#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. ÅDate
13TD1|1|B+ 3TD1|1|A (rep)RNA (5'-R(*UP*UP*GP*CP*GP*UP*CP*GP*CP*GP*(5BU)P*CP*GP*AP*CP*GP*AP*AP*GP*UP*CP*GP*C)-3')Crystal structure of the bacterial A1408G-mutant and the protozoa cytoplasmic ribosomal decoding site in complex with geneticinX-ray diffraction2.12011-12-07
22ESI|1|A+ 2ESI|1|B5'-R(*UP*UP*GP*CP*GP*UP*CP*AP*CP*AP*CP*CP*GP*GP*UP*GP*AP*AP*GP*UP*CP*GP*C)-3'Complex between Kanamycin A and the 16S-Rrna A Site.X-ray diffraction32005-12-20
35BWS|1|A+ 5BWS|1|BRNA (5'-D(*UP*UP*GP*CP*GP*UP*CP*AP*CP*GP*CP*CP*GP*GP*CP*GP*AP*AP*GP*UP*CP*GP*C)-3')synthetic constructSyntheticCrystal structure of the bacterial ribosomal decoding site in complex with 4'-deoxy-4'-fluoro neamine analog (axial 4'-F)X-ray diffraction2.62016-06-22
41YRJ|1|A+ 1YRJ|1|BBacterial 16 S Ribosomal RNA A Site OligonucleotideCrystal Structure of Apramycin bound to a Ribosomal RNA A site oligonucleotideX-ray diffraction2.72005-06-07
54PDQ|1|A+ 4PDQ|1|BRNA (5'-*UP*UP*GP*CP*GP*UP*CP*AP*CP*GP*CP*CP*GP*GP*CP*GP*AP*AP*GP*UP*CP*GP*C-3')synthetic constructSyntheticCrystal structure of the bacterial ribosomal decoding site in complex with 4'-deoxy-4'-fluoro neomycin analogX-ray diffraction32015-01-07
62F4T|1|B+ 2F4T|1|A5'-R(*GP*CP*GP*UP*CP*AP*CP*AP*CP*CP*GP*GP*UP*GP*AP*AP*GP*UP*CP*GP*C)-3', 5'-R(*UP*UP*GP*CP*GP*UP*CP*AP*CP*AP*CP*CP*GP*GP*UP*GP*AP*AP*GP*UP*CP*GP*C)-3'Asite RNA + designer antibioticX-ray diffraction32006-05-02
74P43|1|B+ 4P43|1|A5'-R(*UP*UP*GP*CP*GP*UP*CP*UP*CP*GP*UP*CP*GP*AP*CP*GP*AP*AP*GP*UP*CP*GP*C)-3'synthetic constructSyntheticCrystal structure of the bacterial A1408U-mutant ribosomal decoding site (C2 form 2)X-ray diffraction22016-05-04
85BXK|1|C+ 5BXK|1|DRNA (5'-D(P*UP*UP*GP*CP*GP*UP*CP*AP*CP*GP*CP*CP*GP*GP*CP*GP*AP*AP*GP*UP*CP*GP*C)-3')synthetic constructSyntheticCrystal structure of the bacterial ribosomal decoding site in complex with 4'-deoxy-4'-fluoro neamine analog (equatorial 4'-F)X-ray diffraction3.12016-06-22
95BWS|1|C+ 5BWS|1|DRNA (5'-D(*UP*UP*GP*CP*GP*UP*CP*AP*CP*GP*CP*CP*GP*GP*CP*GP*AP*AP*GP*UP*CP*GP*C)-3')synthetic constructSyntheticCrystal structure of the bacterial ribosomal decoding site in complex with 4'-deoxy-4'-fluoro neamine analog (axial 4'-F)X-ray diffraction2.62016-06-22
104P3T|1|A+ 4P3T|1|B5'-D(*UP*UP*GP*CP*GP*UP*CP*CP*CP*GP*(5BU)P*CP*GP*AP*CP*GP*AP*AP*GP*UP*CP*GP*C)-3'synthetic constructSyntheticCrystal structure of the bacterial A1408C-mutant ribosomal decoding siteX-ray diffraction1.62016-05-04
112O3V|1|A+ 2O3V|1|BRNA (5'-R(*UP*UP*GP*CP*GP*UP*CP*GP*CP*UP*CP*CP*GP*GP*AP*AP*AP*AP*GP*UP*CP*GP*C)-3')Crystal Structure of the Homo sapiens Cytoplasmic Ribosomal Decoding Site complexed with paromamine derivative NB33X-ray diffraction2.82007-11-06
123BNS|1|A+ 3BNS|1|BA site of human mitochondrial ribosome, chain three, A site of human mitochondrial ribosome, chain twoCrystal Structure of the Homo sapiens Mitochondrial Ribosomal Decoding Site (A1555G mutant, Br-derivative)X-ray diffraction1.92008-06-24
132G5K|1|A+ 2G5K|1|B5'-R(*UP*UP*GP*CP*GP*UP*CP*GP*CP*UP*CP*CP*GP*GP*AP*AP*AP*AP*GP*UP*CP*GP*C)-3'Crystal Structure of the Homo sapiens Cytoplasmic Ribosomal Decoding Site complexed with ApramycinX-ray diffraction2.82006-06-20
