NR_4.0_47864.1

Members (93)
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#	IFE	Standardized name	Molecule	Organism	Source	Rfam	Title	Method	Res. Å	Date
1	4V4Q\|1\|CA (rep)	Small subunit ribosomal RNA	16S ribosomal RNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the bacterial ribosome from Escherichia coli at 3.5 A resolution.	X-ray diffraction	3.46	2014-07-09
2	4V4H\|1\|CA	Small subunit ribosomal RNA	16S RIBOSOMAL RNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the bacterial ribosome from Escherichia coli in complex with the antibiotic kasugamyin at 3.5A resolution.	X-ray diffraction	3.46	2014-07-09
3	4V52\|1\|CA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the bacterial ribosome from Escherichia coli in complex with neomycin.	X-ray diffraction	3.21	2014-07-09
4	4V52\|1\|AA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the bacterial ribosome from Escherichia coli in complex with neomycin.	X-ray diffraction	3.21	2014-07-09
5	4V54\|1\|CA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the bacterial ribosome from Escherichia coli in complex with ribosome recycling factor (RRF).	X-ray diffraction	3.3	2014-07-09
6	4V4Q\|1\|AA	Small subunit ribosomal RNA	16S ribosomal RNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the bacterial ribosome from Escherichia coli at 3.5 A resolution.	X-ray diffraction	3.46	2014-07-09
7	4V64\|1\|CA	Small subunit ribosomal RNA	16S ribosomal RNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the bacterial ribosome from Escherichia coli in complex with hygromycin B.	X-ray diffraction	3.5	2014-07-09
8	4V6C\|1\|AA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the E. coli 70S ribosome in an intermediate state of ratcheting	X-ray diffraction	3.19	2014-07-09
9	4V54\|1\|AA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the bacterial ribosome from Escherichia coli in complex with ribosome recycling factor (RRF).	X-ray diffraction	3.3	2014-07-09
10	5J8A\|1\|AA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Structure of the E coli 70S ribosome with the U1052G mutation in 16S rRNA bound to tigecycline	X-ray diffraction	3.1	2016-07-06
11	4V64\|1\|AA	Small subunit ribosomal RNA	16S ribosomal RNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the bacterial ribosome from Escherichia coli in complex with hygromycin B.	X-ray diffraction	3.5	2014-07-09
12	4V53\|1\|CA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin.	X-ray diffraction	3.54	2014-07-09
13	5J91\|1\|BA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Structure of the Wild-type 70S E coli ribosome bound to Tigecycline	X-ray diffraction	2.96	2016-07-06
14	5J91\|1\|AA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Structure of the Wild-type 70S E coli ribosome bound to Tigecycline	X-ray diffraction	2.96	2016-07-06
15	4V4H\|1\|AA	Small subunit ribosomal RNA	16S RIBOSOMAL RNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the bacterial ribosome from Escherichia coli in complex with the antibiotic kasugamyin at 3.5A resolution.	X-ray diffraction	3.46	2014-07-09
16	4V53\|1\|AA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin.	X-ray diffraction	3.54	2014-07-09
17	4V7V\|1\|AA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the E. coli ribosome bound to clindamycin.	X-ray diffraction	3.29	2014-07-09
18	5J8A\|1\|BA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Structure of the E coli 70S ribosome with the U1052G mutation in 16S rRNA bound to tigecycline	X-ray diffraction	3.1	2016-07-06
19	5JC9\|1\|AA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Structure of the Escherichia coli ribosome with the U1052G mutation in the 16S rRNA	X-ray diffraction	3.03	2016-07-06
20	4V7S\|1\|AA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the E. coli ribosome bound to telithromycin.	X-ray diffraction	3.25	2014-07-09
