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Equivalence class NR_2.5_98151.2 Obsolete

#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. ÅDate
13MXH|1|R (rep)Cyclic di-GMP-I riboswitchc-di-GMP riboswitchRF01051Native structure of a c-di-GMP riboswitch from V. choleraeX-ray diffraction2.32010-08-25
24YB1|1|RCyclic di-GMP-I riboswitchRNA (91-MER)Vibrio choleraeBacteriaRF0105120A Mutant c-di-GMP Vc2 Riboswitch bound with 3',3'-cGAMPX-ray diffraction2.082015-04-15

Release history

Release3.0
Date2016-07-25

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent
NR_2.5_98151.2NR_all_98151.13.0(1) 3MXH|1|R(1) 4YB1|1|R(11) 3IRW|1|R, 3IWN|1|A, 3IWN|1|B, 3MUM|1|R, 3MUR|1|R, 3MUT|1|R, 3MUV|1|R, 3UCU|1|R, 3UCZ|1|R, 3UD3|1|R, 3UD4|1|R

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLengthNAKB_NA_annotationNAKB_protein_annotation
13MXH|1|RTitle: Native structure of a c-di-GMP riboswitch from V. choleraeX-RAY DIFFRACTION2.391
24YB1|1|RTitle: 20A Mutant c-di-GMP Vc2 Riboswitch bound with 3',3'-cGAMPX-RAY DIFFRACTION2.0891

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