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Equivalence class NR_4.0_04111.1 Obsolete

#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. ÅDate
12NZ4|1|Q (rep)glmS glucosamine-6-phosphate activated ribozymeGlmS ribozyme, substrate strand RNA 13-merRF00234Structural investigation of the GlmS ribozyme bound to its catalytic cofactorX-ray diffraction2.52007-01-16
23G9C|1|SglmS glucosamine-6-phosphate activated ribozymeGLMS RIBOZYME, RNA (5'-R(*GP*CP*GP*CP*CP*AP*GP*AP*AP*CP*U)-3')synthetic constructSyntheticRF00234Crystal structure of the product Bacillus anthracis glmS ribozymeX-ray diffraction2.92009-11-03
33G96|1|QglmS glucosamine-6-phosphate activated ribozymeGLMS RIBOZYME, RNA (5'-R(*AP*(A2M)P*GP*CP*GP*CP*CP*AP*GP*AP*AP*CP*U)-3')synthetic constructSyntheticRF00234Crystal structure of the Bacillus anthracis glmS ribozyme bound to MaN6PX-ray diffraction3.012009-11-03
42NZ4|1|RglmS glucosamine-6-phosphate activated ribozymeGlmS ribozyme, substrate strand RNA 13-merRF00234Structural investigation of the GlmS ribozyme bound to its catalytic cofactorX-ray diffraction2.52007-01-16
53L3C|1|RglmS glucosamine-6-phosphate activated ribozymeGLMS RIBOZYME, RNA (5'-R(*AP*(A2M)*GP*CP*GP*CP*CP*AP*GP*AP*AP*CP*U)-3')RF00234Crystal structure of the Bacillus anthracis glmS ribozyme bound to Glc6PX-ray diffraction2.852009-12-29
63L3C|1|QglmS glucosamine-6-phosphate activated ribozymeGLMS RIBOZYME, RNA (5'-R(*AP*(A2M)*GP*CP*GP*CP*CP*AP*GP*AP*AP*CP*U)-3')RF00234Crystal structure of the Bacillus anthracis glmS ribozyme bound to Glc6PX-ray diffraction2.852009-12-29
73G96|1|RglmS glucosamine-6-phosphate activated ribozymeGLMS RIBOZYME, RNA (5'-R(*AP*(A2M)P*GP*CP*GP*CP*CP*AP*GP*AP*AP*CP*U)-3')synthetic constructSyntheticRF00234Crystal structure of the Bacillus anthracis glmS ribozyme bound to MaN6PX-ray diffraction3.012009-11-03
83G8T|1|PglmS glucosamine-6-phosphate activated ribozymeglmS glucosamine-6-phosphate activated ribozyme, RNA (5'-R(*AP*(A2M)P*GP*CP*GP*CP*CP*AP*GP*AP*AP*CP*U)-3')synthetic constructSyntheticRF00234Crystal structure of the G33A mutant Bacillus anthracis glmS ribozyme bound to GlcN6PX-ray diffraction32009-11-03
93G8S|1|RglmS glucosamine-6-phosphate activated ribozymeGLMS RIBOZYME, RNA (5'-R(*AP*(A2M)P*GP*CP*GP*CP*CP*AP*GP*AP*AP*CP*U)-3')RF00234Crystal structure of the pre-cleaved Bacillus anthracis glmS ribozymeX-ray diffraction3.12009-11-03
102NZ4|1|PglmS glucosamine-6-phosphate activated ribozymeGlmS ribozyme, substrate strand RNA 13-merRF00234Structural investigation of the GlmS ribozyme bound to its catalytic cofactorX-ray diffraction2.52007-01-16
113G8T|1|RglmS glucosamine-6-phosphate activated ribozymeglmS glucosamine-6-phosphate activated ribozyme, RNA (5'-R(*AP*(A2M)P*GP*CP*GP*CP*CP*AP*GP*AP*AP*CP*U)-3')synthetic constructSyntheticRF00234Crystal structure of the G33A mutant Bacillus anthracis glmS ribozyme bound to GlcN6PX-ray diffraction32009-11-03
123G9C|1|QglmS glucosamine-6-phosphate activated ribozymeGLMS RIBOZYME, RNA (5'-R(*GP*CP*GP*CP*CP*AP*GP*AP*AP*CP*U)-3')synthetic constructSyntheticRF00234Crystal structure of the product Bacillus anthracis glmS ribozymeX-ray diffraction2.92009-11-03
