectron microscopy32016-05-04
464U24|1|BALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli ribosome bound to dalfopristin.X-ray diffraction2.92014-07-30
474V6E|1|BALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli 70S ribosome in an intermediate state of ratchetingX-ray diffraction3.712014-07-09
484V9P|1|CALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Control of ribosomal subunit rotation by elongation factor GX-ray diffraction2.92014-07-09
494V9P|1|AALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Control of ribosomal subunit rotation by elongation factor GX-ray diffraction2.92014-07-09
504V9O|1|AALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Control of ribosomal subunit rotation by elongation factor GX-ray diffraction2.92014-07-09
514WF1|1|BALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli ribosome bound to negamycin.X-ray diffraction3.092014-11-05
524U1U|1|BALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli ribosome bound to quinupristin.X-ray diffraction2.952014-07-30
533J7Z|1|ALarge subunit ribosomal RNA23S rRNA, P-tRNA CCA-endEscherichia coliBacteriaRF02541Structure of the E. coli 50S subunit with ErmCL nascent chainElectron microscopy3.92014-10-22
544V9O|1|CALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Control of ribosomal subunit rotation by elongation factor GX-ray diffraction2.92014-07-09
554V56|1|DBLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin.X-ray diffraction3.932014-07-09
564UY8|1|ALarge subunit ribosomal RNARRNA-23S RIBOSOMAL RNAEscherichia coliBacteriaRF02541Molecular basis for the ribosome functioning as a L-tryptophan sensor - Cryo-EM structure of a TnaC stalled E.coli ribosomeElectron microscopy3.82014-10-29
574U1V|1|BALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli ribosome bound to linopristin.X-ray diffraction32014-07-30
584V56|1|BBLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin.X-ray diffraction3.932014-07-09
594V9P|1|GALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Control of ribosomal subunit rotation by elongation factor GX-ray diffraction2.92014-07-09
604U20|1|BALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli ribosome bound to flopristin.X-ray diffraction2.92014-07-30
614U26|1|BALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli ribosome bound to dalfopristin and quinupristin.X-ray diffraction2.82014-07-30
624YBB|1|CALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541High-resolution structure of the Escherichia coli ribosomeX-ray diffraction2.12015-03-18
634WOI|1|BALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF025414,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2X-ray diffraction32015-08-05
645J88|1|CALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Structure of the E coli 70S ribosome with the U1060A mutation in 16S rRNAX-ray diffraction3.322016-07-06
653J9Y|1|ALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Cryo-EM structure of tetracycline resistance protein TetM bound to a translating E.coli ribosomeElectron microscopy3.92015-04-15
665AFI|1|ALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF025412.9A Structure of E. coli ribosome-EF-TU complex by cs-corrected cryo-EMElectron microscopy2.92015-03-11
674V9D|1|DALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Structures of the bacterial ribosome in classical and hybrid states of tRNA bindingX-ray diffraction32014-07-09
684U1U|1|DALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli ribosome bound to quinupristin.X-ray diffraction2.952014-07-30
694V6D|1|DALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli 70S ribosome in an intermediate state of ratchetingX-ray diffraction3.812014-07-09
