Equivalence class NR_4.0_25638.1 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 4K4W|1|F+ 4K4W|1|G (rep) | RNA (5'-R(P*GP*GP*GP*AP*GP*AP*UP*GP*AP*AP*AP*GP*UP*CP*UP*CP*CP*AP*GP*GP*UP*CP*UP*CP*UP*CP*UP*CP*GP*UP*CP*GP*AP*AP*A)-3'), RNA (5'-R(*UP*GP*UP*UP*CP*GP*AP*CP*GP*AP*GP*AP*GP*AP*GP*AP*CP*C)-3') | Poliovirus polymerase elongation complex (r5+2_form) | X-ray diffraction | 2.69 | 2013-05-22 | ||||
| 2 | 4K4W|1|B+ 4K4W|1|C | RNA (5'-R(P*GP*GP*GP*AP*GP*AP*UP*GP*AP*AP*AP*GP*UP*CP*UP*CP*CP*AP*GP*GP*UP*CP*UP*CP*UP*CP*UP*CP*GP*UP*CP*GP*AP*AP*A)-3'), RNA (5'-R(*UP*GP*UP*UP*CP*GP*AP*CP*GP*AP*GP*AP*GP*AP*GP*AP*CP*C)-3') | Poliovirus polymerase elongation complex (r5+2_form) | X-ray diffraction | 2.69 | 2013-05-22 |
Release history
| Release | 6.0 |
|---|---|
| Date | 2017-04-04 |
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
|---|---|---|---|---|---|
| NR_4.0_25638.1 | NR_4.0_62033.1 | 6.0 | (2) 4K4W|1|F+4K4W|1|G, 4K4W|1|B+4K4W|1|C | (0) | (3) 5F8N|1|B+5F8N|1|C, 5F8L|1|B+5F8L|1|C, 5F8M|1|B+5F8M|1|C |
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
|---|---|---|---|---|---|
| NR_4.0_25638.1 | NR_4.0_83076.1 | 7.0 | (2) 4K4W|1|F+4K4W|1|G, 4K4W|1|B+4K4W|1|C | (0) | (3) 5F8N|1|B+5F8N|1|C, 5F8M|1|B+5F8M|1|C, 5F8L|1|B+5F8L|1|C |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length | NAKB_NA_annotation | NAKB_protein_annotation |
|---|---|---|---|---|---|---|---|
| 1 | 4K4W|1|B+4K4W|1|C | Title: Poliovirus polymerase elongation complex (r5+2_form) | X-RAY DIFFRACTION | 2.69 | 21 | ||
| 2 | 4K4W|1|F+4K4W|1|G | Title: Poliovirus polymerase elongation complex (r5+2_form) | X-RAY DIFFRACTION | 2.69 | 21 |
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