133G96|1|SglmS glucosamine-6-phosphate activated ribozymeGLMS RIBOZYME, RNA (5'-R(*AP*(A2M)P*GP*CP*GP*CP*CP*AP*GP*AP*AP*CP*U)-3')synthetic constructSyntheticRF00234Crystal structure of the Bacillus anthracis glmS ribozyme bound to MaN6PX-ray diffraction3.012009-11-03
143G96|1|PglmS glucosamine-6-phosphate activated ribozymeGLMS RIBOZYME, RNA (5'-R(*AP*(A2M)P*GP*CP*GP*CP*CP*AP*GP*AP*AP*CP*U)-3')synthetic constructSyntheticRF00234Crystal structure of the Bacillus anthracis glmS ribozyme bound to MaN6PX-ray diffraction3.012009-11-03
153G8T|1|QglmS glucosamine-6-phosphate activated ribozymeglmS glucosamine-6-phosphate activated ribozyme, RNA (5'-R(*AP*(A2M)P*GP*CP*GP*CP*CP*AP*GP*AP*AP*CP*U)-3')synthetic constructSyntheticRF00234Crystal structure of the G33A mutant Bacillus anthracis glmS ribozyme bound to GlcN6PX-ray diffraction32009-11-03
163L3C|1|PglmS glucosamine-6-phosphate activated ribozymeGLMS RIBOZYME, RNA (5'-R(*AP*(A2M)*GP*CP*GP*CP*CP*AP*GP*AP*AP*CP*U)-3')RF00234Crystal structure of the Bacillus anthracis glmS ribozyme bound to Glc6PX-ray diffraction2.852009-12-29
173G8S|1|QglmS glucosamine-6-phosphate activated ribozymeGLMS RIBOZYME, RNA (5'-R(*AP*(A2M)P*GP*CP*GP*CP*CP*AP*GP*AP*AP*CP*U)-3')RF00234Crystal structure of the pre-cleaved Bacillus anthracis glmS ribozymeX-ray diffraction3.12009-11-03
182NZ4|1|SglmS glucosamine-6-phosphate activated ribozymeGlmS ribozyme, substrate strand RNA 13-merRF00234Structural investigation of the GlmS ribozyme bound to its catalytic cofactorX-ray diffraction2.52007-01-16
193G9C|1|PglmS glucosamine-6-phosphate activated ribozymeGLMS RIBOZYME, RNA (5'-R(*GP*CP*GP*CP*CP*AP*GP*AP*AP*CP*U)-3')synthetic constructSyntheticRF00234Crystal structure of the product Bacillus anthracis glmS ribozymeX-ray diffraction2.92009-11-03
203G8T|1|SglmS glucosamine-6-phosphate activated ribozymeglmS glucosamine-6-phosphate activated ribozyme, RNA (5'-R(*AP*(A2M)P*GP*CP*GP*CP*CP*AP*GP*AP*AP*CP*U)-3')synthetic constructSyntheticRF00234Crystal structure of the G33A mutant Bacillus anthracis glmS ribozyme bound to GlcN6PX-ray diffraction32009-11-03
213L3C|1|SglmS glucosamine-6-phosphate activated ribozymeGLMS RIBOZYME, RNA (5'-R(*AP*(A2M)*GP*CP*GP*CP*CP*AP*GP*AP*AP*CP*U)-3')RF00234Crystal structure of the Bacillus anthracis glmS ribozyme bound to Glc6PX-ray diffraction2.852009-12-29
223G8S|1|PglmS glucosamine-6-phosphate activated ribozymeGLMS RIBOZYME, RNA (5'-R(*AP*(A2M)P*GP*CP*GP*CP*CP*AP*GP*AP*AP*CP*U)-3')RF00234Crystal structure of the pre-cleaved Bacillus anthracis glmS ribozymeX-ray diffraction3.12009-11-03
233G9C|1|RglmS glucosamine-6-phosphate activated ribozymeGLMS RIBOZYME, RNA (5'-R(*GP*CP*GP*CP*CP*AP*GP*AP*AP*CP*U)-3')synthetic constructSyntheticRF00234Crystal structure of the product Bacillus anthracis glmS ribozymeX-ray diffraction2.92009-11-03
243G8S|1|SglmS glucosamine-6-phosphate activated ribozymeGLMS RIBOZYME, RNA (5'-R(*AP*(A2M)P*GP*CP*GP*CP*CP*AP*GP*AP*AP*CP*U)-3')RF00234Crystal structure of the pre-cleaved Bacillus anthracis glmS ribozymeX-ray diffraction3.12009-11-03

