Equivalence class NR_4.0_14519.1 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 4K4Z|1|N+ 4K4Z|1|O+ 4K4Z|1|P (rep) | RNA (5'-R(*AP*AP*GP*UP*CP*UP*CP*CP*AP*GP*GP*UP*CP*UP*CP*UP*CP*GP*UP*CP*GP*AP*AP*A)-3'), RNA (5'-R(*UP*GP*UP*UP*CP*GP*AP*CP*GP*AP*GP*AP*GP*A)-3'), RNA (5'-R(P*GP*GP*GP*AP*GP*AP*UP*GP*A)-3') | Coxsackievirus B3 polymerase elongation complex (r2_Mg_form) | X-ray diffraction | 2.17 | 2013-05-22 | ||||
| 2 | 4K4Z|1|J+ 4K4Z|1|K+ 4K4Z|1|L | RNA (5'-R(*AP*AP*GP*UP*CP*UP*CP*CP*AP*GP*GP*UP*CP*UP*CP*UP*CP*GP*UP*CP*GP*AP*AP*A)-3'), RNA (5'-R(*UP*GP*UP*UP*CP*GP*AP*CP*GP*AP*GP*AP*GP*A)-3'), RNA (5'-R(P*GP*GP*GP*AP*GP*AP*UP*GP*A)-3') | Coxsackievirus B3 polymerase elongation complex (r2_Mg_form) | X-ray diffraction | 2.17 | 2013-05-22 | ||||
| 3 | 4K4Z|1|F+ 4K4Z|1|G+ 4K4Z|1|H | RNA (5'-R(*AP*AP*GP*UP*CP*UP*CP*CP*AP*GP*GP*UP*CP*UP*CP*UP*CP*GP*UP*CP*GP*AP*AP*A)-3'), RNA (5'-R(*UP*GP*UP*UP*CP*GP*AP*CP*GP*AP*GP*AP*GP*A)-3'), RNA (5'-R(P*GP*GP*GP*AP*GP*AP*UP*GP*A)-3') | Coxsackievirus B3 polymerase elongation complex (r2_Mg_form) | X-ray diffraction | 2.17 | 2013-05-22 | ||||
| 4 | 4K4Z|1|B+ 4K4Z|1|C+ 4K4Z|1|D | RNA (5'-R(*AP*AP*GP*UP*CP*UP*CP*CP*AP*GP*GP*UP*CP*UP*CP*UP*CP*GP*UP*CP*GP*AP*AP*A)-3'), RNA (5'-R(*UP*GP*UP*UP*CP*GP*AP*CP*GP*AP*GP*AP*GP*A)-3'), RNA (5'-R(P*GP*GP*GP*AP*GP*AP*UP*GP*A)-3') | Coxsackievirus B3 polymerase elongation complex (r2_Mg_form) | X-ray diffraction | 2.17 | 2013-05-22 |
Release history
| Release | 6.0 |
|---|---|
| Date | 2017-04-04 |
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
|---|---|---|---|---|---|
| NR_4.0_14519.1 | NR_4.0_09196.3 | 6.0 | (4) 4K4Z|1|J+4K4Z|1|K+4K4Z|1|L, 4K4Z|1|B+4K4Z|1|C+4K4Z|1|D, 4K4Z|1|N+4K4Z|1|O+4K4Z|1|P, 4K4Z|1|F+4K4Z|1|G+4K4Z|1|H | (0) | (4) 4K4X|1|B+4K4X|1|C+4K4X|1|D, 4K4X|1|N+4K4X|1|O+4K4X|1|P, 4K4X|1|J+4K4X|1|K+4K4X|1|L, 4K4X|1|F+4K4X|1|G+4K4X|1|H |
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
|---|---|---|---|---|---|
| NR_4.0_14519.1 | NR_4.0_81309.1 | 7.0 | (4) 4K4Z|1|J+4K4Z|1|K+4K4Z|1|L, 4K4Z|1|F+4K4Z|1|G+4K4Z|1|H, 4K4Z|1|B+4K4Z|1|C+4K4Z|1|D, 4K4Z|1|N+4K4Z|1|O+4K4Z|1|P | (0) | (4) 4K4X|1|N+4K4X|1|O+4K4X|1|P, 4K4X|1|J+4K4X|1|K+4K4X|1|L, 4K4X|1|F+4K4X|1|G+4K4X|1|H, 4K4X|1|B+4K4X|1|C+4K4X|1|D |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length | NAKB_NA_annotation | NAKB_protein_annotation |
|---|---|---|---|---|---|---|---|
| 1 | 4K4Z|1|B+4K4Z|1|C+4K4Z|1|D | Title: Coxsackievirus B3 polymerase elongation complex (r2_Mg_form) | X-RAY DIFFRACTION | 2.17 | 17 | ||
| 2 | 4K4Z|1|J+4K4Z|1|K+4K4Z|1|L | Title: Coxsackievirus B3 polymerase elongation complex (r2_Mg_form) | X-RAY DIFFRACTION | 2.17 | 18 | ||
| 3 | 4K4Z|1|F+4K4Z|1|G+4K4Z|1|H | Title: Coxsackievirus B3 polymerase elongation complex (r2_Mg_form) | X-RAY DIFFRACTION | 2.17 | 18 | ||
| 4 | 4K4Z|1|N+4K4Z|1|O+4K4Z|1|P | Title: Coxsackievirus B3 polymerase elongation complex (r2_Mg_form) | X-RAY DIFFRACTION | 2.17 | 17 |
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