Equivalence class NR_4.0_18591.1 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 3OX0|1|A (rep) | Glycine riboswitch | Domain II of glycine riboswitch | RF00504 | Crystal structure of glycine riboswitch, unbound state | X-ray diffraction | 3.05 | 2010-12-29 |
Release history
| Release | 6.0 |
|---|---|
| Date | 2017-04-04 |
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
|---|---|---|---|---|---|
| NR_4.0_18591.1 | NR_4.0_50989.1 | 6.0 | (1) 3OX0|1|A | (0) | (17) 3OWI|1|A, 3OWI|1|B, 3OWW|1|A, 3OWW|1|B, 3OWZ|1|A, 3OWZ|1|B, 3OX0|1|B, 3OXB|1|A, 3OXB|1|B, 3OXD|1|A, 3OXD|1|B, 3OXE|1|A, 3OXE|1|B, 3OXJ|1|A, 3OXJ|1|B, 3OXM|1|A, 3OXM|1|B |
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
|---|---|---|---|---|---|
| NR_4.0_18591.1 | NR_4.0_75486.1 | 7.0 | (1) 3OX0|1|A | (0) | (17) 3OWI|1|A, 3OWI|1|B, 3OWW|1|A, 3OWW|1|B, 3OWZ|1|A, 3OWZ|1|B, 3OX0|1|B, 3OXB|1|A, 3OXB|1|B, 3OXD|1|A, 3OXD|1|B, 3OXE|1|A, 3OXE|1|B, 3OXJ|1|A, 3OXJ|1|B, 3OXM|1|A, 3OXM|1|B |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length | NAKB_NA_annotation | NAKB_protein_annotation |
|---|---|---|---|---|---|---|---|
| 1 | 3OX0|1|A | Title: Crystal structure of glycine riboswitch, unbound state | X-RAY DIFFRACTION | 3.05 | 86 |
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