Equivalence class NR_all_88687.1 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 3IZ4|1|A (rep) | Transfer-messenger RNA | Modified E. coli transfer-messenger RNA | Escherichia coli | Bacteria | RF00023 | Modified E. coli tmRNA in the resume state with the tRNA-like domain in the ribosomal P site interacting with the SmpB | Electron microscopy | 13.6 | 2010-10-20 |
| 2 | 4V6T|1|AV | Transfer-messenger RNA | full length transfer messenger RNA (tmRNA) | Escherichia coli | Bacteria | RF00023 | Structure of the bacterial ribosome complexed by tmRNA-SmpB and EF-G during translocation and MLD-loading | Electron microscopy | 8.3 | 2014-07-09 |
Release history
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
|---|
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
|---|---|---|---|---|---|
| NR_all_88687.1 | NR_all_09695.1 | 9.16 | (1) 3IZ4|1|A | (1) 4V6T|1|AV | (0) |
| NR_all_88687.1 | NR_all_36270.1 | 9.16 | (1) 4V6T|1|AV | (1) 3IZ4|1|A | (0) |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length | NAKB_NA_annotation | NAKB_protein_annotation |
|---|---|---|---|---|---|---|---|
| 1 | 3IZ4|1|A | Title: Modified E. coli tmRNA in the resume state with the tRNA-like domain in the ribosomal P site interacting with the SmpB | ELECTRON MICROSCOPY | 13.6 | 377 | ||
| 2 | 4V6T|1|AV | Title: Structure of the bacterial ribosome complexed by tmRNA-SmpB and EF-G during translocation and MLD-loading | ELECTRON MICROSCOPY | 8.3 | 331 |
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