Equivalence class NR_4.0_36880.1 Obsolete
# | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
---|---|---|---|---|---|---|---|---|---|---|
1 | 3PLA|1|N+ 3PLA|1|O (rep) | C/D guide RNA, RNA (5'-R(*CP*CP*AP*UP*GP*AP*GP*UP*GP*U)-3') | synthetic construct | Synthetic | Crystal structure of a catalytically active substrate-bound box C/D RNP from Sulfolobus solfataricus | X-ray diffraction | 3.15 | 2011-01-26 | ||
2 | 3PLA|1|G+ 3PLA|1|H+ 3PLA|1|I+ 3PLA|1|J | C/D guide RNA, RNA (5'-R(*CP*CP*AP*UP*GP*AP*GP*UP*GP*U)-3') | synthetic construct | Synthetic | Crystal structure of a catalytically active substrate-bound box C/D RNP from Sulfolobus solfataricus | X-ray diffraction | 3.15 | 2011-01-26 |
Parents
This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
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Children
This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
---|---|---|---|---|---|
NR_4.0_36880.1 | NR_4.0_64693.1 | 8.0 | (2) 3PLA|1|N+3PLA|1|O, 3PLA|1|G+3PLA|1|H+3PLA|1|I+3PLA|1|J | (0) | (6) 5GIP|1|Q+5GIP|1|R+5GIP|1|S+5GIP|1|T, 5GIP|1|G+5GIP|1|H+5GIP|1|I+5GIP|1|J, 5GIO|1|N+5GIO|1|O, 5GIO|1|G+5GIO|1|H+5GIO|1|I+5GIO|1|J, 5GIN|1|N+5GIN|1|O, 5GIN|1|G+5GIN|1|H+5GIN|1|I+5GIN|1|J |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).#S | PDB | Title | Method | Resolution | Length | NAKB_NA_annotation | NAKB_protein_annotation |
---|---|---|---|---|---|---|---|
1 | 3PLA|1|G+3PLA|1|H+3PLA|1|I+3PLA|1|J | Title: Crystal structure of a catalytically active substrate-bound box C/D RNP from Sulfolobus solfataricus | X-RAY DIFFRACTION | 3.15 | 35 | ||
2 | 3PLA|1|N+3PLA|1|O | Title: Crystal structure of a catalytically active substrate-bound box C/D RNP from Sulfolobus solfataricus | X-RAY DIFFRACTION | 3.15 | 31 |
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