21	4V55\|1\|AA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin and ribosome recycling factor (RRF).	X-ray diffraction	4	2014-07-09
22	5JC9\|1\|BA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Structure of the Escherichia coli ribosome with the U1052G mutation in the 16S rRNA	X-ray diffraction	3.03	2016-07-06
23	4V57\|1\|CA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin and neomycin.	X-ray diffraction	3.5	2014-07-09
24	4V55\|1\|CA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin and ribosome recycling factor (RRF).	X-ray diffraction	4	2014-07-09
25	4WWW\|1\|QA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the E. coli ribosome bound to CEM-101	X-ray diffraction	3.1	2014-12-24
26	4V57\|1\|AA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin and neomycin.	X-ray diffraction	3.5	2014-07-09
27	4V7T\|1\|AA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the E. coli ribosome bound to chloramphenicol.	X-ray diffraction	3.19	2014-07-09
28	4V6D\|1\|AA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the E. coli 70S ribosome in an intermediate state of ratcheting	X-ray diffraction	3.81	2014-07-09
29	5J88\|1\|AA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Structure of the E coli 70S ribosome with the U1060A mutation in 16S rRNA	X-ray diffraction	3.32	2016-07-06
30	4V56\|1\|CA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin.	X-ray diffraction	3.93	2014-07-09
31	4V9P\|1\|FA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Control of ribosomal subunit rotation by elongation factor G	X-ray diffraction	2.9	2014-07-09
32	4YBB\|1\|AA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	High-resolution structure of the Escherichia coli ribosome	X-ray diffraction	2.1	2015-03-18
33	4V9O\|1\|FA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Control of ribosomal subunit rotation by elongation factor G	X-ray diffraction	2.9	2014-07-09
34	5IQR\|1\|2	Small subunit ribosomal RNA	SSU rRNA	Escherichia coli	Bacteria	RF00177	Structure of RelA bound to the 70S ribosome	Electron microscopy	3	2016-05-04
35	4U1U\|1\|CA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the E. coli ribosome bound to quinupristin.	X-ray diffraction	2.95	2014-07-30
36	4V50\|1\|AA	Small subunit ribosomal RNA	16S ribosomal RNA	Escherichia coli	Bacteria	RF00177	Crystal Structure of Ribosome with messenger RNA and the Anticodon stem-loop of P-site tRNA.	X-ray diffraction	3.22	2014-07-09
37	4V9O\|1\|BA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Control of ribosomal subunit rotation by elongation factor G	X-ray diffraction	2.9	2014-07-09
38	5J88\|1\|BA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Structure of the E coli 70S ribosome with the U1060A mutation in 16S rRNA	X-ray diffraction	3.32	2016-07-06
39	5AFI\|1\|a	Small subunit ribosomal RNA	16S ribosomal RNA	Escherichia coli	Bacteria	RF00177	2.9A Structure of E. coli ribosome-EF-TU complex by cs-corrected cryo-EM	Electron microscopy	2.9	2015-03-11
40	4V6E\|1\|AA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the E. coli 70S ribosome in an intermediate state of ratcheting	X-ray diffraction	3.71	2014-07-09
41	4U20\|1\|AA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the E. coli ribosome bound to flopristin.	X-ray diffraction	2.9	2014-07-30
42	4V50\|1\|CA	Small subunit ribosomal RNA	16S ribosomal RNA	Escherichia coli	Bacteria	RF00177	Crystal Structure of Ribosome with messenger RNA and the Anticodon stem-loop of P-site tRNA.	X-ray diffraction	3.22	2014-07-09
43	4V9P\|1\|BA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Control of ribosomal subunit rotation by elongation factor G	X-ray diffraction	2.9	2014-07-09
44	4V56\|1\|AA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin.	X-ray diffraction	3.93	2014-07-09
45	4U1U\|1\|AA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the E. coli ribosome bound to quinupristin.	X-ray diffraction	2.95	2014-07-30
