Equivalence class NR_4.0_12625.1 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 3F4H|1|Y+ 3F4H|1|X (rep) | FMN riboswitch | Crystal structure of the FMN riboswitch bound to roseoflavin | X-ray diffraction | 3 | 2009-01-27 | ||||
| 2 | 3F4E|1|Y+ 3F4E|1|X | FMN riboswitch | Crystal structure of the FMN riboswitch bound to FMN, split RNA. | X-ray diffraction | 3.05 | 2009-01-27 | ||||
| 3 | 2YIF|1|Z+ 2YIF|1|X | FMN RIBOSWITCH | Fusobacterium nucleatum | Bacteria | Crystal structure of a F. nucleatum FMN riboswitch - Free state | X-ray diffraction | 3.3 | 2011-08-31 |
Release history
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
|---|---|---|---|---|---|
| NR_4.0_12625.1 | NR_4.0_12625.1 | 8.0 | (3) 2YIF|1|Z+2YIF|1|X, 3F4E|1|Y+3F4E|1|X, 3F4H|1|Y+3F4H|1|X | (0) | (0) |
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
|---|---|---|---|---|---|
| NR_4.0_12625.1 | NR_4.0_66617.1 | 9.15 | (3) 2YIF|1|Z+2YIF|1|X, 3F4H|1|Y+3F4H|1|X, 3F4E|1|Y+3F4E|1|X | (0) | (4) 6DN2|1|Y+6DN2|1|X, 6DN1|1|Z+6DN1|1|X, 6BFB|1|Y+6BFB|1|X, 6DN3|1|Y+6DN3|1|X |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length | NAKB_NA_annotation | NAKB_protein_annotation |
|---|---|---|---|---|---|---|---|
| 1 | 2YIF|1|Z+2YIF|1|X | Title: Crystal structure of a F. nucleatum FMN riboswitch - Free state | X-RAY DIFFRACTION | 3.3 | 56 | ||
| 2 | 3F4E|1|Y+3F4E|1|X | Title: Crystal structure of the FMN riboswitch bound to FMN, split RNA. | X-RAY DIFFRACTION | 3.05 | 56 | ||
| 3 | 3F4H|1|Y+3F4H|1|X | Title: Crystal structure of the FMN riboswitch bound to roseoflavin | X-RAY DIFFRACTION | 3 | 56 |
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