143BNR|1|A+ 3BNR|1|BA site of human mitochondrial ribosome, chain one, A site of human mitochondrial ribosome, chain twoCrystal Structure of the Homo sapiens Mitochondrial Ribosomal Decoding Site in the presence of nonspecifically bound paromomycin (A1555G mutant, Br-derivative)X-ray diffraction2.12008-06-24
152O3W|1|A+ 2O3W|1|BRNA (5'-R(*UP*UP*GP*CP*GP*UP*CP*GP*CP*UP*CP*CP*GP*GP*AP*AP*AP*AP*GP*UP*CP*GP*C)-3')Crystal Structure of the Homo sapiens Cytoplasmic Ribosomal Decoding Site in presence of paromomycinX-ray diffraction2.82007-11-06
165BXK|1|A+ 5BXK|1|BRNA (5'-D(P*UP*UP*GP*CP*GP*UP*CP*AP*CP*GP*CP*CP*GP*GP*CP*GP*AP*AP*GP*UP*CP*GP*C)-3')synthetic constructSyntheticCrystal structure of the bacterial ribosomal decoding site in complex with 4'-deoxy-4'-fluoro neamine analog (equatorial 4'-F)X-ray diffraction3.12016-06-22
172FQN|1|A+ 2FQN|1|B5'-R(*UP*UP*GP*CP*GP*UP*CP*GP*CP*UP*CP*CP*GP*GP*AP*AP*AP*AP*GP*UP*CP*GP*C)-3'Crystal structure of the Homo sapiens cytoplasmic ribosomal decoding A siteX-ray diffraction2.32006-02-14
184GPW|1|A+ 4GPW|1|BRNA (5'-R(*UP*UP*GP*CP*GP*UP*CP*GP*CP*GP*CP*CP*GP*GP*CP*GP*AP*AP*GP*UP*CP*GP*C)-3')Crystal structure of the protozoal cytoplasmic ribosomal decoding site in complex with 6'-hydroxysisomicin (P21212 form)X-ray diffraction32013-04-03
194GPY|1|A+ 4GPY|1|BRNA (5'-R(*UP*UP*GP*CP*GP*UP*CP*AP*CP*GP*CP*CP*GP*GP*CP*GP*AP*AP*GP*UP*CP*GP*C)-3')Crystal structure of the bacterial ribosomal decoding site in complex with 6'-hydroxysisomicinX-ray diffraction2.82013-04-03
203BNQ|1|A+ 3BNQ|1|BA site of human mitochondrial ribosome, A chainCrystal Structure of the Homo sapiens Mitochondrial Ribosomal Decoding Site in the Presence of SrCl2 (A1555G mutant, Br-derivative)X-ray diffraction22008-06-24
214WCP|1|A+ 4WCP|1|B+ 4WCP|1|CRNA (5'-R(*UP*UP*GP*CP*GP*UP*CP*(1MA)P*CP*GP*UP*CP*GP*AP*CP*GP*AP*AP*GP*UP*CP*GP*C)-3')Crystal structure of the bacterial A1408me1A-mutant ribosomal decoding siteX-ray diffraction2.42015-09-09
222O3Y|1|A+ 2O3Y|1|BRNA (5'-R(*UP*UP*GP*CP*GP*UP*CP*GP*CP*UP*CP*CP*GP*GP*AP*AP*AP*AP*GP*UP*CP*GP*C)-3')Crystal Structure of the Homo sapiens Cytoplasmic Ribosomal Decoding Site in Presence of Paromamine Derivative NB30X-ray diffraction2.72007-11-06
233TD0|1|B+ 3TD0|1|ARNA (5'-R(*UP*UP*GP*CP*GP*UP*CP*GP*CP*GP*(5BU)P*CP*GP*AP*CP*GP*AP*AP*GP*UP*CP*GP*C)-3')Crystal structure of the bacterial A1408G-mutant and the protozoa cytoplasmic ribosomal decoding siteX-ray diffraction1.62011-12-07
244K31|1|B+ 4K31|1|CRNA (5'-R(*UP*UP*GP*CP*GP*UP*CP*GP*UP*UP*CP*CP*GP*GP*AP*AP*AP*AP*GP*UP*CP*GP*C)-3')LeishmaniaEukaryaCrystal structure of apramycin bound to the leishmanial rRNA A-siteX-ray diffraction1.412013-07-31
253BNR|1|C+ 3BNR|1|DA site of human mitochondrial ribosome, chain one, A site of human mitochondrial ribosome, chain threeCrystal Structure of the Homo sapiens Mitochondrial Ribosomal Decoding Site in the presence of nonspecifically bound paromomycin (A1555G mutant, Br-derivative)X-ray diffraction2.12008-06-24
263BNS|1|C+ 3BNS|1|DA site of human mitochondrial ribosome, chain threeCrystal Structure of the Homo sapiens Mitochondrial Ribosomal Decoding Site (A1555G mutant, Br-derivative)X-ray diffraction1.92008-06-24