46	4V6C\|1\|CA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the E. coli 70S ribosome in an intermediate state of ratcheting	X-ray diffraction	3.19	2014-07-09
47	4U26\|1\|AA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the E. coli ribosome bound to dalfopristin and quinupristin.	X-ray diffraction	2.8	2014-07-30
48	4U24\|1\|AA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the E. coli ribosome bound to dalfopristin.	X-ray diffraction	2.9	2014-07-30
49	4YBB\|1\|BA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	High-resolution structure of the Escherichia coli ribosome	X-ray diffraction	2.1	2015-03-18
50	4U20\|1\|CA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the E. coli ribosome bound to flopristin.	X-ray diffraction	2.9	2014-07-30
51	3J9Y\|1\|a	Small subunit ribosomal RNA	16S ribosomal RNA	Escherichia coli	Bacteria	RF00177	Cryo-EM structure of tetracycline resistance protein TetM bound to a translating E.coli ribosome	Electron microscopy	3.9	2015-04-15
52	4V6E\|1\|CA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the E. coli 70S ribosome in an intermediate state of ratcheting	X-ray diffraction	3.71	2014-07-09
53	4V7U\|1\|AA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the E. coli ribosome bound to erythromycin.	X-ray diffraction	3.1	2014-07-09
54	4U27\|1\|AA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the E. coli ribosome bound to flopristin and linopristin.	X-ray diffraction	2.8	2014-07-30
55	4V6D\|1\|CA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the E. coli 70S ribosome in an intermediate state of ratcheting	X-ray diffraction	3.81	2014-07-09
56	4WF1\|1\|AA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the E. coli ribosome bound to negamycin.	X-ray diffraction	3.09	2014-11-05
57	4V9P\|1\|HA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Control of ribosomal subunit rotation by elongation factor G	X-ray diffraction	2.9	2014-07-09
58	4U25\|1\|AA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the E. coli ribosome bound to virginiamycin M1.	X-ray diffraction	2.9	2014-07-30
59	4V7T\|1\|CA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the E. coli ribosome bound to chloramphenicol.	X-ray diffraction	3.19	2014-07-09
60	4V9O\|1\|DA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Control of ribosomal subunit rotation by elongation factor G	X-ray diffraction	2.9	2014-07-09
61	4WOI\|1\|DA	Small subunit ribosomal RNA	16S ribosomal RNA, Messenger RNA	Escherichia coli	Bacteria	RF00177	4,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2	X-ray diffraction	3	2015-08-05
62	4U1V\|1\|CA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the E. coli ribosome bound to linopristin.	X-ray diffraction	3	2014-07-30
63	4V9P\|1\|DA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Control of ribosomal subunit rotation by elongation factor G	X-ray diffraction	2.9	2014-07-09
64	4WWW\|1\|XA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the E. coli ribosome bound to CEM-101	X-ray diffraction	3.1	2014-12-24
65	4V7S\|1\|CA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the E. coli ribosome bound to telithromycin.	X-ray diffraction	3.25	2014-07-09
66	4U27\|1\|CA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the E. coli ribosome bound to flopristin and linopristin.	X-ray diffraction	2.8	2014-07-30
67	4V9D\|1\|BA	Small subunit ribosomal RNA	16S rRNA, messenger RNA	Escherichia coli	Bacteria	RF00177	Structures of the bacterial ribosome in classical and hybrid states of tRNA binding	X-ray diffraction	3	2014-07-09
68	4WF1\|1\|CA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the E. coli ribosome bound to negamycin.	X-ray diffraction	3.09	2014-11-05
69	4U1V\|1\|AA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the E. coli ribosome bound to linopristin.	X-ray diffraction	3	2014-07-30
