Equivalence class NR_all_98947.1 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 2LPT|1|A (rep) | RNA_(34-MER) | Molecular dynamics re-refinement of domain 5 of the Pylaiella littoralis group II intron | Solution NMR | 2012-08-08 | |||||
| 2 | 2F88|1|A | D5-PL RNA RIBOZYME DOMAIN | Solution NMR structure of domain 5 from the Pyaiella littoralis (PL) group II intron | Solution NMR | 2006-02-28 | |||||
| 3 | 1R2P|9|A | Group II catalytic intron | 34-MER | RF00029 | Solution structure of domain 5 from the ai5(gamma) group II intron | Solution NMR | 2004-02-03 | |||
| 4 | 2LPS|1|A | Group II catalytic intron | RNA (34-MER) | RF00029 | Molecular dynamics re-refinement of domain 5 of the yeast ai5(gamma) group II intron | Solution NMR | 2012-08-08 |
Release history
| Release | 2.0 |
|---|---|
| Date | 2014-12-05 |
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
|---|
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length | NAKB_NA_annotation | NAKB_protein_annotation |
|---|---|---|---|---|---|---|---|
| 1 | 2F88|1|A | Title: Solution NMR structure of domain 5 from the Pyaiella littoralis (PL) group II intron | SOLUTION NMR | 34 | |||
| 2 | 2LPT|1|A | Title: Molecular dynamics re-refinement of domain 5 of the Pylaiella littoralis group II intron | SOLUTION NMR | 34 | |||
| 3 | 2LPS|1|A | Title: Molecular dynamics re-refinement of domain 5 of the yeast ai5(gamma) group II intron | SOLUTION NMR | 34 | |||
| 4 | 1R2P|9|A | Title: Solution structure of domain 5 from the ai5(gamma) group II intron | SOLUTION NMR | 34 |
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