Equivalence class NR_4.0_18409.1 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 3BNN|1|C+ 3BNN|1|D (rep) | A site of human ribosome | Crystal Structure of the Homo sapiens Mitochondrial Ribosomal Decoding Site | X-ray diffraction | 2 | 2008-06-24 | ||||
| 2 | 3BNN|1|A+ 3BNN|1|B | A site of human ribosome | Crystal Structure of the Homo sapiens Mitochondrial Ribosomal Decoding Site | X-ray diffraction | 2 | 2008-06-24 | ||||
| 3 | 3BNO|1|A+ 3BNO|1|B | A site of human mitochondrial ribosome | Crystal Structure of the Homo sapiens Mitochondrial Ribosomal Decoding Site (Br-derivative) | X-ray diffraction | 2.35 | 2008-06-24 | ||||
| 4 | 3BNO|1|C+ 3BNO|1|D | A site of human mitochondrial ribosome | Crystal Structure of the Homo sapiens Mitochondrial Ribosomal Decoding Site (Br-derivative) | X-ray diffraction | 2.35 | 2008-06-24 |
Release history
| Release | 5.0 |
|---|---|
| Date | 2016-07-25 |
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
|---|---|---|---|---|---|
| NR_4.0_18409.1 | NR_all_78117.1 | 5.0 | (4) 3BNO|1|A+3BNO|1|B, 3BNN|1|C+3BNN|1|D, 3BNN|1|A+3BNN|1|B, 3BNO|1|C+3BNO|1|D | (0) | (5) 2F4S|1|A+2F4S|1|B, 2PWT|1|A+2PWT|1|B, 4F8V|1|A+4F8V|1|B, 2F4U|1|A+2F4U|1|B, 3S4P|1|A+3S4P|1|B |
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
|---|---|---|---|---|---|
| NR_4.0_18409.1 | NR_4.0_07538.1 | 6.0 | (2) 3BNN|1|C+3BNN|1|D, 3BNN|1|A+3BNN|1|B | (2) 3BNO|1|C+3BNO|1|D, 3BNO|1|A+3BNO|1|B | (1) 3BNP|1|A+3BNP|1|B |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length | NAKB_NA_annotation | NAKB_protein_annotation |
|---|---|---|---|---|---|---|---|
| 1 | 3BNO|1|C+3BNO|1|D | Title: Crystal Structure of the Homo sapiens Mitochondrial Ribosomal Decoding Site (Br-derivative) | X-RAY DIFFRACTION | 2.35 | 20 | ||
| 2 | 3BNN|1|C+3BNN|1|D | Title: Crystal Structure of the Homo sapiens Mitochondrial Ribosomal Decoding Site | X-RAY DIFFRACTION | 2 | 21 | ||
| 3 | 3BNO|1|A+3BNO|1|B | Title: Crystal Structure of the Homo sapiens Mitochondrial Ribosomal Decoding Site (Br-derivative) | X-RAY DIFFRACTION | 2.35 | 20 | ||
| 4 | 3BNN|1|A+3BNN|1|B | Title: Crystal Structure of the Homo sapiens Mitochondrial Ribosomal Decoding Site | X-RAY DIFFRACTION | 2 | 21 |
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