Release history

Release2.03.04.05.0
Date2014-12-052016-07-252016-07-252016-07-25

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child
NR_4.0_04111.1NR_4.0_48442.16.0(8) 3G8T|1|Q, 3G8T|1|R, 2NZ4|1|P, 3G8T|1|S, 2NZ4|1|Q, 2NZ4|1|R, 2NZ4|1|S, 3G8T|1|P(16) 3G9C|1|Q, 3G8S|1|R, 3G9C|1|S, 3G96|1|P, 3L3C|1|Q, 3G96|1|R, 3L3C|1|S, 3G9C|1|P, 3G8S|1|Q, 3G9C|1|R, 3G8S|1|S, 3L3C|1|P, 3G96|1|Q, 3L3C|1|R, 3G96|1|S, 3G8S|1|P(0)

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLengthNAKB_NA_annotationNAKB_protein_annotation
13G8T|1|QTitle: Crystal structure of the G33A mutant Bacillus anthracis glmS ribozyme bound to GlcN6PX-RAY DIFFRACTION3140
23G9C|1|QTitle: Crystal structure of the product Bacillus anthracis glmS ribozymeX-RAY DIFFRACTION2.9140
33G8S|1|QTitle: Crystal structure of the pre-cleaved Bacillus anthracis glmS ribozymeX-RAY DIFFRACTION3.1140
43G96|1|RTitle: Crystal structure of the Bacillus anthracis glmS ribozyme bound to MaN6PX-RAY DIFFRACTION3.01140
53G96|1|QTitle: Crystal structure of the Bacillus anthracis glmS ribozyme bound to MaN6PX-RAY DIFFRACTION3.01140
62NZ4|1|QTitle: Structural investigation of the GlmS ribozyme bound to its catalytic cofactorX-RAY DIFFRACTION2.5140
73L3C|1|QTitle: Crystal structure of the Bacillus anthracis glmS ribozyme bound to Glc6PX-RAY DIFFRACTION2.85140
82NZ4|1|RTitle: Structural investigation of the GlmS ribozyme bound to its catalytic cofactorX-RAY DIFFRACTION2.5140
93L3C|1|RTitle: Crystal structure of the Bacillus anthracis glmS ribozyme bound to Glc6PX-RAY DIFFRACTION2.85140
103G8S|1|RTitle: Crystal structure of the pre-cleaved Bacillus anthracis glmS ribozymeX-RAY DIFFRACTION3.1140
113G9C|1|RTitle: Crystal structure of the product Bacillus anthracis glmS ribozymeX-RAY DIFFRACTION2.9140
123G9C|1|STitle: Crystal structure of the product Bacillus anthracis glmS ribozymeX-RAY DIFFRACTION2.9139
133G9C|1|PTitle: Crystal structure of the product Bacillus anthracis glmS ribozymeX-RAY DIFFRACTION2.9139
143G96|1|STitle: Crystal structure of the Bacillus anthracis glmS ribozyme bound to MaN6PX-RAY DIFFRACTION3.01140
152NZ4|1|STitle: Structural investigation of the GlmS ribozyme bound to its catalytic cofactorX-RAY DIFFRACTION2.5140
162NZ4|1|PTitle: Structural investigation of the GlmS ribozyme bound to its catalytic cofactorX-RAY DIFFRACTION2.5140
173L3C|1|STitle: Crystal structure of the Bacillus anthracis glmS ribozyme bound to Glc6PX-RAY DIFFRACTION2.85140
183L3C|1|PTitle: Crystal structure of the Bacillus anthracis glmS ribozyme bound to Glc6PX-RAY DIFFRACTION2.85140
193G96|1|PTitle: Crystal structure of the Bacillus anthracis glmS ribozyme bound to MaN6PX-RAY DIFFRACTION3.01140
203G8S|1|STitle: Crystal structure of the pre-cleaved Bacillus anthracis glmS ribozymeX-RAY DIFFRACTION3.1140
213G8S|1|PTitle: Crystal structure of the pre-cleaved Bacillus anthracis glmS ribozymeX-RAY DIFFRACTION3.1140
223G8T|1|RTitle: Crystal structure of the G33A mutant Bacillus anthracis glmS ribozyme bound to GlcN6PX-RAY DIFFRACTION3140
233G8T|1|STitle: Crystal structure of the G33A mutant Bacillus anthracis glmS ribozyme bound to GlcN6PX-RAY DIFFRACTION3140
243G8T|1|PTitle: Crystal structure of the G33A mutant Bacillus anthracis glmS ribozyme bound to GlcN6PX-RAY DIFFRACTION3140

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