Equivalence class NR_4.0_41248.1 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 4OQ9|1|s (rep) | RNA (5'-R(P*UP*UP*UP*UP*UP*UP*UP*UP*UP*U)-3') | Tobacco virtovirus 1 | Viruses | Satellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraints | X-ray diffraction | 1.45 | 2014-09-10 | ||
| 2 | 4OQ9|1|r | RNA (5'-R(P*UP*UP*UP*UP*UP*UP*UP*UP*UP*U)-3') | Tobacco virtovirus 1 | Viruses | Satellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraints | X-ray diffraction | 1.45 | 2014-09-10 | ||
| 3 | 4OQ9|1|q | RNA (5'-R(P*UP*UP*UP*UP*UP*UP*UP*UP*UP*U)-3') | Tobacco virtovirus 1 | Viruses | Satellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraints | X-ray diffraction | 1.45 | 2014-09-10 | ||
| 4 | 4OQ9|1|p | RNA (5'-R(P*UP*UP*UP*UP*UP*UP*UP*UP*UP*U)-3') | Tobacco virtovirus 1 | Viruses | Satellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraints | X-ray diffraction | 1.45 | 2014-09-10 | ||
| 5 | 4OQ9|1|o | RNA (5'-R(P*UP*UP*UP*UP*UP*UP*UP*UP*UP*U)-3') | Tobacco virtovirus 1 | Viruses | Satellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraints | X-ray diffraction | 1.45 | 2014-09-10 | ||
| 6 | 4OQ9|1|l | RNA (5'-R(P*UP*UP*UP*UP*UP*UP*UP*UP*UP*U)-3') | Tobacco virtovirus 1 | Viruses | Satellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraints | X-ray diffraction | 1.45 | 2014-09-10 | ||
| 7 | 4OQ9|1|k | RNA (5'-R(P*UP*UP*UP*UP*UP*UP*UP*UP*UP*U)-3') | Tobacco virtovirus 1 | Viruses | Satellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraints | X-ray diffraction | 1.45 | 2014-09-10 | ||
| 8 | 4OQ9|1|j | RNA (5'-R(P*UP*UP*UP*UP*UP*UP*UP*UP*UP*U)-3') | Tobacco virtovirus 1 | Viruses | Satellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraints | X-ray diffraction | 1.45 | 2014-09-10 | ||
| 9 | 4OQ9|1|f | RNA (5'-R(P*UP*UP*UP*UP*UP*UP*UP*UP*UP*U)-3') | Tobacco virtovirus 1 | Viruses | Satellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraints | X-ray diffraction | 1.45 | 2014-09-10 |
Release history
| Release | 6.0 |
|---|---|
| Date | 2017-04-04 |
Parents
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
|---|---|---|---|---|---|
| NR_4.0_41248.1 | NR_4.0_97130.1 | 7.0 | (9) 4OQ9|1|p, 4OQ9|1|q, 4OQ9|1|s, 4OQ9|1|j, 4OQ9|1|l, 4OQ9|1|o, 4OQ9|1|k, 4OQ9|1|f, 4OQ9|1|r | (0) | (9) 4NIA|1|f, 4NIA|1|r, 4NIA|1|p, 4NIA|1|o, 4NIA|1|k, 4NIA|1|s, 4NIA|1|q, 4NIA|1|l, 4NIA|1|j |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length | NAKB_NA_annotation | NAKB_protein_annotation |
|---|---|---|---|---|---|---|---|
| 1 | 4OQ9|1|s | Title: Satellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraints | X-RAY DIFFRACTION | 1.45 | 10 | ||
| 2 | 4OQ9|1|q | Title: Satellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraints | X-RAY DIFFRACTION | 1.45 | 10 | ||
| 3 | 4OQ9|1|p | Title: Satellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraints | X-RAY DIFFRACTION | 1.45 | 10 | ||
| 4 | 4OQ9|1|k | Title: Satellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraints | X-RAY DIFFRACTION | 1.45 | 10 | ||
| 5 | 4OQ9|1|j | Title: Satellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraints | X-RAY DIFFRACTION | 1.45 | 10 | ||
| 6 | 4OQ9|1|l | Title: Satellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraints | X-RAY DIFFRACTION | 1.45 | 10 | ||
| 7 | 4OQ9|1|o | Title: Satellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraints | X-RAY DIFFRACTION | 1.45 | 10 | ||
| 8 | 4OQ9|1|r | Title: Satellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraints | X-RAY DIFFRACTION | 1.45 | 10 | ||
| 9 | 4OQ9|1|f | Title: Satellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraints | X-RAY DIFFRACTION | 1.45 | 10 |
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