705JTE|1|BALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Cryo-EM structure of an ErmBL-stalled ribosome in complex with A-, P-, and E-tRNAElectron microscopy3.62016-07-20
714WOI|1|CALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF025414,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2X-ray diffraction32015-08-05
724U20|1|DALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli ribosome bound to flopristin.X-ray diffraction2.92014-07-30
735JU8|1|BALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Cryo-EM structure of an ErmBL-stalled ribosome in complex with P-, and E-tRNAElectron microscopy3.62016-07-20
744V6C|1|DALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli 70S ribosome in an intermediate state of ratchetingX-ray diffraction3.192014-07-09
754V9C|1|DALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Allosteric control of the ribosome by small-molecule antibioticsX-ray diffraction3.32014-07-09
764U1V|1|DALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli ribosome bound to linopristin.X-ray diffraction32014-07-30
774U25|1|DALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli ribosome bound to virginiamycin M1.X-ray diffraction2.92014-07-30
784V6E|1|DALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli 70S ribosome in an intermediate state of ratchetingX-ray diffraction3.712014-07-09
794V9O|1|GALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Control of ribosomal subunit rotation by elongation factor GX-ray diffraction2.92014-07-09
804U27|1|DALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli ribosome bound to flopristin and linopristin.X-ray diffraction2.82014-07-30
814V7S|1|DALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli ribosome bound to telithromycin.X-ray diffraction3.252014-07-09
824V7T|1|DALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli ribosome bound to chloramphenicol.X-ray diffraction3.192014-07-09
834V7V|1|DALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli ribosome bound to clindamycin.X-ray diffraction3.292014-07-09
843JCE|1|ALarge subunit ribosomal RNA23 ribosomal RNAEscherichia coliBacteriaRF02541Structure of Escherichia coli EF4 in pretranslocational ribosomes (Pre EF4)Electron microscopy3.22016-01-13
854WF1|1|DALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli ribosome bound to negamycin.X-ray diffraction3.092014-11-05
863J9Z|1|LALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Activation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor GElectron microscopy3.62015-07-01
873JCJ|1|ALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Structures of ribosome-bound initiation factor 2 reveal the mechanism of subunit associationElectron microscopy3.72016-03-09
884WWW|1|YALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli ribosome bound to CEM-101X-ray diffraction3.12014-12-24
894U24|1|DALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli ribosome bound to dalfopristin.X-ray diffraction2.92014-07-30
904U26|1|DALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli ribosome bound to dalfopristin and quinupristin.X-ray diffraction2.82014-07-30
914V9C|1|BALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Allosteric control of the ribosome by small-molecule antibioticsX-ray diffraction3.32014-07-09
925L3P|1|ALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Cryo-EM structure of stringent response factor RelA bound to ErmCL-stalled ribosome complexElectron microscopy3.72016-07-20