273BNQ|1|C+ 3BNQ|1|DA site of human mitochondrial ribosome, A chain, A site of human mitochondrial ribosome, B chainCrystal Structure of the Homo sapiens Mitochondrial Ribosomal Decoding Site in the Presence of SrCl2 (A1555G mutant, Br-derivative)X-ray diffraction22008-06-24
282O3X|1|A+ 2O3X|1|BRNA (5'-R(*UP*UP*GP*CP*GP*UP*CP*AP*CP*AP*CP*CP*GP*GP*UP*GP*AP*AP*GP*UP*CP*GP*C)-3')Crystal Structure of the Prokaryotic Ribosomal Decoding Site Complexed with Paromamine Derivative NB30X-ray diffraction2.92007-11-06
294GPX|1|A+ 4GPX|1|BRNA (5'-R(*UP*UP*GP*CP*GP*UP*CP*GP*CP*GP*CP*CP*GP*GP*CP*GP*AP*AP*GP*UP*CP*GP*C)-3')Crystal structure of the protozoal cytoplasmic ribosomal decoding site in complex with 6'-hydroxysisomicin (P212121 form)X-ray diffraction2.62013-04-03
301LC4|1|A+ 1LC4|1|B5'-R(*UP*UP*GP*CP*GP*UP*CP*AP*CP*AP*CP*CP*GP*GP*UP*GP*AP*AP*GP*UP*CP*GP*C)-3'Crystal Structure of Tobramycin Bound to the Eubacterial 16S rRNA A SiteX-ray diffraction2.542003-04-08
314P20|1|A+ 4P20|1|B5'-R(*UP*UP*GP*CP*GP*UP*CP*AP*CP*AP*CP*CP*GP*GP*UP*GP*AP*AP*GP*UP*CP*GP*C)-3'synthetic constructSyntheticCrystal structures of the bacterial ribosomal decoding site complexed with amikacinX-ray diffraction2.72014-05-07
323WRU|1|A+ 3WRU|1|BRNA (5'-R(*UP*UP*GP*CP*GP*UP*CP*AP*CP*GP*CP*CP*GP*GP*CP*GP*AP*AP*GP*UP*CP*GP*C)-3')Crystal structure of the bacterial ribosomal decoding site in complex with synthetic aminoglycoside with F-HABA groupX-ray diffraction2.32014-11-05
334WCS|1|A+ 4WCS|1|BRNA (5'-R(*UP*UP*GP*CP*GP*UP*CP*(1MA)P*CP*GP*UP*CP*GP*AP*CP*GP*AP*AP*GP*UP*CP*GP*C)-3')Crystal structure of the bacterial A1408me1A-mutant ribosomal decoding site in the presence of gentamicinX-ray diffraction3.12015-09-09
344WCR|1|A+ 4WCR|1|BRNA (5'-R(*UP*UP*GP*CP*GP*UP*CP*(1MA)P*CP*GP*UP*CP*GP*AP*CP*GP*AP*AP*GP*UP*CP*GP*C)-3')Crystal structure of the bacterial A1408me1A-mutant ribosomal decoding site in complex with paromomycinX-ray diffraction3.52015-09-09
354K32|1|A+ 4K32|1|BRNA (5'-R(*UP*UP*GP*CP*GP*UP*CP*GP*UP*UP*CP*CP*GP*GP*AP*AP*AP*AP*GP*UP*CP*GP*C)-3')LeishmaniaEukaryaCrystal structure of geneticin bound to the leishmanial rRNA A-siteX-ray diffraction2.52013-07-31
364WCQ|1|A+ 4WCQ|1|BRNA (5'-R(*UP*UP*GP*CP*GP*UP*CP*(1MA)P*CP*GP*UP*CP*GP*AP*CP*GP*AP*AP*GP*UP*CP*GP*C)-3')Crystal structure of the bacterial A1408me1A-mutant ribosomal decoding site in complex with geneticinX-ray diffraction2.12015-09-09
374P3S|1|B+ 4P3S|1|A5'-R(*UP*UP*GP*CP*GP*UP*CP*CP*CP*GP*(5BU)P*CP*GP*AP*CP*GP*AP*AP*GP*UP*CP*GP*C)-3'synthetic constructSyntheticCrystal structure of the bacterial A1408C-mutant ribosomal decoding site in complex with geneticinX-ray diffraction2.32016-05-04
384P3U|1|B+ 4P3U|1|A5'-R(*UP*UP*GP*CP*GP*UP*CP*UP*CP*GP*(5BU)P*CP*GP*AP*CP*GP*AP*AP*GP*UP*CP*GP*C)-3'synthetic constructSyntheticCrystal structure of the bacterial A1408U-mutant ribosomal decoding site (C2 form 1)X-ray diffraction32016-05-04
394P3U|1|C+ 4P3U|1|D5'-R(*UP*UP*GP*CP*GP*UP*CP*UP*CP*GP*(5BU)P*CP*GP*AP*CP*GP*AP*AP*GP*UP*CP*GP*C)-3'synthetic constructSyntheticCrystal structure of the bacterial A1408U-mutant ribosomal decoding site (C2 form 1)X-ray diffraction32016-05-04

Release history

Release4.0
Date2016-07-25

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent
