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Equivalence class NR_4.0_54582.4 Obsolete

#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. ÅDate
16BK8|1|2+ 6BK8|1|6+ 6BK8|1|i (rep)U2 splicesomal small nuclear RNA + U6 spliceosomal RNAU2 snRNA, U6 snRNA, RNA (59-MER)Saccharomyces cerevisiaeEukaryaRF00004 + RF00026S. cerevisiae spliceosomal post-catalytic P complexElectron microscopy3.32018-02-21
26EXN|1|2+ 6EXN|1|6U2 splicesomal small nuclear RNA + U6 spliceosomal RNAU2 snRNA, U6 snRNA, Intron lariat: UBC4 RNASaccharomyces cerevisiaeEukaryaRF00004 + RF00026Post-catalytic P complex spliceosome with 3' splice site dockedElectron microscopy3.72018-01-17
35ZWM|1|H+ 5ZWM|1|I+ 5ZWM|1|FU2 splicesomal small nuclear RNA + U4 spliceosomal RNA + U6 spliceosomal RNAU2 snRNA, U4 snRNA, U6 snRNA, Pre-mRNA-BPSSaccharomyces cerevisiaeEukaryaRF00004 + RF00015 + RF00026Cryo-EM structure of the yeast pre-B complex at an average resolution of 3.4~4.6 angstrom (tri-snRNP and U2 snRNP Part)Electron microscopy3.42018-08-29
45LJ3|1|Z+ 5LJ3|1|VU2 splicesomal small nuclear RNA + U6 spliceosomal RNAU2 snRNA (small nuclear RNA), U6 snRNA (small nuclear RNA), Intron of UBC4 pre-mRNASaccharomyces cerevisiaeEukaryaRF00004 + RF00026Structure of the core of the yeast spliceosome immediately after branchingElectron microscopy3.82016-08-03
55ZWO|1|H+ 5ZWO|1|I+ 5ZWO|1|FU2 splicesomal small nuclear RNA + U4 spliceosomal RNA + U6 spliceosomal RNAU2 snRNA, U4 snRNA, U6 snRNA, Pre-mRNASaccharomyces cerevisiaeEukaryaRF00004 + RF00015 + RF00026Cryo-EM structure of the yeast B complex at average resolution of 3.9 angstromElectron microscopy3.92018-08-29

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLengthNAKB_NA_annotationNAKB_protein_annotation
15ZWO|1|H+5ZWO|1|I+5ZWO|1|FTitle: Cryo-EM structure of the yeast B complex at average resolution of 3.9 angstromELECTRON MICROSCOPY3.9150
25ZWM|1|H+5ZWM|1|I+5ZWM|1|FTitle: Cryo-EM structure of the yeast pre-B complex at an average resolution of 3.4~4.6 angstrom (tri-snRNP and U2 snRNP Part)ELECTRON MICROSCOPY3.4206
35LJ3|1|Z+5LJ3|1|VTitle: Structure of the core of the yeast spliceosome immediately after branchingELECTRON MICROSCOPY3.8171
46BK8|1|2+6BK8|1|6+6BK8|1|iTitle: S. cerevisiae spliceosomal post-catalytic P complexELECTRON MICROSCOPY3.3135
56EXN|1|2+6EXN|1|6Title: Post-catalytic P complex spliceosome with 3' splice site dockedELECTRON MICROSCOPY3.7136

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