933JBV|1|bLarge subunit ribosomal RNARNA (2903-MER)Escherichia coliBacteriaRF02541Mechanisms of Ribosome Stalling by SecM at Multiple Elongation StepsElectron microscopy3.322016-01-27
944V7U|1|DALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli ribosome bound to erythromycin.X-ray diffraction3.12014-07-09
953JA1|1|LALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Activation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor GElectron microscopy3.62015-07-01
963JCD|1|ALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Structure of Escherichia coli EF4 in posttranslocational ribosomes (Post EF4)Electron microscopy3.72016-01-13
973JBU|1|bLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Mechanisms of Ribosome Stalling by SecM at Multiple Elongation StepsElectron microscopy3.642016-01-27
984V5B|1|ABLarge subunit ribosomal RNA23S RIBOSOMAL RNAEscherichia coliBacteriaRF02541Structure of PDF binding helix in complex with the ribosomeX-ray diffraction3.742014-07-09
994V5B|1|CBLarge subunit ribosomal RNA23S RIBOSOMAL RNAEscherichia coliBacteriaRF02541Structure of PDF binding helix in complex with the ribosomeX-ray diffraction3.742014-07-09

Release history

Release3.04.05.0
Date2016-07-252016-07-252016-07-25

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent
NR_4.0_62116.2NR_all_62116.13.0(68) 3J7Z|1|A, 4U1U|1|BA, 4U25|1|BA, 4U24|1|DA, 4U24|1|BA, 4U20|1|DA, 4U20|1|BA, 4U1V|1|DA, 4U1V|1|BA, 4U1U|1|DA, 4V9D|1|DA, 4V9O|1|AA, 4WF1|1|DA, 4WF1|1|BA, 4V9P|1|GA, 4V9P|1|EA, 4V9P|1|CA, 4V9P|1|AA, 4V9O|1|GA, 4V9O|1|EA, 4V9O|1|CA, 4V7U|1|BA, 4V7T|1|DA, 4V9D|1|CA, 4V9C|1|DA, 4V9C|1|BA, 4V89|1|BA, 4V85|1|BA, 4V7V|1|DA, 4V7V|1|BA, 4V7U|1|DA, 4V6C|1|BA, 4V6C|1|DA, 4V7T|1|BA, 4V7S|1|DA, 4V7S|1|BA, 4V6E|1|DA, 4V6E|1|BA, 4V6D|1|DA, 4V6D|1|BA, 4V55|1|DB, 4V55|1|BB, 4V64|1|DB, 4V64|1|BB, 4V5B|1|CB, 4V5B|1|AB, 4V57|1|DB, 4V57|1|BB, 4V56|1|DB, 4V56|1|BB, 4V4Q|1|DB, 4V50|1|BB, 4V54|1|DB, 4V54|1|BB, 4V53|1|DB, 4V53|1|BB, 4V52|1|DB, 4V52|1|BB, 4V50|1|DB, 4U25|1|DA, 4V4Q|1|BB, 4V4H|1|DB, 4V4H|1|BB, 4UY8|1|A, 4U27|1|DA, 4U27|1|BA, 4U26|1|DA, 4U26|1|BA(31) 5JC9|1|DA, 5JTE|1|BA, 5JC9|1|CA, 5L3P|1|A, 3J9Y|1|A, 5JU8|1|BA, 5J8A|1|CA, 5J8A|1|DA, 5J88|1|DA, 5J91|1|DA, 5J91|1|CA, 3JCJ|1|A, 4WOI|1|BA, 3JCD|1|A, 3JCE|1|A, 4WOI|1|CA, 4WWW|1|RA, 4WWW|1|YA, 3J9Z|1|LA, 3JA1|1|LA, 3JBU|1|b, 3JBV|1|b, 5GAG|1|A, 5GAH|1|A, 5GAD|1|A, 5GAE|1|A, 5IQR|1|1, 5J88|1|CA, 4YBB|1|CA, 4YBB|1|DA, 5AFI|1|A(49) 4V6Z|1|BA, 2J28|1|B, 2RDO|1|B, 3BBX|1|B, 3DG0|1|B, 3DG2|1|B, 3DG4|1|B, 3DG5|1|B, 3J5L|1|A, 3J8G|1|B, 4CSU|1|B, 4V47|1|A0, 4V48|1|A0, 4V4V|1|B0, 4V4W|1|B0, 1C2W|1|B, 4V7I|1|A8, 4V70|1|BA, 4V71|1|BA, 4V72|1|BA, 4V73|1|BA, 4V74|1|BA, 4V75|1|BA, 4V76|1|BA, 4V77|1|BA, 4V78|1|BA, 4V79|1|BA, 4V7A|1|BA, 4V7B|1|BA, 4V7C|1|BA, 4V7D|1|AA, 4V5H|1|BB, 4V5Y|1|BB, 4V6Y|1|BA, 4V6V|1|BA, 4V5Y|1|DB, 4V65|1|BB, 4V66|1|BB, 4V69|1|BB, 4V6K|1|AB, 4V6L|1|BB, 4V6M|1|B8, 4V6N|1|AB, 4V6O|1|BB, 4V6P|1|BB, 4V6Q|1|BB, 4V6R|1|BB, 4V6S|1|AB, 4V6T|1|BA

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLengthNAKB_NA_annotationNAKB_protein_annotation
13JBU|1|bTitle: Mechanisms of Ribosome Stalling by SecM at Multiple Elongation StepsELECTRON MICROSCOPY3.642903
25L3P|1|ATitle: Cryo-EM structure of stringent response factor RelA bound to ErmCL-stalled ribosome complexELECTRON MICROSCOPY3.72866
35GAH|1|ATitle: RNC in complex with SRP with detached NG domainELECTRON MICROSCOPY3.82883
45GAD|1|ATitle: RNC-SRP-SR complex early stateELECTRON MICROSCOPY3.72883
55GAG|1|ATitle: RNC in complex with SRP-SR in the closed stateELECTRON MICROSCOPY3.82883
65GAE|1|ATitle: RNC in complex with a translocating SecYEGELECTRON MICROSCOPY3.332884
73JCE|1|ATitle: Structure of Escherichia coli EF4 in pretranslocational ribosomes (Pre EF4)ELECTRON MICROSCOPY3.22903