70	5JTE\|1\|AA	Small subunit ribosomal RNA	16S ribosomal RNA	Escherichia coli	Bacteria	RF00177	Cryo-EM structure of an ErmBL-stalled ribosome in complex with A-, P-, and E-tRNA	Electron microscopy	3.6	2016-07-20
71	4V9D\|1\|AA	Small subunit ribosomal RNA	16S rRNA, messenger RNA	Escherichia coli	Bacteria	RF00177	Structures of the bacterial ribosome in classical and hybrid states of tRNA binding	X-ray diffraction	3	2014-07-09
72	5JU8\|1\|AA	Small subunit ribosomal RNA	16S ribosomal RNA	Escherichia coli	Bacteria	RF00177	Cryo-EM structure of an ErmBL-stalled ribosome in complex with P-, and E-tRNA	Electron microscopy	3.6	2016-07-20
73	4V7V\|1\|CA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the E. coli ribosome bound to clindamycin.	X-ray diffraction	3.29	2014-07-09
74	4U25\|1\|CA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the E. coli ribosome bound to virginiamycin M1.	X-ray diffraction	2.9	2014-07-30
75	4WOI\|1\|AA	Small subunit ribosomal RNA	16S ribosomal RNA, Messenger RNA	Escherichia coli	Bacteria	RF00177	4,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2	X-ray diffraction	3	2015-08-05
76	4V89\|1\|AA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal Structure of Release Factor RF3 Trapped in the GTP State on a Rotated Conformation of the Ribosome (without viomycin)	X-ray diffraction	3.7	2014-07-09
77	4V85\|1\|AA	Small subunit ribosomal RNA	16S rRNA			RF00177	Crystal Structure of Release Factor RF3 Trapped in the GTP State on a Rotated Conformation of the Ribosome.	X-ray diffraction	3.2	2014-07-09
78	4U26\|1\|CA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the E. coli ribosome bound to dalfopristin and quinupristin.	X-ray diffraction	2.8	2014-07-30
79	4U24\|1\|CA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the E. coli ribosome bound to dalfopristin.	X-ray diffraction	2.9	2014-07-30
80	3J9Z\|1\|SA	Small subunit ribosomal RNA	16S ribosomal RNA	Escherichia coli	Bacteria	RF00177	Activation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor G	Electron microscopy	3.6	2015-07-01
81	4V7U\|1\|CA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Crystal structure of the E. coli ribosome bound to erythromycin.	X-ray diffraction	3.1	2014-07-09
82	3JCE\|1\|a	Small subunit ribosomal RNA	16S ribosomal RNA	Escherichia coli	Bacteria	RF00177	Structure of Escherichia coli EF4 in pretranslocational ribosomes (Pre EF4)	Electron microscopy	3.2	2016-01-13
83	3JCJ\|1\|g	Small subunit ribosomal RNA	16S ribosomal RNA	Escherichia coli	Bacteria	RF00177	Structures of ribosome-bound initiation factor 2 reveal the mechanism of subunit association	Electron microscopy	3.7	2016-03-09
84	5L3P\|1\|a	Small subunit ribosomal RNA	16S ribosomal RNA	Escherichia coli	Bacteria	RF00177	Cryo-EM structure of stringent response factor RelA bound to ErmCL-stalled ribosome complex	Electron microscopy	3.7	2016-07-20
85	3JA1\|1\|SA	Small subunit ribosomal RNA	16S ribosomal RNA	Escherichia coli	Bacteria	RF00177	Activation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor G	Electron microscopy	3.6	2015-07-01
86	4V9O\|1\|HA	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Control of ribosomal subunit rotation by elongation factor G	X-ray diffraction	2.9	2014-07-09
87	4V9C\|1\|CA	Small subunit ribosomal RNA	16S ribosomal RNA, Messenger RNA, mRNA	Escherichia coli	Bacteria	RF00177	Allosteric control of the ribosome by small-molecule antibiotics	X-ray diffraction	3.3	2014-07-09
88	4V9C\|1\|AA	Small subunit ribosomal RNA	16S ribosomal RNA, Messenger RNA, mRNA	Escherichia coli	Bacteria	RF00177	Allosteric control of the ribosome by small-molecule antibiotics	X-ray diffraction	3.3	2014-07-09
89	3JBV\|1\|A	Small subunit ribosomal RNA	RNA (1530-MER)	Escherichia coli	Bacteria	RF00177	Mechanisms of Ribosome Stalling by SecM at Multiple Elongation Steps	Electron microscopy	3.32	2016-01-27
