Equivalence class NR_2.5_72176.1 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 4V9F|1|9 (rep) | 5S ribosomal RNA | 5S Ribosomal RNA | Haloarcula marismortui | Archaea | RF00001 | The re-refined crystal structure of the Haloarcula marismortui large ribosomal subunit at 2.4 Angstrom resolution: more complete structure of the L7/L12 and L1 stalk, L5 and LX proteins | X-ray diffraction | 2.4 | 2014-07-09 |
| 2 | 1S72|1|9 | 5S ribosomal RNA | 5S ribosomal RNA | Haloarcula marismortui | Archaea | RF00001 | REFINED CRYSTAL STRUCTURE OF THE HALOARCULA MARISMORTUI LARGE RIBOSOMAL SUBUNIT AT 2.4 ANGSTROM RESOLUTION | X-ray diffraction | 2.4 | 2004-06-15 |
| 3 | 1JJ2|1|9 | 5S ribosomal RNA | 5S RRNA | Haloarcula marismortui | Archaea | RF00001 | Fully Refined Crystal Structure of the Haloarcula marismortui Large Ribosomal Subunit at 2.4 Angstrom Resolution | X-ray diffraction | 2.4 | 2001-08-01 |
| 4 | 1YHQ|1|9 | 5S ribosomal RNA | 5S Ribosomal RNA | Haloarcula marismortui | Archaea | RF00001 | Crystal Structure Of Azithromycin Bound To The G2099A Mutant 50S Ribosomal Subunit Of Haloarcula Marismortui | X-ray diffraction | 2.4 | 2005-04-26 |
| 5 | 3CC2|1|9 | 5S ribosomal RNA | 5S RIBOSOMAL RNA | Haloarcula marismortui | Archaea | RF00001 | The Refined Crystal Structure of the Haloarcula Marismortui Large Ribosomal Subunit at 2.4 Angstrom Resolution with rrnA Sequence for the 23S rRNA and Genome-derived Sequences for r-Proteins | X-ray diffraction | 2.4 | 2008-05-20 |
| 6 | 1VQ8|1|9 | 5S ribosomal RNA | 5S ribosomal RNA | Haloarcula marismortui | Archaea | RF00001 | The structure of CCDA-PHE-CAP-BIO and the antibiotic sparsomycin bound to the large ribosomal subunit of haloarcula marismortui | X-ray diffraction | 2.2 | 2005-11-29 |
| 7 | 1VQO|1|9 | 5S ribosomal RNA | 5S ribosomal RNA | Haloarcula marismortui | Archaea | RF00001 | The structure of CCPMN bound to the large ribosomal subunit haloarcula marismortui | X-ray diffraction | 2.2 | 2005-11-29 |
| 8 | 1VQM|1|9 | 5S ribosomal RNA | 5S ribosomal RNA | Haloarcula marismortui | Archaea | RF00001 | The structure of the transition state analogue 'DAN' bound to the large ribosomal subunit of haloarcula marismortui | X-ray diffraction | 2.3 | 2005-11-29 |
| 9 | 1VQK|1|9 | 5S ribosomal RNA | 5S ribosomal RNA | Haloarcula marismortui | Archaea | RF00001 | The structure of CCDA-PHE-CAP-BIO bound to the a site of the ribosomal subunit of haloarcula marismortui | X-ray diffraction | 2.3 | 2005-11-29 |
| 10 | 1VQL|1|9 | 5S ribosomal RNA | 5S ribosomal RNA | Haloarcula marismortui | Archaea | RF00001 | The structure of the transition state analogue 'DCSN' bound to the large ribosomal subunit of haloarcula marismortui | X-ray diffraction | 2.3 | 2005-11-29 |
| 11 | 1VQ9|1|9 | 5S ribosomal RNA | 5S ribosomal RNA | Haloarcula marismortui | Archaea | RF00001 | The structure of CCA-PHE-CAP-BIO and the antibiotic sparsomycin bound to the large ribosomal subunit of haloarcula marismortui | X-ray diffraction | 2.4 | 2005-11-29 |
| 12 | 1VQP|1|9 | 5S ribosomal RNA | 5S ribosomal RNA | Haloarcula marismortui | Archaea | RF00001 | The structure of the transition state analogue 'RAP' bound to the large ribosomal subunit of haloarcula marismortui | X-ray diffraction | 2.25 | 2005-11-29 |
| 13 | 1VQ7|1|9 | 5S ribosomal RNA | 5S ribosomal RNA | Haloarcula marismortui | Archaea | RF00001 | The structure of the transition state analogue 'DCA' bound to the large ribosomal subunit of haloarcula marismortui | X-ray diffraction | 2.5 | 2005-11-29 |