83JCD|1|ATitle: Structure of Escherichia coli EF4 in posttranslocational ribosomes (Post EF4)ELECTRON MICROSCOPY3.72903
93J9Z|1|LATitle: Activation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor GELECTRON MICROSCOPY3.62904
103J9Y|1|ATitle: Cryo-EM structure of tetracycline resistance protein TetM bound to a translating E.coli ribosomeELECTRON MICROSCOPY3.92876
115AFI|1|ATitle: 2.9A Structure of E. coli ribosome-EF-TU complex by cs-corrected cryo-EMELECTRON MICROSCOPY2.92876
125IQR|1|1Title: Structure of RelA bound to the 70S ribosomeELECTRON MICROSCOPY32882
135JTE|1|BATitle: Cryo-EM structure of an ErmBL-stalled ribosome in complex with A-, P-, and E-tRNAELECTRON MICROSCOPY3.62897
145JU8|1|BATitle: Cryo-EM structure of an ErmBL-stalled ribosome in complex with P-, and E-tRNAELECTRON MICROSCOPY3.62897
154V5B|1|ABTitle: Structure of PDF binding helix in complex with the ribosomeX-RAY DIFFRACTION3.742841
164V54|1|BBTitle: Crystal structure of the bacterial ribosome from Escherichia coli in complex with ribosome recycling factor (RRF).X-RAY DIFFRACTION3.32841
174V4Q|1|BBTitle: Crystal structure of the bacterial ribosome from Escherichia coli at 3.5 A resolution.X-RAY DIFFRACTION3.462841
184V4H|1|BBTitle: Crystal structure of the bacterial ribosome from Escherichia coli in complex with the antibiotic kasugamyin at 3.5A resolution.X-RAY DIFFRACTION3.462841
194V52|1|BBTitle: Crystal structure of the bacterial ribosome from Escherichia coli in complex with neomycin.X-RAY DIFFRACTION3.212841
204V53|1|BBTitle: Crystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin.X-RAY DIFFRACTION3.542841
214V55|1|BBTitle: Crystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin and ribosome recycling factor (RRF).X-RAY DIFFRACTION42841
224V64|1|BBTitle: Crystal structure of the bacterial ribosome from Escherichia coli in complex with hygromycin B.X-RAY DIFFRACTION3.52841
234V57|1|BBTitle: Crystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin and neomycin.X-RAY DIFFRACTION3.52841
244V56|1|BBTitle: Crystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin.X-RAY DIFFRACTION3.932841
254V50|1|BBTitle: Crystal Structure of Ribosome with messenger RNA and the Anticodon stem-loop of P-site tRNA.X-RAY DIFFRACTION3.222841
264V6D|1|DATitle: Crystal structure of the E. coli 70S ribosome in an intermediate state of ratchetingX-RAY DIFFRACTION3.812841
274V6E|1|DATitle: Crystal structure of the E. coli 70S ribosome in an intermediate state of ratchetingX-RAY DIFFRACTION3.712841
284WWW|1|YATitle: Crystal structure of the E. coli ribosome bound to CEM-101X-RAY DIFFRACTION3.12841
294V7S|1|DATitle: Crystal structure of the E. coli ribosome bound to telithromycin.X-RAY DIFFRACTION3.252841
304V7V|1|DATitle: Crystal structure of the E. coli ribosome bound to clindamycin.X-RAY DIFFRACTION3.292841
314V7T|1|DATitle: Crystal structure of the E. coli ribosome bound to chloramphenicol.X-RAY DIFFRACTION3.192841
324V6C|1|DATitle: Crystal structure of the E. coli 70S ribosome in an intermediate state of ratchetingX-RAY DIFFRACTION3.192841
334V7U|1|DATitle: Crystal structure of the E. coli ribosome bound to erythromycin.X-RAY DIFFRACTION3.12841
344WOI|1|CATitle: 4,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2X-RAY DIFFRACTION32897
354V9C|1|BATitle: Allosteric control of the ribosome by small-molecule antibioticsX-RAY DIFFRACTION3.32897
364V9D|1|DATitle: Structures of the bacterial ribosome in classical and hybrid states of tRNA bindingX-RAY DIFFRACTION32896
374U1U|1|DATitle: Crystal structure of the E. coli ribosome bound to quinupristin.X-RAY DIFFRACTION2.952897