90	3JCD\|1\|a	Small subunit ribosomal RNA	16S ribosomal RNA	Escherichia coli	Bacteria	RF00177	Structure of Escherichia coli EF4 in posttranslocational ribosomes (Post EF4)	Electron microscopy	3.7	2016-01-13
91	3JBU\|1\|A	Small subunit ribosomal RNA	16S rRNA	Escherichia coli	Bacteria	RF00177	Mechanisms of Ribosome Stalling by SecM at Multiple Elongation Steps	Electron microscopy	3.64	2016-01-27
92	4V5B\|1\|BA	Small subunit ribosomal RNA	16S RIBOSOMAL RNA	Escherichia coli	Bacteria	RF00177	Structure of PDF binding helix in complex with the ribosome	X-ray diffraction	3.74	2014-07-09
93	4V5B\|1\|DA	Small subunit ribosomal RNA	16S RIBOSOMAL RNA	Escherichia coli	Bacteria	RF00177	Structure of PDF binding helix in complex with the ribosome	X-ray diffraction	3.74	2014-07-09

Release history

Release	7.0
Date	2017-04-05

Parents

This class	Parent classes	Release id	Intersection	Added to this class	Only in parent
NR_4.0_47864.1	NR_4.0_97398.1	7.0	(21) 3JBV\|1\|A, 4V6E\|1\|AA, 5IQR\|1\|2, 3JCJ\|1\|g, 5J91\|1\|AA, 5L3P\|1\|a, 4V50\|1\|AA, 4V6E\|1\|CA, 4V4Q\|1\|CA, 3JCD\|1\|a, 5J88\|1\|AA, 5JTE\|1\|AA, 4V50\|1\|CA, 3JBU\|1\|A, 3JCE\|1\|a, 5AFI\|1\|a, 5J88\|1\|BA, 5JU8\|1\|AA, 4V4Q\|1\|AA, 5J91\|1\|BA, 4V85\|1\|AA	(72) 4U24\|1\|CA, 4V7S\|1\|CA, 4V9O\|1\|FA, 4V54\|1\|CA, 4V53\|1\|CA, 4WWW\|1\|QA, 4U1V\|1\|CA, 4V6C\|1\|CA, 4V7V\|1\|CA, 4V4H\|1\|CA, 4WF1\|1\|AA, 4V5B\|1\|DA, 4V7T\|1\|CA, 3J9Y\|1\|a, 4U26\|1\|CA, 4V9P\|1\|BA, 4V6D\|1\|CA, 5J8A\|1\|AA, 4V9D\|1\|AA, 4V52\|1\|CA, 3JA1\|1\|SA, 4U1U\|1\|CA, 5JC9\|1\|AA, 4V56\|1\|CA, 4V9P\|1\|FA, 4U24\|1\|AA, 4V7S\|1\|AA, 4V9O\|1\|DA, 4V54\|1\|AA, 4V53\|1\|AA, 4WOI\|1\|DA, 4U1V\|1\|AA, 4V6C\|1\|AA, 4V7V\|1\|AA, 4V4H\|1\|AA, 4V9P\|1\|HA, 4V5B\|1\|BA, 4V7T\|1\|AA, 5JC9\|1\|BA, 4U26\|1\|AA, 4V9O\|1\|HA, 4V6D\|1\|AA, 4YBB\|1\|BA, 4V9C\|1\|CA, 4V52\|1\|AA, 3J9Z\|1\|SA, 4U1U\|1\|AA, 5J8A\|1\|BA, 4V56\|1\|AA, 4V9P\|1\|DA, 4U20\|1\|CA, 4V9O\|1\|BA, 4WOI\|1\|AA, 4V64\|1\|CA, 4V7U\|1\|CA, 4U27\|1\|CA, 4V57\|1\|CA, 4U25\|1\|CA, 4YBB\|1\|AA, 4V9C\|1\|AA, 4V55\|1\|CA, 4U20\|1\|AA, 4V9D\|1\|BA, 4WF1\|1\|CA, 4V64\|1\|AA, 4V7U\|1\|AA, 4U27\|1\|AA, 4V57\|1\|AA, 4U25\|1\|AA, 4WWW\|1\|XA, 4V89\|1\|AA, 4V55\|1\|AA	(0)

Children

This class	Descendant classes	Release id	Intersection	Only in this class	Added to child
NR_4.0_47864.1	NR_4.0_91531.1	8.0	(93) 3J9Z\|1\|SA, 4U24\|1\|AA, 4V64\|1\|CA, 4WF1\|1\|AA, 4V54\|1\|AA, 4V9C\|1\|CA, 5JTE\|1\|AA, 4U1U\|1\|AA, 4U27\|1\|CA, 4V7S\|1\|AA, 4YBB\|1\|BA, 4V5B\|1\|BA, 4V9P\|1\|BA, 3JCD\|1\|a, 4V52\|1\|CA, 4V85\|1\|AA, 4U26\|1\|AA, 5J91\|1\|AA, 4V6D\|1\|CA, 4WWW\|1\|QA, 4U20\|1\|AA, 4V56\|1\|AA, 4V9O\|1\|DA, 4V4Q\|1\|CA, 4V7U\|1\|AA, 5J88\|1\|BA, 3JA1\|1\|SA, 4U24\|1\|CA, 4V6C\|1\|AA, 4V54\|1\|CA, 4V9D\|1\|AA, 4U1U\|1\|CA, 4V4H\|1\|AA, 4V7S\|1\|CA, 5AFI\|1\|a, 4V9P\|1\|DA, 3JCE\|1\|a, 4U26\|1\|CA, 5J91\|1\|BA, 4V6E\|1\|AA, 4U20\|1\|CA, 4V56\|1\|CA, 4V9O\|1\|FA, 4V50\|1\|AA, 4V7U\|1\|CA, 5J8A\|1\|AA, 4WF1\|1\|CA, 4U1V\|1\|AA, 4V4H\|1\|CA, 5JU8\|1\|AA, 4V7T\|1\|AA, 4V5B\|1\|DA, 4V9P\|1\|FA, 4V53\|1\|AA, 4V89\|1\|AA, 5JC9\|1\|AA, 4WWW\|1\|XA, 4V57\|1\|AA, 4V50\|1\|CA, 4V7V\|1\|AA, 3JBU\|1\|A, 4U25\|1\|AA, 4V6C\|1\|CA, 4WOI\|1\|AA, 4V55\|1\|AA, 4V9D\|1\|BA, 5L3P\|1\|a, 5IQR\|1\|2, 4V64\|1\|AA, 3J9Y\|1\|a, 4V53\|1\|CA, 4V9C\|1\|AA, 4U27\|1\|AA, 3JCJ\|1\|g, 4V6E\|1\|CA, 4YBB\|1\|AA, 4V9O\|1\|HA, 3JBV\|1\|A, 4U25\|1\|CA, 5J8A\|1\|BA, 4V6D\|1\|AA, 4U1V\|1\|CA, 4V55\|1\|CA, 4V9O\|1\|BA, 4V4Q\|1\|AA, 4V7T\|1\|CA, 5J88\|1\|AA, 4V9P\|1\|HA, 5JC9\|1\|BA, 4V57\|1\|CA, 4V52\|1\|AA, 4V7V\|1\|CA, 4WOI\|1\|DA	(0)	(24) 5LZA\|1\|a, 5LZD\|1\|a, 5KPS\|1\|27, 5J7L\|1\|AA, 5MDV\|1\|2, 5KPX\|1\|26, 5KCR\|1\|1a, 5U4J\|1\|a, 5U9F\|1\|A, 5MDZ\|1\|2, 5LZE\|1\|a+5LZE\|1\|y+5LZE\|1\|v+5LZE\|1\|x, 5H5U\|1\|h, 5U4I\|1\|a, 5J5B\|1\|AA, 5U9G\|1\|A, 5MDW\|1\|2, 5J5B\|1\|BA, 5IT8\|1\|AA, 5KPW\|1\|26, 5J7L\|1\|BA, 5MGP\|1\|a, 5KCS\|1\|1a, 5MDY\|1\|2, 5IT8\|1\|BA

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).

