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Equivalence class NR_4.0_01076.1 Obsolete

#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. ÅDate
15F9F|1|L (rep)RNA (5'-R(*GP*AP*AP*UP*AP*UP*AP*AP*UP*AP*GP*UP*GP*AP*UP*AP*UP*UP*AP*UP*AP*UP*UP*C)-3')synthetic constructSyntheticCrystal structure of RIG-I helicase-RD in complex with 24-mer blunt-end hairpin RNAX-ray diffraction2.62016-01-13
25F9F|1|BRNA (5'-R(*GP*AP*AP*UP*AP*UP*AP*AP*UP*AP*GP*UP*GP*AP*UP*AP*UP*UP*AP*UP*AP*UP*UP*C)-3')synthetic constructSyntheticCrystal structure of RIG-I helicase-RD in complex with 24-mer blunt-end hairpin RNAX-ray diffraction2.62016-01-13
35F98|1|BRNA (5'-R(P*GP*AP*AP*UP*AP*UP*AP*AP*UP*AP*GP*UP*GP*AP*UP*AP*UP*UP*AP*UP*AP*UP*UP*C)-3')synthetic constructSyntheticCrystal structure of RIG-I in complex with Cap-0 RNAX-ray diffraction3.282016-01-13
45F98|1|DRNA (5'-R(P*GP*AP*AP*UP*AP*UP*AP*AP*UP*AP*GP*UP*GP*AP*UP*AP*UP*UP*AP*UP*AP*UP*UP*C)-3')synthetic constructSyntheticCrystal structure of RIG-I in complex with Cap-0 RNAX-ray diffraction3.282016-01-13
55F9F|1|DRNA (5'-R(*GP*AP*AP*UP*AP*UP*AP*AP*UP*AP*GP*UP*GP*AP*UP*AP*UP*UP*AP*UP*AP*UP*UP*C)-3')synthetic constructSyntheticCrystal structure of RIG-I helicase-RD in complex with 24-mer blunt-end hairpin RNAX-ray diffraction2.62016-01-13
65F98|1|FRNA (5'-R(P*GP*AP*AP*UP*AP*UP*AP*AP*UP*AP*GP*UP*GP*AP*UP*AP*UP*UP*AP*UP*AP*UP*UP*C)-3')synthetic constructSyntheticCrystal structure of RIG-I in complex with Cap-0 RNAX-ray diffraction3.282016-01-13
75F9F|1|FRNA (5'-R(*GP*AP*AP*UP*AP*UP*AP*AP*UP*AP*GP*UP*GP*AP*UP*AP*UP*UP*AP*UP*AP*UP*UP*C)-3')synthetic constructSyntheticCrystal structure of RIG-I helicase-RD in complex with 24-mer blunt-end hairpin RNAX-ray diffraction2.62016-01-13
85F9F|1|HRNA (5'-R(*GP*AP*AP*UP*AP*UP*AP*AP*UP*AP*GP*UP*GP*AP*UP*AP*UP*UP*AP*UP*AP*UP*UP*C)-3')synthetic constructSyntheticCrystal structure of RIG-I helicase-RD in complex with 24-mer blunt-end hairpin RNAX-ray diffraction2.62016-01-13
95F98|1|HRNA (5'-R(P*GP*AP*AP*UP*AP*UP*AP*AP*UP*AP*GP*UP*GP*AP*UP*AP*UP*UP*AP*UP*AP*UP*UP*C)-3')synthetic constructSyntheticCrystal structure of RIG-I in complex with Cap-0 RNAX-ray diffraction3.282016-01-13
105F98|1|JRNA (5'-R(P*GP*AP*AP*UP*AP*UP*AP*AP*UP*AP*GP*UP*GP*AP*UP*AP*UP*UP*AP*UP*AP*UP*UP*C)-3')synthetic constructSyntheticCrystal structure of RIG-I in complex with Cap-0 RNAX-ray diffraction3.282016-01-13
115F9F|1|JRNA (5'-R(*GP*AP*AP*UP*AP*UP*AP*AP*UP*AP*GP*UP*GP*AP*UP*AP*UP*UP*AP*UP*AP*UP*UP*C)-3')synthetic constructSyntheticCrystal structure of RIG-I helicase-RD in complex with 24-mer blunt-end hairpin RNAX-ray diffraction2.62016-01-13
125F98|1|LRNA (5'-R(P*GP*AP*AP*UP*AP*UP*AP*AP*UP*AP*GP*UP*GP*AP*UP*AP*UP*UP*AP*UP*AP*UP*UP*C)-3')synthetic constructSyntheticCrystal structure of RIG-I in complex with Cap-0 RNAX-ray diffraction3.282016-01-13

Release history

Release3.04.05.0
Date2016-07-252016-07-252016-07-25

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child
NR_4.0_01076.1NR_4.0_65214.16.0(6) 5F9F|1|F, 5F9F|1|B, 5F9F|1|D, 5F9F|1|H, 5F9F|1|J, 5F9F|1|L(6) 5F98|1|B, 5F98|1|J, 5F98|1|F, 5F98|1|H, 5F98|1|D, 5F98|1|L(6) 5F9H|1|L, 5F9H|1|B, 5F9H|1|D, 5F9H|1|F, 5F9H|1|H, 5F9H|1|J

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLengthNAKB_NA_annotationNAKB_protein_annotation
15F98|1|BTitle: Crystal structure of RIG-I in complex with Cap-0 RNAX-RAY DIFFRACTION3.2824
25F9F|1|HTitle: Crystal structure of RIG-I helicase-RD in complex with 24-mer blunt-end hairpin RNAX-RAY DIFFRACTION2.624
35F9F|1|LTitle: Crystal structure of RIG-I helicase-RD in complex with 24-mer blunt-end hairpin RNAX-RAY DIFFRACTION2.624
45F9F|1|FTitle: Crystal structure of RIG-I helicase-RD in complex with 24-mer blunt-end hairpin RNAX-RAY DIFFRACTION2.624
55F9F|1|BTitle: Crystal structure of RIG-I helicase-RD in complex with 24-mer blunt-end hairpin RNAX-RAY DIFFRACTION2.624
65F9F|1|JTitle: Crystal structure of RIG-I helicase-RD in complex with 24-mer blunt-end hairpin RNAX-RAY DIFFRACTION2.624
75F9F|1|DTitle: Crystal structure of RIG-I helicase-RD in complex with 24-mer blunt-end hairpin RNAX-RAY DIFFRACTION2.624
85F98|1|HTitle: Crystal structure of RIG-I in complex with Cap-0 RNAX-RAY DIFFRACTION3.2824
95F98|1|DTitle: Crystal structure of RIG-I in complex with Cap-0 RNAX-RAY DIFFRACTION3.2824
105F98|1|FTitle: Crystal structure of RIG-I in complex with Cap-0 RNAX-RAY DIFFRACTION3.2824
115F98|1|LTitle: Crystal structure of RIG-I in complex with Cap-0 RNAX-RAY DIFFRACTION3.2824
125F98|1|JTitle: Crystal structure of RIG-I in complex with Cap-0 RNAX-RAY DIFFRACTION3.2824

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