NR_4.0_33419.1NR_all_12314.14.0(1) 4PDQ|1|A+4PDQ|1|B(38) 2O3V|1|A+2O3V|1|B, 5BXK|1|C+5BXK|1|D, 2G5K|1|A+2G5K|1|B, 5BXK|1|A+5BXK|1|B, 2FQN|1|A+2FQN|1|B, 5BWS|1|C+5BWS|1|D, 2F4T|1|B+2F4T|1|A, 5BWS|1|A+5BWS|1|B, 2ESI|1|A+2ESI|1|B, 4WCS|1|A+4WCS|1|B, 1YRJ|1|A+1YRJ|1|B, 4WCR|1|A+4WCR|1|B, 1LC4|1|A+1LC4|1|B, 4WCQ|1|A+4WCQ|1|B, 4WCP|1|A+4WCP|1|B+4WCP|1|C, 4P43|1|B+4P43|1|A, 4P3U|1|C+4P3U|1|D, 4P3U|1|B+4P3U|1|A, 4P3T|1|A+4P3T|1|B, 4P3S|1|B+4P3S|1|A, 4P20|1|A+4P20|1|B, 4K32|1|A+4K32|1|B, 4K31|1|B+4K31|1|C, 4GPY|1|A+4GPY|1|B, 4GPX|1|A+4GPX|1|B, 4GPW|1|A+4GPW|1|B, 3WRU|1|A+3WRU|1|B, 3TD1|1|B+3TD1|1|A, 3TD0|1|B+3TD0|1|A, 3BNS|1|C+3BNS|1|D, 3BNS|1|A+3BNS|1|B, 3BNR|1|C+3BNR|1|D, 3BNR|1|A+3BNR|1|B, 3BNQ|1|C+3BNQ|1|D, 3BNQ|1|A+3BNQ|1|B, 2O3Y|1|A+2O3Y|1|B, 2O3X|1|A+2O3X|1|B, 2O3W|1|A+2O3W|1|B(0)
NR_4.0_33419.1NR_all_22565.14.0(4) 2FQN|1|A+2FQN|1|B, 2O3W|1|A+2O3W|1|B, 2O3Y|1|A+2O3Y|1|B, 2G5K|1|A+2G5K|1|B(35) 1LC4|1|A+1LC4|1|B, 4PDQ|1|A+4PDQ|1|B, 5BWS|1|C+5BWS|1|D, 4P3U|1|B+4P3U|1|A, 4P43|1|B+4P43|1|A, 4WCR|1|A+4WCR|1|B, 5BWS|1|A+5BWS|1|B, 4P3T|1|A+4P3T|1|B, 4WCQ|1|A+4WCQ|1|B, 4P3U|1|C+4P3U|1|D, 4WCS|1|A+4WCS|1|B, 4P3S|1|B+4P3S|1|A, 4WCP|1|A+4WCP|1|B+4WCP|1|C, 4P20|1|A+4P20|1|B, 4K32|1|A+4K32|1|B, 4K31|1|B+4K31|1|C, 4GPY|1|A+4GPY|1|B, 4GPX|1|A+4GPX|1|B, 4GPW|1|A+4GPW|1|B, 3WRU|1|A+3WRU|1|B, 3TD1|1|B+3TD1|1|A, 3TD0|1|B+3TD0|1|A, 3BNS|1|C+3BNS|1|D, 3BNS|1|A+3BNS|1|B, 3BNR|1|C+3BNR|1|D, 3BNR|1|A+3BNR|1|B, 3BNQ|1|C+3BNQ|1|D, 3BNQ|1|A+3BNQ|1|B, 2O3X|1|A+2O3X|1|B, 2O3V|1|A+2O3V|1|B, 2F4T|1|B+2F4T|1|A, 2ESI|1|A+2ESI|1|B, 1YRJ|1|A+1YRJ|1|B, 5BXK|1|C+5BXK|1|D, 5BXK|1|A+5BXK|1|B(0)
NR_4.0_33419.1NR_all_44960.14.0(15) 4P3S|1|B+4P3S|1|A, 1LC4|1|A+1LC4|1|B, 3TD1|1|B+3TD1|1|A, 4K32|1|A+4K32|1|B, 4WCR|1|A+4WCR|1|B, 2ESI|1|A+2ESI|1|B, 4GPW|1|A+4GPW|1|B, 4P20|1|A+4P20|1|B, 2F4T|1|B+2F4T|1|A, 4WCS|1|A+4WCS|1|B, 4GPX|1|A+4GPX|1|B, 4GPY|1|A+4GPY|1|B, 4WCQ|1|A+4WCQ|1|B, 1YRJ|1|A+1YRJ|1|B, 3WRU|1|A+3WRU|1|B(24) 4P3U|1|C+4P3U|1|D, 5BXK|1|A+5BXK|1|B, 2FQN|1|A+2FQN|1|B, 3BNQ|1|A+3BNQ|1|B, 3BNR|1|A+3BNR|1|B, 4P3T|1|A+4P3T|1|B, 3BNS|1|A+3BNS|1|B, 4P3U|1|B+4P3U|1|A, 5BWS|1|C+5BWS|1|D, 5BXK|1|C+5BXK|1|D, 2O3Y|1|A+2O3Y|1|B, 3BNQ|1|C+3BNQ|1|D, 4K31|1|B+4K31|1|C, 3BNR|1|C+3BNR|1|D, 5BWS|1|A+5BWS|1|B, 2O3X|1|A+2O3X|1|B, 3TD0|1|B+3TD0|1|A, 4WCP|1|A+4WCP|1|B+4WCP|1|C, 2O3W|1|A+2O3W|1|B, 3BNS|1|C+3BNS|1|D, 4PDQ|1|A+4PDQ|1|B, 2O3V|1|A+2O3V|1|B, 4P43|1|B+4P43|1|A, 2G5K|1|A+2G5K|1|B(0)
NR_4.0_33419.1NR_all_44997.14.0(1) 4K31|1|B+4K31|1|C(38) 3WRU|1|A+3WRU|1|B, 3TD1|1|B+3TD1|1|A, 3TD0|1|B+3TD0|1|A, 3BNS|1|C+3BNS|1|D, 3BNS|1|A+3BNS|1|B, 3BNR|1|C+3BNR|1|D, 3BNR|1|A+3BNR|1|B, 3BNQ|1|C+3BNQ|1|D, 3BNQ|1|A+3BNQ|1|B, 2O3Y|1|A+2O3Y|1|B, 2O3X|1|A+2O3X|1|B, 2O3W|1|A+2O3W|1|B, 2O3V|1|A+2O3V|1|B, 2G5K|1|A+2G5K|1|B, 5BXK|1|C+5BXK|1|D, 2FQN|1|A+2FQN|1|B, 5BXK|1|A+5BXK|1|B, 2F4T|1|B+2F4T|1|A, 5BWS|1|C+5BWS|1|D, 2ESI|1|A+2ESI|1|B, 5BWS|1|A+5BWS|1|B, 1YRJ|1|A+1YRJ|1|B, 4WCS|1|A+4WCS|1|B, 1LC4|1|A+1LC4|1|B, 4WCR|1|A+4WCR|1|B, 4WCQ|1|A+4WCQ|1|B, 4WCP|1|A+4WCP|1|B+4WCP|1|C, 4PDQ|1|A+4PDQ|1|B, 4P43|1|B+4P43|1|A, 4P3U|1|C+4P3U|1|D, 4P3U|1|B+4P3U|1|A, 4P3T|1|A+4P3T|1|B, 4P3S|1|B+4P3S|1|A, 4P20|1|A+4P20|1|B, 4K32|1|A+4K32|1|B, 4GPY|1|A+4GPY|1|B, 4GPX|1|A+4GPX|1|B, 4GPW|1|A+4GPW|1|B(0)