#S	PDB	Title	Method	Resolution	Length
1	4V89\|1\|AA	Title: Crystal Structure of Release Factor RF3 Trapped in the GTP State on a Rotated Conformation of the Ribosome (without viomycin)	X-RAY DIFFRACTION	3.7	1532
2	4V85\|1\|AA	Title: Crystal Structure of Release Factor RF3 Trapped in the GTP State on a Rotated Conformation of the Ribosome.	X-RAY DIFFRACTION	3.2	1532
3	4V5B\|1\|DA	Title: Structure of PDF binding helix in complex with the ribosome	X-RAY DIFFRACTION	3.74	1530
4	4V4Q\|1\|CA	Title: Crystal structure of the bacterial ribosome from Escherichia coli at 3.5 A resolution.	X-RAY DIFFRACTION	3.46	1530
5	4V4H\|1\|CA	Title: Crystal structure of the bacterial ribosome from Escherichia coli in complex with the antibiotic kasugamyin at 3.5A resolution.	X-RAY DIFFRACTION	3.46	1530
6	4V54\|1\|CA	Title: Crystal structure of the bacterial ribosome from Escherichia coli in complex with ribosome recycling factor (RRF).	X-RAY DIFFRACTION	3.3	1530
7	4V64\|1\|CA	Title: Crystal structure of the bacterial ribosome from Escherichia coli in complex with hygromycin B.	X-RAY DIFFRACTION	3.5	1530
8	4V52\|1\|CA	Title: Crystal structure of the bacterial ribosome from Escherichia coli in complex with neomycin.	X-RAY DIFFRACTION	3.21	1530
9	4V53\|1\|CA	Title: Crystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin.	X-RAY DIFFRACTION	3.54	1530
10	4V55\|1\|CA	Title: Crystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin and ribosome recycling factor (RRF).	X-RAY DIFFRACTION	4	1530
11	4V57\|1\|CA	Title: Crystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin and neomycin.	X-RAY DIFFRACTION	3.5	1530
12	4V56\|1\|CA	Title: Crystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin.	X-RAY DIFFRACTION	3.93	1530
13	4V9P\|1\|FA	Title: Control of ribosomal subunit rotation by elongation factor G	X-RAY DIFFRACTION	2.9	1533
14	4V9P\|1\|HA	Title: Control of ribosomal subunit rotation by elongation factor G	X-RAY DIFFRACTION	2.9	1533
15	4V9O\|1\|HA	Title: Control of ribosomal subunit rotation by elongation factor G	X-RAY DIFFRACTION	2.9	1533
16	4V9P\|1\|BA	Title: Control of ribosomal subunit rotation by elongation factor G	X-RAY DIFFRACTION	2.9	1533
17	4V9P\|1\|DA	Title: Control of ribosomal subunit rotation by elongation factor G	X-RAY DIFFRACTION	2.9	1533
18	5J88\|1\|AA	Title: Structure of the E coli 70S ribosome with the U1060A mutation in 16S rRNA	X-RAY DIFFRACTION	3.32	1523
19	5JC9\|1\|AA	Title: Structure of the Escherichia coli ribosome with the U1052G mutation in the 16S rRNA	X-RAY DIFFRACTION	3.03	1523
20	5J8A\|1\|AA	Title: Structure of the E coli 70S ribosome with the U1052G mutation in 16S rRNA bound to tigecycline	X-RAY DIFFRACTION	3.1	1523
21	5J91\|1\|AA	Title: Structure of the Wild-type 70S E coli ribosome bound to Tigecycline	X-RAY DIFFRACTION	2.96	1523
22	4YBB\|1\|AA	Title: High-resolution structure of the Escherichia coli ribosome	X-RAY DIFFRACTION	2.1	1523
23	4WF1\|1\|AA	Title: Crystal structure of the E. coli ribosome bound to negamycin.	X-RAY DIFFRACTION	3.09	1538
24	4U1U\|1\|AA	Title: Crystal structure of the E. coli ribosome bound to quinupristin.	X-RAY DIFFRACTION	2.95	1538
25	4U20\|1\|AA	Title: Crystal structure of the E. coli ribosome bound to flopristin.	X-RAY DIFFRACTION	2.9	1538
26	4U1V\|1\|AA	Title: Crystal structure of the E. coli ribosome bound to linopristin.	X-RAY DIFFRACTION	3	1538
27	4U27\|1\|AA	Title: Crystal structure of the E. coli ribosome bound to flopristin and linopristin.	X-RAY DIFFRACTION	2.8	1538
28	4U25\|1\|AA	Title: Crystal structure of the E. coli ribosome bound to virginiamycin M1.	X-RAY DIFFRACTION	2.9	1538
29	4U26\|1\|AA	Title: Crystal structure of the E. coli ribosome bound to dalfopristin and quinupristin.	X-RAY DIFFRACTION	2.8	1538
30	4U24\|1\|AA	Title: Crystal structure of the E. coli ribosome bound to dalfopristin.	X-RAY DIFFRACTION	2.9	1538
31	4V7V\|1\|AA	Title: Crystal structure of the E. coli ribosome bound to clindamycin.	X-RAY DIFFRACTION	3.29	1533