384U20|1|DATitle: Crystal structure of the E. coli ribosome bound to flopristin.X-RAY DIFFRACTION2.92897
394U1V|1|DATitle: Crystal structure of the E. coli ribosome bound to linopristin.X-RAY DIFFRACTION32897
404WF1|1|DATitle: Crystal structure of the E. coli ribosome bound to negamycin.X-RAY DIFFRACTION3.092897
414U27|1|DATitle: Crystal structure of the E. coli ribosome bound to flopristin and linopristin.X-RAY DIFFRACTION2.82897
424U25|1|DATitle: Crystal structure of the E. coli ribosome bound to virginiamycin M1.X-RAY DIFFRACTION2.92897
434U26|1|DATitle: Crystal structure of the E. coli ribosome bound to dalfopristin and quinupristin.X-RAY DIFFRACTION2.82897
444U24|1|DATitle: Crystal structure of the E. coli ribosome bound to dalfopristin.X-RAY DIFFRACTION2.92897
454YBB|1|CATitle: High-resolution structure of the Escherichia coli ribosomeX-RAY DIFFRACTION2.12876
465J91|1|CATitle: Structure of the Wild-type 70S E coli ribosome bound to TigecyclineX-RAY DIFFRACTION2.962876
475J8A|1|CATitle: Structure of the E coli 70S ribosome with the U1052G mutation in 16S rRNA bound to tigecyclineX-RAY DIFFRACTION3.12876
485JC9|1|CATitle: Structure of the Escherichia coli ribosome with the U1052G mutation in the 16S rRNAX-RAY DIFFRACTION3.032876
495J88|1|CATitle: Structure of the E coli 70S ribosome with the U1060A mutation in 16S rRNAX-RAY DIFFRACTION3.322876
504V5B|1|CBTitle: Structure of PDF binding helix in complex with the ribosomeX-RAY DIFFRACTION3.742841
514V4Q|1|DBTitle: Crystal structure of the bacterial ribosome from Escherichia coli at 3.5 A resolution.X-RAY DIFFRACTION3.462841
524V4H|1|DBTitle: Crystal structure of the bacterial ribosome from Escherichia coli in complex with the antibiotic kasugamyin at 3.5A resolution.X-RAY DIFFRACTION3.462841
534V64|1|DBTitle: Crystal structure of the bacterial ribosome from Escherichia coli in complex with hygromycin B.X-RAY DIFFRACTION3.52841
544V54|1|DBTitle: Crystal structure of the bacterial ribosome from Escherichia coli in complex with ribosome recycling factor (RRF).X-RAY DIFFRACTION3.32841
554V55|1|DBTitle: Crystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin and ribosome recycling factor (RRF).X-RAY DIFFRACTION42841
564V53|1|DBTitle: Crystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin.X-RAY DIFFRACTION3.542841
574V52|1|DBTitle: Crystal structure of the bacterial ribosome from Escherichia coli in complex with neomycin.X-RAY DIFFRACTION3.212841
584V57|1|DBTitle: Crystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin and neomycin.X-RAY DIFFRACTION3.52841
594V56|1|DBTitle: Crystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin.X-RAY DIFFRACTION3.932841
604V50|1|DBTitle: Crystal Structure of Ribosome with messenger RNA and the Anticodon stem-loop of P-site tRNA.X-RAY DIFFRACTION3.222841
615J88|1|DATitle: Structure of the E coli 70S ribosome with the U1060A mutation in 16S rRNAX-RAY DIFFRACTION3.322886
625JC9|1|DATitle: Structure of the Escherichia coli ribosome with the U1052G mutation in the 16S rRNAX-RAY DIFFRACTION3.032886
635J8A|1|DATitle: Structure of the E coli 70S ribosome with the U1052G mutation in 16S rRNA bound to tigecyclineX-RAY DIFFRACTION3.12886
645J91|1|DATitle: Structure of the Wild-type 70S E coli ribosome bound to TigecyclineX-RAY DIFFRACTION2.962886
654YBB|1|DATitle: High-resolution structure of the Escherichia coli ribosomeX-RAY DIFFRACTION2.12883
664V6E|1|BATitle: Crystal structure of the E. coli 70S ribosome in an intermediate state of ratchetingX-RAY DIFFRACTION3.712854
674V6D|1|BATitle: Crystal structure of the E. coli 70S ribosome in an intermediate state of ratchetingX-RAY DIFFRACTION3.812854