NR_4.0_33419.1NR_all_52106.14.0(5) 5BXK|1|C+5BXK|1|D, 5BWS|1|C+5BWS|1|D, 4WCP|1|A+4WCP|1|B+4WCP|1|C, 5BXK|1|A+5BXK|1|B, 5BWS|1|A+5BWS|1|B(34) 2O3V|1|A+2O3V|1|B, 2O3X|1|A+2O3X|1|B, 3BNR|1|A+3BNR|1|B, 3BNQ|1|A+3BNQ|1|B, 2G5K|1|A+2G5K|1|B, 2O3W|1|A+2O3W|1|B, 3BNQ|1|C+3BNQ|1|D, 2O3Y|1|A+2O3Y|1|B, 2FQN|1|A+2FQN|1|B, 2F4T|1|B+2F4T|1|A, 2ESI|1|A+2ESI|1|B, 1YRJ|1|A+1YRJ|1|B, 4WCS|1|A+4WCS|1|B, 1LC4|1|A+1LC4|1|B, 4WCR|1|A+4WCR|1|B, 4WCQ|1|A+4WCQ|1|B, 4PDQ|1|A+4PDQ|1|B, 4P43|1|B+4P43|1|A, 4P3U|1|C+4P3U|1|D, 4P3U|1|B+4P3U|1|A, 4P3T|1|A+4P3T|1|B, 4P3S|1|B+4P3S|1|A, 4P20|1|A+4P20|1|B, 4K32|1|A+4K32|1|B, 4K31|1|B+4K31|1|C, 4GPY|1|A+4GPY|1|B, 4GPX|1|A+4GPX|1|B, 4GPW|1|A+4GPW|1|B, 3WRU|1|A+3WRU|1|B, 3TD1|1|B+3TD1|1|A, 3TD0|1|B+3TD0|1|A, 3BNS|1|C+3BNS|1|D, 3BNS|1|A+3BNS|1|B, 3BNR|1|C+3BNR|1|D(0)
NR_4.0_33419.1NR_all_64374.14.0(1) 3TD0|1|B+3TD0|1|A(38) 2FQN|1|A+2FQN|1|B, 5BXK|1|A+5BXK|1|B, 2F4T|1|B+2F4T|1|A, 5BWS|1|C+5BWS|1|D, 2ESI|1|A+2ESI|1|B, 5BWS|1|A+5BWS|1|B, 1YRJ|1|A+1YRJ|1|B, 4WCS|1|A+4WCS|1|B, 1LC4|1|A+1LC4|1|B, 4WCR|1|A+4WCR|1|B, 4WCQ|1|A+4WCQ|1|B, 4WCP|1|A+4WCP|1|B+4WCP|1|C, 4PDQ|1|A+4PDQ|1|B, 4P43|1|B+4P43|1|A, 4P3U|1|C+4P3U|1|D, 4P3U|1|B+4P3U|1|A, 4P3T|1|A+4P3T|1|B, 4P3S|1|B+4P3S|1|A, 4P20|1|A+4P20|1|B, 4K32|1|A+4K32|1|B, 4K31|1|B+4K31|1|C, 4GPY|1|A+4GPY|1|B, 4GPX|1|A+4GPX|1|B, 4GPW|1|A+4GPW|1|B, 3WRU|1|A+3WRU|1|B, 3TD1|1|B+3TD1|1|A, 3BNS|1|C+3BNS|1|D, 3BNS|1|A+3BNS|1|B, 3BNR|1|C+3BNR|1|D, 3BNR|1|A+3BNR|1|B, 3BNQ|1|C+3BNQ|1|D, 3BNQ|1|A+3BNQ|1|B, 2O3Y|1|A+2O3Y|1|B, 2O3X|1|A+2O3X|1|B, 2O3W|1|A+2O3W|1|B, 2O3V|1|A+2O3V|1|B, 2G5K|1|A+2G5K|1|B, 5BXK|1|C+5BXK|1|D(0)
NR_4.0_33419.1NR_all_69829.14.0(1) 4P43|1|B+4P43|1|A(38) 4WCP|1|A+4WCP|1|B+4WCP|1|C, 4PDQ|1|A+4PDQ|1|B, 4P3U|1|C+4P3U|1|D, 4P3U|1|B+4P3U|1|A, 4P3T|1|A+4P3T|1|B, 4P3S|1|B+4P3S|1|A, 4P20|1|A+4P20|1|B, 4K32|1|A+4K32|1|B, 4K31|1|B+4K31|1|C, 4GPY|1|A+4GPY|1|B, 4GPX|1|A+4GPX|1|B, 4GPW|1|A+4GPW|1|B, 3WRU|1|A+3WRU|1|B, 3TD1|1|B+3TD1|1|A, 3TD0|1|B+3TD0|1|A, 3BNS|1|C+3BNS|1|D, 3BNS|1|A+3BNS|1|B, 3BNR|1|C+3BNR|1|D, 3BNR|1|A+3BNR|1|B, 3BNQ|1|C+3BNQ|1|D, 3BNQ|1|A+3BNQ|1|B, 2O3Y|1|A+2O3Y|1|B, 2O3X|1|A+2O3X|1|B, 2O3W|1|A+2O3W|1|B, 2O3V|1|A+2O3V|1|B, 5BXK|1|C+5BXK|1|D, 2G5K|1|A+2G5K|1|B, 5BXK|1|A+5BXK|1|B, 2FQN|1|A+2FQN|1|B, 5BWS|1|C+5BWS|1|D, 2F4T|1|B+2F4T|1|A, 5BWS|1|A+5BWS|1|B, 2ESI|1|A+2ESI|1|B, 4WCS|1|A+4WCS|1|B, 1YRJ|1|A+1YRJ|1|B, 4WCR|1|A+4WCR|1|B, 1LC4|1|A+1LC4|1|B, 4WCQ|1|A+4WCQ|1|B(0)
NR_4.0_33419.1NR_all_71337.14.0(1) 2O3V|1|A+2O3V|1|B(38) 4P3U|1|B+4P3U|1|A, 4P3T|1|A+4P3T|1|B, 4P3S|1|B+4P3S|1|A, 4P20|1|A+4P20|1|B, 4K32|1|A+4K32|1|B, 4K31|1|B+4K31|1|C, 4GPY|1|A+4GPY|1|B, 3WRU|1|A+3WRU|1|B, 4GPX|1|A+4GPX|1|B, 3TD1|1|B+3TD1|1|A, 4GPW|1|A+4GPW|1|B, 3TD0|1|B+3TD0|1|A, 3BNS|1|C+3BNS|1|D, 3BNS|1|A+3BNS|1|B, 3BNR|1|C+3BNR|1|D, 3BNR|1|A+3BNR|1|B, 3BNQ|1|C+3BNQ|1|D, 3BNQ|1|A+3BNQ|1|B, 2O3Y|1|A+2O3Y|1|B, 2O3X|1|A+2O3X|1|B, 2O3W|1|A+2O3W|1|B, 2G5K|1|A+2G5K|1|B, 2FQN|1|A+2FQN|1|B, 2F4T|1|B+2F4T|1|A, 5BXK|1|C+5BXK|1|D, 2ESI|1|A+2ESI|1|B, 5BXK|1|A+5BXK|1|B, 1YRJ|1|A+1YRJ|1|B, 5BWS|1|C+5BWS|1|D, 1LC4|1|A+1LC4|1|B, 5BWS|1|A+5BWS|1|B, 4WCS|1|A+4WCS|1|B, 4WCR|1|A+4WCR|1|B, 4WCQ|1|A+4WCQ|1|B, 4WCP|1|A+4WCP|1|B+4WCP|1|C, 4PDQ|1|A+4PDQ|1|B, 4P43|1|B+4P43|1|A, 4P3U|1|C+4P3U|1|D(0)