32	4V7S\|1\|AA	Title: Crystal structure of the E. coli ribosome bound to telithromycin.	X-RAY DIFFRACTION	3.25	1533
33	4V6C\|1\|AA	Title: Crystal structure of the E. coli 70S ribosome in an intermediate state of ratcheting	X-RAY DIFFRACTION	3.19	1533
34	4V7T\|1\|AA	Title: Crystal structure of the E. coli ribosome bound to chloramphenicol.	X-RAY DIFFRACTION	3.19	1533
35	4WWW\|1\|QA	Title: Crystal structure of the E. coli ribosome bound to CEM-101	X-RAY DIFFRACTION	3.1	1533
36	4V7U\|1\|AA	Title: Crystal structure of the E. coli ribosome bound to erythromycin.	X-RAY DIFFRACTION	3.1	1533
37	4V9O\|1\|DA	Title: Control of ribosomal subunit rotation by elongation factor G	X-RAY DIFFRACTION	2.9	1533
38	4V9O\|1\|BA	Title: Control of ribosomal subunit rotation by elongation factor G	X-RAY DIFFRACTION	2.9	1533
39	4V9O\|1\|FA	Title: Control of ribosomal subunit rotation by elongation factor G	X-RAY DIFFRACTION	2.9	1533
40	5JC9\|1\|BA	Title: Structure of the Escherichia coli ribosome with the U1052G mutation in the 16S rRNA	X-RAY DIFFRACTION	3.03	1522
41	5J8A\|1\|BA	Title: Structure of the E coli 70S ribosome with the U1052G mutation in 16S rRNA bound to tigecycline	X-RAY DIFFRACTION	3.1	1522
42	5J91\|1\|BA	Title: Structure of the Wild-type 70S E coli ribosome bound to Tigecycline	X-RAY DIFFRACTION	2.96	1522
43	5J88\|1\|BA	Title: Structure of the E coli 70S ribosome with the U1060A mutation in 16S rRNA	X-RAY DIFFRACTION	3.32	1522
44	4YBB\|1\|BA	Title: High-resolution structure of the Escherichia coli ribosome	X-RAY DIFFRACTION	2.1	1522
45	4WF1\|1\|CA	Title: Crystal structure of the E. coli ribosome bound to negamycin.	X-RAY DIFFRACTION	3.09	1539
46	4U1U\|1\|CA	Title: Crystal structure of the E. coli ribosome bound to quinupristin.	X-RAY DIFFRACTION	2.95	1539
47	4U20\|1\|CA	Title: Crystal structure of the E. coli ribosome bound to flopristin.	X-RAY DIFFRACTION	2.9	1539
48	4U1V\|1\|CA	Title: Crystal structure of the E. coli ribosome bound to linopristin.	X-RAY DIFFRACTION	3	1539
49	4U27\|1\|CA	Title: Crystal structure of the E. coli ribosome bound to flopristin and linopristin.	X-RAY DIFFRACTION	2.8	1539
50	4U25\|1\|CA	Title: Crystal structure of the E. coli ribosome bound to virginiamycin M1.	X-RAY DIFFRACTION	2.9	1539
51	4U26\|1\|CA	Title: Crystal structure of the E. coli ribosome bound to dalfopristin and quinupristin.	X-RAY DIFFRACTION	2.8	1539
52	4U24\|1\|CA	Title: Crystal structure of the E. coli ribosome bound to dalfopristin.	X-RAY DIFFRACTION	2.9	1539
53	4V7U\|1\|CA	Title: Crystal structure of the E. coli ribosome bound to erythromycin.	X-RAY DIFFRACTION	3.1	1530
54	4WWW\|1\|XA	Title: Crystal structure of the E. coli ribosome bound to CEM-101	X-RAY DIFFRACTION	3.1	1530
55	4V7S\|1\|CA	Title: Crystal structure of the E. coli ribosome bound to telithromycin.	X-RAY DIFFRACTION	3.25	1530
56	4V7V\|1\|CA	Title: Crystal structure of the E. coli ribosome bound to clindamycin.	X-RAY DIFFRACTION	3.29	1530
57	4V7T\|1\|CA	Title: Crystal structure of the E. coli ribosome bound to chloramphenicol.	X-RAY DIFFRACTION	3.19	1530
58	4V6C\|1\|CA	Title: Crystal structure of the E. coli 70S ribosome in an intermediate state of ratcheting	X-RAY DIFFRACTION	3.19	1530
59	4V57\|1\|AA	Title: Crystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin and neomycin.	X-RAY DIFFRACTION	3.5	1530
60	4V52\|1\|AA	Title: Crystal structure of the bacterial ribosome from Escherichia coli in complex with neomycin.	X-RAY DIFFRACTION	3.21	1530
61	4V53\|1\|AA	Title: Crystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin.	X-RAY DIFFRACTION	3.54	1530
62	4V55\|1\|AA	Title: Crystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin and ribosome recycling factor (RRF).	X-RAY DIFFRACTION	4	1530
63	4V64\|1\|AA	Title: Crystal structure of the bacterial ribosome from Escherichia coli in complex with hygromycin B.	X-RAY DIFFRACTION	3.5	1530
