Equivalence class NR_4.0_34306.1 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 4V8U|1|CV (rep) | Transfer RNA | MRNA, RNA | Thermus thermophilus | Bacteria | RF00005 | Crystal Structure of 70S Ribosome with Both Cognate tRNAs in the E and P Sites Representing an Authentic Elongation Complex. | X-ray diffraction | 3.7 | 2014-07-09 |
| 2 | 4V8U|1|AV | Transfer RNA | MRNA, RNA | Thermus thermophilus | Bacteria | RF00005 | Crystal Structure of 70S Ribosome with Both Cognate tRNAs in the E and P Sites Representing an Authentic Elongation Complex. | X-ray diffraction | 3.7 | 2014-07-09 |
| 3 | 4WT8|1|D3 | Transfer RNA | A site tNA, E site tNA | Thermus thermophilus | Bacteria | RF00005 | Crystal Structure of bactobolin A bound to 70S ribosome-tRNA complex | X-ray diffraction | 3.4 | 2015-01-21 |
| 4 | 4WT8|1|C3 | Transfer RNA | A site tNA, E site tNA | Thermus thermophilus | Bacteria | RF00005 | Crystal Structure of bactobolin A bound to 70S ribosome-tRNA complex | X-ray diffraction | 3.4 | 2015-01-21 |
| 5 | 4WT8|1|C2 | Transfer RNA | A site tNA, E site tNA, mRNA | Thermus thermophilus | Bacteria | RF00005 | Crystal Structure of bactobolin A bound to 70S ribosome-tRNA complex | X-ray diffraction | 3.4 | 2015-01-21 |
Release history
| Release | 6.0 |
|---|---|
| Date | 2017-04-04 |
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
|---|---|---|---|---|---|
| NR_4.0_34306.1 | NR_4.0_39428.1 | 6.0 | (5) 4WT8|1|C3, 4WT8|1|C2, 4V8U|1|CV, 4V8U|1|AV, 4WT8|1|D3 | (0) | (6) 3J9Z|1|S7, 4V5A|1|AV+4V5A|1|AX, 4V5A|1|CV+4V5A|1|CX, 4V90|1|AV, 5J8B|1|w, 5J8B|1|y |
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
|---|---|---|---|---|---|
| NR_4.0_34306.1 | NR_4.0_61646.1 | 7.0 | (5) 4WT8|1|C2, 4WT8|1|D3, 4V8U|1|CV, 4WT8|1|C3, 4V8U|1|AV | (0) | (6) 4V5A|1|AV+4V5A|1|AX, 5J8B|1|y, 3J9Z|1|S7, 5J8B|1|w, 4V90|1|AV, 4V5A|1|CV+4V5A|1|CX |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length | NAKB_NA_annotation | NAKB_protein_annotation |
|---|---|---|---|---|---|---|---|
| 1 | 4WT8|1|D3 | Title: Crystal Structure of bactobolin A bound to 70S ribosome-tRNA complex | X-RAY DIFFRACTION | 3.4 | 76 | ||
| 2 | 4WT8|1|C3 | Title: Crystal Structure of bactobolin A bound to 70S ribosome-tRNA complex | X-RAY DIFFRACTION | 3.4 | 76 | ||
| 3 | 4WT8|1|C2 | Title: Crystal Structure of bactobolin A bound to 70S ribosome-tRNA complex | X-RAY DIFFRACTION | 3.4 | 75 | ||
| 4 | 4V8U|1|AV | Title: Crystal Structure of 70S Ribosome with Both Cognate tRNAs in the E and P Sites Representing an Authentic Elongation Complex. | X-RAY DIFFRACTION | 3.7 | 76 | ||
| 5 | 4V8U|1|CV | Title: Crystal Structure of 70S Ribosome with Both Cognate tRNAs in the E and P Sites Representing an Authentic Elongation Complex. | X-RAY DIFFRACTION | 3.7 | 76 |
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