NR_4.0_33419.1NR_all_76825.14.0(1) 4P3U|1|C+4P3U|1|D(38) 4GPX|1|A+4GPX|1|B, 4GPW|1|A+4GPW|1|B, 3WRU|1|A+3WRU|1|B, 3TD1|1|B+3TD1|1|A, 3TD0|1|B+3TD0|1|A, 3BNS|1|C+3BNS|1|D, 3BNS|1|A+3BNS|1|B, 3BNR|1|C+3BNR|1|D, 3BNR|1|A+3BNR|1|B, 3BNQ|1|C+3BNQ|1|D, 3BNQ|1|A+3BNQ|1|B, 2O3Y|1|A+2O3Y|1|B, 2O3X|1|A+2O3X|1|B, 2O3W|1|A+2O3W|1|B, 2O3V|1|A+2O3V|1|B, 5BXK|1|C+5BXK|1|D, 2G5K|1|A+2G5K|1|B, 5BXK|1|A+5BXK|1|B, 2FQN|1|A+2FQN|1|B, 5BWS|1|C+5BWS|1|D, 2F4T|1|B+2F4T|1|A, 5BWS|1|A+5BWS|1|B, 2ESI|1|A+2ESI|1|B, 4WCS|1|A+4WCS|1|B, 1YRJ|1|A+1YRJ|1|B, 4WCR|1|A+4WCR|1|B, 1LC4|1|A+1LC4|1|B, 4WCQ|1|A+4WCQ|1|B, 4WCP|1|A+4WCP|1|B+4WCP|1|C, 4PDQ|1|A+4PDQ|1|B, 4P43|1|B+4P43|1|A, 4P3U|1|B+4P3U|1|A, 4P3T|1|A+4P3T|1|B, 4P3S|1|B+4P3S|1|A, 4P20|1|A+4P20|1|B, 4K32|1|A+4K32|1|B, 4K31|1|B+4K31|1|C, 4GPY|1|A+4GPY|1|B(0)
NR_4.0_33419.1NR_all_79557.14.0(6) 3BNR|1|A+3BNR|1|B, 3BNS|1|C+3BNS|1|D, 3BNQ|1|A+3BNQ|1|B, 3BNR|1|C+3BNR|1|D, 3BNQ|1|C+3BNQ|1|D, 3BNS|1|A+3BNS|1|B(33) 3WRU|1|A+3WRU|1|B, 3TD1|1|B+3TD1|1|A, 4GPX|1|A+4GPX|1|B, 4GPW|1|A+4GPW|1|B, 3TD0|1|B+3TD0|1|A, 2O3Y|1|A+2O3Y|1|B, 2O3X|1|A+2O3X|1|B, 2O3W|1|A+2O3W|1|B, 2O3V|1|A+2O3V|1|B, 2G5K|1|A+2G5K|1|B, 2FQN|1|A+2FQN|1|B, 2F4T|1|B+2F4T|1|A, 2ESI|1|A+2ESI|1|B, 1YRJ|1|A+1YRJ|1|B, 1LC4|1|A+1LC4|1|B, 5BXK|1|C+5BXK|1|D, 5BXK|1|A+5BXK|1|B, 5BWS|1|C+5BWS|1|D, 5BWS|1|A+5BWS|1|B, 4WCS|1|A+4WCS|1|B, 4WCR|1|A+4WCR|1|B, 4WCQ|1|A+4WCQ|1|B, 4WCP|1|A+4WCP|1|B+4WCP|1|C, 4PDQ|1|A+4PDQ|1|B, 4P43|1|B+4P43|1|A, 4P3U|1|C+4P3U|1|D, 4P3U|1|B+4P3U|1|A, 4P3T|1|A+4P3T|1|B, 4P3S|1|B+4P3S|1|A, 4P20|1|A+4P20|1|B, 4K32|1|A+4K32|1|B, 4K31|1|B+4K31|1|C, 4GPY|1|A+4GPY|1|B(0)
NR_4.0_33419.1NR_all_82261.14.0(1) 2O3X|1|A+2O3X|1|B(38) 3BNQ|1|C+3BNQ|1|D, 3BNQ|1|A+3BNQ|1|B, 2O3Y|1|A+2O3Y|1|B, 2O3W|1|A+2O3W|1|B, 2O3V|1|A+2O3V|1|B, 2G5K|1|A+2G5K|1|B, 5BXK|1|C+5BXK|1|D, 2FQN|1|A+2FQN|1|B, 5BXK|1|A+5BXK|1|B, 2F4T|1|B+2F4T|1|A, 5BWS|1|C+5BWS|1|D, 2ESI|1|A+2ESI|1|B, 5BWS|1|A+5BWS|1|B, 1YRJ|1|A+1YRJ|1|B, 4WCS|1|A+4WCS|1|B, 1LC4|1|A+1LC4|1|B, 4WCR|1|A+4WCR|1|B, 4WCQ|1|A+4WCQ|1|B, 4WCP|1|A+4WCP|1|B+4WCP|1|C, 4PDQ|1|A+4PDQ|1|B, 4P43|1|B+4P43|1|A, 4P3U|1|C+4P3U|1|D, 4P3U|1|B+4P3U|1|A, 4P3T|1|A+4P3T|1|B, 4P3S|1|B+4P3S|1|A, 4P20|1|A+4P20|1|B, 4K32|1|A+4K32|1|B, 4K31|1|B+4K31|1|C, 4GPY|1|A+4GPY|1|B, 4GPX|1|A+4GPX|1|B, 4GPW|1|A+4GPW|1|B, 3WRU|1|A+3WRU|1|B, 3TD1|1|B+3TD1|1|A, 3TD0|1|B+3TD0|1|A, 3BNS|1|C+3BNS|1|D, 3BNS|1|A+3BNS|1|B, 3BNR|1|C+3BNR|1|D, 3BNR|1|A+3BNR|1|B(0)
NR_4.0_33419.1NR_all_94747.14.0(1) 4P3T|1|A+4P3T|1|B(38) 2FQN|1|A+2FQN|1|B, 5BXK|1|A+5BXK|1|B, 2F4T|1|B+2F4T|1|A, 5BWS|1|C+5BWS|1|D, 2ESI|1|A+2ESI|1|B, 5BWS|1|A+5BWS|1|B, 1YRJ|1|A+1YRJ|1|B, 4WCS|1|A+4WCS|1|B, 4WCR|1|A+4WCR|1|B, 1LC4|1|A+1LC4|1|B, 4WCQ|1|A+4WCQ|1|B, 4WCP|1|A+4WCP|1|B+4WCP|1|C, 4PDQ|1|A+4PDQ|1|B, 4P43|1|B+4P43|1|A, 4P3U|1|C+4P3U|1|D, 4P3U|1|B+4P3U|1|A, 4P3S|1|B+4P3S|1|A, 4P20|1|A+4P20|1|B, 4K32|1|A+4K32|1|B, 4K31|1|B+4K31|1|C, 4GPY|1|A+4GPY|1|B, 4GPX|1|A+4GPX|1|B, 4GPW|1|A+4GPW|1|B, 3WRU|1|A+3WRU|1|B, 3TD1|1|B+3TD1|1|A, 3TD0|1|B+3TD0|1|A, 3BNS|1|C+3BNS|1|D, 3BNS|1|A+3BNS|1|B, 3BNR|1|C+3BNR|1|D, 3BNR|1|A+3BNR|1|B, 3BNQ|1|C+3BNQ|1|D, 3BNQ|1|A+3BNQ|1|B, 2O3Y|1|A+2O3Y|1|B, 2O3X|1|A+2O3X|1|B, 2O3W|1|A+2O3W|1|B, 2O3V|1|A+2O3V|1|B, 2G5K|1|A+2G5K|1|B, 5BXK|1|C+5BXK|1|D(0)