64	4V54\|1\|AA	Title: Crystal structure of the bacterial ribosome from Escherichia coli in complex with ribosome recycling factor (RRF).	X-RAY DIFFRACTION	3.3	1530
65	4V4H\|1\|AA	Title: Crystal structure of the bacterial ribosome from Escherichia coli in complex with the antibiotic kasugamyin at 3.5A resolution.	X-RAY DIFFRACTION	3.46	1530
66	4V4Q\|1\|AA	Title: Crystal structure of the bacterial ribosome from Escherichia coli at 3.5 A resolution.	X-RAY DIFFRACTION	3.46	1530
67	4V56\|1\|AA	Title: Crystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin.	X-RAY DIFFRACTION	3.93	1530
68	4V5B\|1\|BA	Title: Structure of PDF binding helix in complex with the ribosome	X-RAY DIFFRACTION	3.74	1530
69	4V50\|1\|CA	Title: Crystal Structure of Ribosome with messenger RNA and the Anticodon stem-loop of P-site tRNA.	X-RAY DIFFRACTION	3.22	1530
70	4V50\|1\|AA	Title: Crystal Structure of Ribosome with messenger RNA and the Anticodon stem-loop of P-site tRNA.	X-RAY DIFFRACTION	3.22	1530
71	4V6D\|1\|CA	Title: Crystal structure of the E. coli 70S ribosome in an intermediate state of ratcheting	X-RAY DIFFRACTION	3.81	1530
72	4V6E\|1\|CA	Title: Crystal structure of the E. coli 70S ribosome in an intermediate state of ratcheting	X-RAY DIFFRACTION	3.71	1530
73	4V9D\|1\|AA	Title: Structures of the bacterial ribosome in classical and hybrid states of tRNA binding	X-RAY DIFFRACTION	3	1538
74	3JCJ\|1\|g	Title: Structures of ribosome-bound initiation factor 2 reveal the mechanism of subunit association	ELECTRON MICROSCOPY	3.7	1539
75	5JU8\|1\|AA	Title: Cryo-EM structure of an ErmBL-stalled ribosome in complex with P-, and E-tRNA	ELECTRON MICROSCOPY	3.6	1539
76	5JTE\|1\|AA	Title: Cryo-EM structure of an ErmBL-stalled ribosome in complex with A-, P-, and E-tRNA	ELECTRON MICROSCOPY	3.6	1539
77	5IQR\|1\|2	Title: Structure of RelA bound to the 70S ribosome	ELECTRON MICROSCOPY	3	1522
78	4V9D\|1\|BA	Title: Structures of the bacterial ribosome in classical and hybrid states of tRNA binding	X-RAY DIFFRACTION	3	1539
79	4V9C\|1\|AA	Title: Allosteric control of the ribosome by small-molecule antibiotics	X-RAY DIFFRACTION	3.3	1539
80	4WOI\|1\|DA	Title: 4,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2	X-RAY DIFFRACTION	3	1539
81	5AFI\|1\|a	Title: 2.9A Structure of E. coli ribosome-EF-TU complex by cs-corrected cryo-EM	ELECTRON MICROSCOPY	2.9	1528
82	3J9Y\|1\|a	Title: Cryo-EM structure of tetracycline resistance protein TetM bound to a translating E.coli ribosome	ELECTRON MICROSCOPY	3.9	1528
83	5L3P\|1\|a	Title: Cryo-EM structure of stringent response factor RelA bound to ErmCL-stalled ribosome complex	ELECTRON MICROSCOPY	3.7	1528
84	4V9C\|1\|CA	Title: Allosteric control of the ribosome by small-molecule antibiotics	X-RAY DIFFRACTION	3.3	1538
85	4WOI\|1\|AA	Title: 4,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2	X-RAY DIFFRACTION	3	1538
86	4V6D\|1\|AA	Title: Crystal structure of the E. coli 70S ribosome in an intermediate state of ratcheting	X-RAY DIFFRACTION	3.81	1533
87	4V6E\|1\|AA	Title: Crystal structure of the E. coli 70S ribosome in an intermediate state of ratcheting	X-RAY DIFFRACTION	3.71	1533
88	3JCE\|1\|a	Title: Structure of Escherichia coli EF4 in pretranslocational ribosomes (Pre EF4)	ELECTRON MICROSCOPY	3.2	1533
89	3JCD\|1\|a	Title: Structure of Escherichia coli EF4 in posttranslocational ribosomes (Post EF4)	ELECTRON MICROSCOPY	3.7	1533
90	3J9Z\|1\|SA	Title: Activation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor G	ELECTRON MICROSCOPY	3.6	1542
91	3JBU\|1\|A	Title: Mechanisms of Ribosome Stalling by SecM at Multiple Elongation Steps	ELECTRON MICROSCOPY	3.64	1530
92	3JBV\|1\|A	Title: Mechanisms of Ribosome Stalling by SecM at Multiple Elongation Steps	ELECTRON MICROSCOPY	3.32	1530
93	3JA1\|1\|SA	Title: Activation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor G	ELECTRON MICROSCOPY	3.6	1542

Coloring options: Nucleotide numbers

Equivalence class NR_4.0_47864.1 Obsolete

Release history

Parents

Children