Equivalence class NR_all_90487.1 Obsolete
# | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
---|---|---|---|---|---|---|---|---|---|---|
1 | 3AL0|1|E (rep) | Transfer RNA | tRNAGln | synthetic construct | Synthetic | RF00005 | Crystal structure of the glutamine transamidosome from Thermotoga maritima in the glutamylation state. | X-ray diffraction | 3.37 | 2010-09-29 |
2 | 3AKZ|1|G | Transfer RNA | tRNAGln | RF00005 | Crystal structure of Thermotoga maritima nondiscriminating glutamyl-tRNA synthetase in complex with tRNAGln and a glutamyl-AMP analog | X-ray diffraction | 2.9 | 2010-09-29 | ||
3 | 3AKZ|1|H | Transfer RNA | tRNAGln | RF00005 | Crystal structure of Thermotoga maritima nondiscriminating glutamyl-tRNA synthetase in complex with tRNAGln and a glutamyl-AMP analog | X-ray diffraction | 2.9 | 2010-09-29 | ||
4 | 3AKZ|1|F | Transfer RNA | tRNAGln | RF00005 | Crystal structure of Thermotoga maritima nondiscriminating glutamyl-tRNA synthetase in complex with tRNAGln and a glutamyl-AMP analog | X-ray diffraction | 2.9 | 2010-09-29 | ||
5 | 3AKZ|1|E | Transfer RNA | tRNAGln | RF00005 | Crystal structure of Thermotoga maritima nondiscriminating glutamyl-tRNA synthetase in complex with tRNAGln and a glutamyl-AMP analog | X-ray diffraction | 2.9 | 2010-09-29 |
Release history
Release | 2.0 |
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Date | 2014-12-05 |
Parents
This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
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Children
This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
---|---|---|---|---|---|
NR_all_90487.1 | NR_20.0_05991.1 | 3.0 | (5) 3AKZ|1|F, 3AKZ|1|G, 3AL0|1|E, 3AKZ|1|E, 3AKZ|1|H | (0) | (3) 4YVJ|1|C, 4YVK|1|C, 4YVI|1|C |
NR_all_90487.1 | NR_3.0_05991.1 | 3.0 | (4) 3AKZ|1|E, 3AKZ|1|G, 3AKZ|1|F, 3AKZ|1|H | (1) 3AL0|1|E | (2) 4YVK|1|C, 4YVJ|1|C |
NR_all_90487.1 | NR_3.5_05991.1 | 3.0 | (5) 3AKZ|1|E, 3AKZ|1|F, 3AKZ|1|H, 3AL0|1|E, 3AKZ|1|G | (0) | (3) 4YVJ|1|C, 4YVK|1|C, 4YVI|1|C |
NR_all_90487.1 | NR_4.0_05991.1 | 3.0 | (5) 3AKZ|1|E, 3AKZ|1|G, 3AKZ|1|H, 3AL0|1|E, 3AKZ|1|F | (0) | (3) 4YVK|1|C, 4YVI|1|C, 4YVJ|1|C |
NR_all_90487.1 | NR_all_05991.1 | 3.0 | (5) 3AKZ|1|F, 3AKZ|1|G, 3AKZ|1|H, 3AKZ|1|E, 3AL0|1|E | (0) | (3) 4YVI|1|C, 4YVJ|1|C, 4YVK|1|C |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).#S | PDB | Title | Method | Resolution | Length | NAKB_NA_annotation | NAKB_protein_annotation |
---|---|---|---|---|---|---|---|
1 | 3AL0|1|E | Title: Crystal structure of the glutamine transamidosome from Thermotoga maritima in the glutamylation state. | X-RAY DIFFRACTION | 3.37 | 74 | ||
2 | 3AKZ|1|F | Title: Crystal structure of Thermotoga maritima nondiscriminating glutamyl-tRNA synthetase in complex with tRNAGln and a glutamyl-AMP analog | X-RAY DIFFRACTION | 2.9 | 74 | ||
3 | 3AKZ|1|H | Title: Crystal structure of Thermotoga maritima nondiscriminating glutamyl-tRNA synthetase in complex with tRNAGln and a glutamyl-AMP analog | X-RAY DIFFRACTION | 2.9 | 74 | ||
4 | 3AKZ|1|E | Title: Crystal structure of Thermotoga maritima nondiscriminating glutamyl-tRNA synthetase in complex with tRNAGln and a glutamyl-AMP analog | X-RAY DIFFRACTION | 2.9 | 74 | ||
5 | 3AKZ|1|G | Title: Crystal structure of Thermotoga maritima nondiscriminating glutamyl-tRNA synthetase in complex with tRNAGln and a glutamyl-AMP analog | X-RAY DIFFRACTION | 2.9 | 74 |
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