NR_4.0_33419.1NR_all_98252.14.0(1) 4P3U|1|B+4P3U|1|A(38) 4WCR|1|A+4WCR|1|B, 4WCQ|1|A+4WCQ|1|B, 4WCP|1|A+4WCP|1|B+4WCP|1|C, 4PDQ|1|A+4PDQ|1|B, 4P43|1|B+4P43|1|A, 4P3U|1|C+4P3U|1|D, 4P3T|1|A+4P3T|1|B, 4P3S|1|B+4P3S|1|A, 4P20|1|A+4P20|1|B, 4K32|1|A+4K32|1|B, 4K31|1|B+4K31|1|C, 4GPY|1|A+4GPY|1|B, 4GPX|1|A+4GPX|1|B, 4GPW|1|A+4GPW|1|B, 3WRU|1|A+3WRU|1|B, 3TD1|1|B+3TD1|1|A, 3TD0|1|B+3TD0|1|A, 3BNS|1|C+3BNS|1|D, 3BNS|1|A+3BNS|1|B, 3BNR|1|C+3BNR|1|D, 3BNR|1|A+3BNR|1|B, 3BNQ|1|C+3BNQ|1|D, 3BNQ|1|A+3BNQ|1|B, 2O3Y|1|A+2O3Y|1|B, 2O3X|1|A+2O3X|1|B, 2O3W|1|A+2O3W|1|B, 2O3V|1|A+2O3V|1|B, 2F4T|1|B+2F4T|1|A, 2G5K|1|A+2G5K|1|B, 5BXK|1|C+5BXK|1|D, 2ESI|1|A+2ESI|1|B, 2FQN|1|A+2FQN|1|B, 5BXK|1|A+5BXK|1|B, 1YRJ|1|A+1YRJ|1|B, 5BWS|1|C+5BWS|1|D, 1LC4|1|A+1LC4|1|B, 5BWS|1|A+5BWS|1|B, 4WCS|1|A+4WCS|1|B(0)

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Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLengthNAKB_NA_annotationNAKB_protein_annotation
13BNQ|1|A+3BNQ|1|BTitle: Crystal Structure of the Homo sapiens Mitochondrial Ribosomal Decoding Site in the Presence of SrCl2 (A1555G mutant, Br-derivative)X-RAY DIFFRACTION222
23BNR|1|A+3BNR|1|BTitle: Crystal Structure of the Homo sapiens Mitochondrial Ribosomal Decoding Site in the presence of nonspecifically bound paromomycin (A1555G mutant, Br-derivative)X-RAY DIFFRACTION2.122
33BNS|1|A+3BNS|1|BTitle: Crystal Structure of the Homo sapiens Mitochondrial Ribosomal Decoding Site (A1555G mutant, Br-derivative)X-RAY DIFFRACTION1.922
43BNQ|1|C+3BNQ|1|DTitle: Crystal Structure of the Homo sapiens Mitochondrial Ribosomal Decoding Site in the Presence of SrCl2 (A1555G mutant, Br-derivative)X-RAY DIFFRACTION222
53BNR|1|C+3BNR|1|DTitle: Crystal Structure of the Homo sapiens Mitochondrial Ribosomal Decoding Site in the presence of nonspecifically bound paromomycin (A1555G mutant, Br-derivative)X-RAY DIFFRACTION2.122
63BNS|1|C+3BNS|1|DTitle: Crystal Structure of the Homo sapiens Mitochondrial Ribosomal Decoding Site (A1555G mutant, Br-derivative)X-RAY DIFFRACTION1.922
74P3U|1|B+4P3U|1|ATitle: Crystal structure of the bacterial A1408U-mutant ribosomal decoding site (C2 form 1)X-RAY DIFFRACTION321
84P3U|1|C+4P3U|1|DTitle: Crystal structure of the bacterial A1408U-mutant ribosomal decoding site (C2 form 1)X-RAY DIFFRACTION321
94P43|1|B+4P43|1|ATitle: Crystal structure of the bacterial A1408U-mutant ribosomal decoding site (C2 form 2)X-RAY DIFFRACTION223
103TD0|1|B+3TD0|1|ATitle: Crystal structure of the bacterial A1408G-mutant and the protozoa cytoplasmic ribosomal decoding siteX-RAY DIFFRACTION1.622
114GPW|1|A+4GPW|1|BTitle: Crystal structure of the protozoal cytoplasmic ribosomal decoding site in complex with 6'-hydroxysisomicin (P21212 form)X-RAY DIFFRACTION322
124P3S|1|B+4P3S|1|ATitle: Crystal structure of the bacterial A1408C-mutant ribosomal decoding site in complex with geneticinX-RAY DIFFRACTION2.321
134GPX|1|A+4GPX|1|BTitle: Crystal structure of the protozoal cytoplasmic ribosomal decoding site in complex with 6'-hydroxysisomicin (P212121 form)X-RAY DIFFRACTION2.621
143TD1|1|B+3TD1|1|ATitle: Crystal structure of the bacterial A1408G-mutant and the protozoa cytoplasmic ribosomal decoding site in complex with geneticinX-RAY DIFFRACTION2.122
154WCS|1|A+4WCS|1|BTitle: Crystal structure of the bacterial A1408me1A-mutant ribosomal decoding site in the presence of gentamicinX-RAY DIFFRACTION3.121
162O3X|1|A+2O3X|1|BTitle: Crystal Structure of the Prokaryotic Ribosomal Decoding Site Complexed with Paromamine Derivative NB30X-RAY DIFFRACTION2.921