684V7V|1|BATitle: Crystal structure of the E. coli ribosome bound to clindamycin.X-RAY DIFFRACTION3.292854
694V7S|1|BATitle: Crystal structure of the E. coli ribosome bound to telithromycin.X-RAY DIFFRACTION3.252854
704WWW|1|RATitle: Crystal structure of the E. coli ribosome bound to CEM-101X-RAY DIFFRACTION3.12854
714V6C|1|BATitle: Crystal structure of the E. coli 70S ribosome in an intermediate state of ratchetingX-RAY DIFFRACTION3.192854
724V7T|1|BATitle: Crystal structure of the E. coli ribosome bound to chloramphenicol.X-RAY DIFFRACTION3.192854
734V7U|1|BATitle: Crystal structure of the E. coli ribosome bound to erythromycin.X-RAY DIFFRACTION3.12854
744V9P|1|EATitle: Control of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.92854
754V9O|1|EATitle: Control of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.92854
764V9O|1|GATitle: Control of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.92854
774V9P|1|GATitle: Control of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.92854
783J7Z|1|ATitle: Structure of the E. coli 50S subunit with ErmCL nascent chainELECTRON MICROSCOPY3.92854
794UY8|1|ATitle: Molecular basis for the ribosome functioning as a L-tryptophan sensor - Cryo-EM structure of a TnaC stalled E.coli ribosomeELECTRON MICROSCOPY3.82854
804V9O|1|AATitle: Control of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.92854
814V9P|1|AATitle: Control of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.92854
824V9P|1|CATitle: Control of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.92854
834V9O|1|CATitle: Control of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.92854
843JCJ|1|ATitle: Structures of ribosome-bound initiation factor 2 reveal the mechanism of subunit associationELECTRON MICROSCOPY3.72854
854V89|1|BATitle: Crystal Structure of Release Factor RF3 Trapped in the GTP State on a Rotated Conformation of the Ribosome (without viomycin)X-RAY DIFFRACTION3.72853
864V85|1|BATitle: Crystal Structure of Release Factor RF3 Trapped in the GTP State on a Rotated Conformation of the Ribosome.X-RAY DIFFRACTION3.22853
874U24|1|BATitle: Crystal structure of the E. coli ribosome bound to dalfopristin.X-RAY DIFFRACTION2.92897
884U26|1|BATitle: Crystal structure of the E. coli ribosome bound to dalfopristin and quinupristin.X-RAY DIFFRACTION2.82897
894U25|1|BATitle: Crystal structure of the E. coli ribosome bound to virginiamycin M1.X-RAY DIFFRACTION2.92897
904U27|1|BATitle: Crystal structure of the E. coli ribosome bound to flopristin and linopristin.X-RAY DIFFRACTION2.82897
914WF1|1|BATitle: Crystal structure of the E. coli ribosome bound to negamycin.X-RAY DIFFRACTION3.092897
924U1V|1|BATitle: Crystal structure of the E. coli ribosome bound to linopristin.X-RAY DIFFRACTION32897
934U20|1|BATitle: Crystal structure of the E. coli ribosome bound to flopristin.X-RAY DIFFRACTION2.92897
944U1U|1|BATitle: Crystal structure of the E. coli ribosome bound to quinupristin.X-RAY DIFFRACTION2.952897
954V9D|1|CATitle: Structures of the bacterial ribosome in classical and hybrid states of tRNA bindingX-RAY DIFFRACTION32897
964V9C|1|DATitle: Allosteric control of the ribosome by small-molecule antibioticsX-RAY DIFFRACTION3.32897
974WOI|1|BATitle: 4,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2X-RAY DIFFRACTION32897
983JA1|1|LATitle: Activation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor GELECTRON MICROSCOPY3.62904
993JBV|1|bTitle: Mechanisms of Ribosome Stalling by SecM at Multiple Elongation StepsELECTRON MICROSCOPY3.322903

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