| 14 | 1VQN|1|9 | 5S ribosomal RNA | 5S ribosomal RNA | Haloarcula marismortui | Archaea | RF00001 | The structure of CC-HPMN AND CCA-PHE-CAP-BIO bound to the large ribosomal subunit of haloarcula marismortui | X-ray diffraction | 2.4 | 2005-11-29 |
| 15 | 1FFK|1|9 | 5S ribosomal RNA | 5S RRNA | Haloarcula marismortui | Archaea | RF00001 | CRYSTAL STRUCTURE OF THE LARGE RIBOSOMAL SUBUNIT FROM HALOARCULA MARISMORTUI AT 2.4 ANGSTROM RESOLUTION | X-ray diffraction | 2.4 | 2000-08-14 |
Release history
Parents
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length | NAKB_NA_annotation | NAKB_protein_annotation |
|---|---|---|---|---|---|---|---|
| 1 | 1JJ2|1|9 | Title: Fully Refined Crystal Structure of the Haloarcula marismortui Large Ribosomal Subunit at 2.4 Angstrom Resolution | X-RAY DIFFRACTION | 2.4 | 122 | ||
| 2 | 1S72|1|9 | Title: REFINED CRYSTAL STRUCTURE OF THE HALOARCULA MARISMORTUI LARGE RIBOSOMAL SUBUNIT AT 2.4 ANGSTROM RESOLUTION | X-RAY DIFFRACTION | 2.4 | 122 | ||
| 3 | 1VQ7|1|9 | Title: The structure of the transition state analogue 'DCA' bound to the large ribosomal subunit of haloarcula marismortui | X-RAY DIFFRACTION | 2.5 | 122 | ||
| 4 | 3CC2|1|9 | Title: The Refined Crystal Structure of the Haloarcula Marismortui Large Ribosomal Subunit at 2.4 Angstrom Resolution with rrnA Sequence for the 23S rRNA and Genome-derived Sequences for r-Proteins | X-RAY DIFFRACTION | 2.4 | 122 | ||
| 5 | 1YHQ|1|9 | Title: Crystal Structure Of Azithromycin Bound To The G2099A Mutant 50S Ribosomal Subunit Of Haloarcula Marismortui | X-RAY DIFFRACTION | 2.4 | 122 | ||
| 6 | 1VQO|1|9 | Title: The structure of CCPMN bound to the large ribosomal subunit haloarcula marismortui | X-RAY DIFFRACTION | 2.2 | 122 | ||
| 7 | 1VQK|1|9 | Title: The structure of CCDA-PHE-CAP-BIO bound to the a site of the ribosomal subunit of haloarcula marismortui | X-RAY DIFFRACTION | 2.3 | 122 | ||
| 8 | 1VQ8|1|9 | Title: The structure of CCDA-PHE-CAP-BIO and the antibiotic sparsomycin bound to the large ribosomal subunit of haloarcula marismortui | X-RAY DIFFRACTION | 2.2 | 122 | ||
| 9 | 1VQ9|1|9 | Title: The structure of CCA-PHE-CAP-BIO and the antibiotic sparsomycin bound to the large ribosomal subunit of haloarcula marismortui | X-RAY DIFFRACTION | 2.4 | 122 | ||
| 10 | 1VQN|1|9 | Title: The structure of CC-HPMN AND CCA-PHE-CAP-BIO bound to the large ribosomal subunit of haloarcula marismortui | X-RAY DIFFRACTION | 2.4 | 122 | ||
| 11 | 1VQM|1|9 | Title: The structure of the transition state analogue 'DAN' bound to the large ribosomal subunit of haloarcula marismortui | X-RAY DIFFRACTION | 2.3 | 122 | ||
| 12 | 1VQL|1|9 | Title: The structure of the transition state analogue 'DCSN' bound to the large ribosomal subunit of haloarcula marismortui | X-RAY DIFFRACTION | 2.3 | 122 | ||
| 13 | 1VQP|1|9 | Title: The structure of the transition state analogue 'RAP' bound to the large ribosomal subunit of haloarcula marismortui | X-RAY DIFFRACTION | 2.25 | 122 | ||
| 14 | 1FFK|1|9 | Title: CRYSTAL STRUCTURE OF THE LARGE RIBOSOMAL SUBUNIT FROM HALOARCULA MARISMORTUI AT 2.4 ANGSTROM RESOLUTION | X-RAY DIFFRACTION | 2.4 | 122 | ||
| 15 | 4V9F|1|9 | Title: The re-refined crystal structure of the Haloarcula marismortui large ribosomal subunit at 2.4 Angstrom resolution: more complete structure of the L7/L12 and L1 stalk, L5 and LX proteins | X-RAY DIFFRACTION | 2.4 | 122 |
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