174WCR|1|A+4WCR|1|BTitle: Crystal structure of the bacterial A1408me1A-mutant ribosomal decoding site in complex with paromomycinX-RAY DIFFRACTION3.521
184WCQ|1|A+4WCQ|1|BTitle: Crystal structure of the bacterial A1408me1A-mutant ribosomal decoding site in complex with geneticinX-RAY DIFFRACTION2.121
192F4T|1|B+2F4T|1|ATitle: Asite RNA + designer antibioticX-RAY DIFFRACTION323
204GPY|1|A+4GPY|1|BTitle: Crystal structure of the bacterial ribosomal decoding site in complex with 6'-hydroxysisomicinX-RAY DIFFRACTION2.822
214P20|1|A+4P20|1|BTitle: Crystal structures of the bacterial ribosomal decoding site complexed with amikacinX-RAY DIFFRACTION2.721
222ESI|1|A+2ESI|1|BTitle: Complex between Kanamycin A and the 16S-Rrna A Site.X-RAY DIFFRACTION323
231LC4|1|A+1LC4|1|BTitle: Crystal Structure of Tobramycin Bound to the Eubacterial 16S rRNA A SiteX-RAY DIFFRACTION2.5421
243WRU|1|A+3WRU|1|BTitle: Crystal structure of the bacterial ribosomal decoding site in complex with synthetic aminoglycoside with F-HABA groupX-RAY DIFFRACTION2.321
251YRJ|1|A+1YRJ|1|BTitle: Crystal Structure of Apramycin bound to a Ribosomal RNA A site oligonucleotideX-RAY DIFFRACTION2.723
265BWS|1|A+5BWS|1|BTitle: Crystal structure of the bacterial ribosomal decoding site in complex with 4'-deoxy-4'-fluoro neamine analog (axial 4'-F)X-RAY DIFFRACTION2.623
275BXK|1|A+5BXK|1|BTitle: Crystal structure of the bacterial ribosomal decoding site in complex with 4'-deoxy-4'-fluoro neamine analog (equatorial 4'-F)X-RAY DIFFRACTION3.122
284P3T|1|A+4P3T|1|BTitle: Crystal structure of the bacterial A1408C-mutant ribosomal decoding siteX-RAY DIFFRACTION1.622
295BXK|1|C+5BXK|1|DTitle: Crystal structure of the bacterial ribosomal decoding site in complex with 4'-deoxy-4'-fluoro neamine analog (equatorial 4'-F)X-RAY DIFFRACTION3.123
305BWS|1|C+5BWS|1|DTitle: Crystal structure of the bacterial ribosomal decoding site in complex with 4'-deoxy-4'-fluoro neamine analog (axial 4'-F)X-RAY DIFFRACTION2.623
314WCP|1|A+4WCP|1|B+4WCP|1|CTitle: Crystal structure of the bacterial A1408me1A-mutant ribosomal decoding siteX-RAY DIFFRACTION2.422
324PDQ|1|A+4PDQ|1|BTitle: Crystal structure of the bacterial ribosomal decoding site in complex with 4'-deoxy-4'-fluoro neomycin analogX-RAY DIFFRACTION323
332O3V|1|A+2O3V|1|BTitle: Crystal Structure of the Homo sapiens Cytoplasmic Ribosomal Decoding Site complexed with paromamine derivative NB33X-RAY DIFFRACTION2.822
342FQN|1|A+2FQN|1|BTitle: Crystal structure of the Homo sapiens cytoplasmic ribosomal decoding A siteX-RAY DIFFRACTION2.322
352O3Y|1|A+2O3Y|1|BTitle: Crystal Structure of the Homo sapiens Cytoplasmic Ribosomal Decoding Site in Presence of Paromamine Derivative NB30X-RAY DIFFRACTION2.722
362O3W|1|A+2O3W|1|BTitle: Crystal Structure of the Homo sapiens Cytoplasmic Ribosomal Decoding Site in presence of paromomycinX-RAY DIFFRACTION2.822
372G5K|1|A+2G5K|1|BTitle: Crystal Structure of the Homo sapiens Cytoplasmic Ribosomal Decoding Site complexed with ApramycinX-RAY DIFFRACTION2.822
384K31|1|B+4K31|1|CTitle: Crystal structure of apramycin bound to the leishmanial rRNA A-siteX-RAY DIFFRACTION1.4122
394K32|1|A+4K32|1|BTitle: Crystal structure of geneticin bound to the leishmanial rRNA A-siteX-RAY DIFFRACTION2.521

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