Equivalence class NR_all_70512.1 Obsolete
# | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
---|---|---|---|---|---|---|---|---|---|---|
1 | 2DD1|1|A+ 2DD1|1|B (rep) | 5'-R(*GP*GP*UP*GP*GP*AP*GP*GP*CP*U)-3', 5'-R(*GP*CP*CP*GP*AP*AP*AP*CP*CP*(P5P))-3' | Three consecutive sheared GA pairs in 5'GGUGGAGGCU/3'PCCAAAGCCG | Solution NMR | 2006-06-13 | |||||
2 | 1XV0|1|A+ 1XV0|1|B | 5'-R(*GP*GP*UP*GP*GP*AP*GP*GP*CP*U)-3', 5'-R(*GP*CP*CP*GP*AP*AP*GP*CP*CP*(P5P)-3' | Solution NMR structure of RNA internal loop with three consecutive sheared GA pairs in 5'GGUGGAGGCU/3'PCCGAAGCCG | Solution NMR | 2004-11-09 |
Parents
This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
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Children
This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
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Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).#S | PDB | Title | Method | Resolution | Length | NAKB_NA_annotation | NAKB_protein_annotation |
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1 | 2DD1|1|A+2DD1|1|B | Title: Three consecutive sheared GA pairs in 5'GGUGGAGGCU/3'PCCAAAGCCG | SOLUTION NMR | 10 | |||
2 | 1XV0|1|A+1XV0|1|B | Title: Solution NMR structure of RNA internal loop with three consecutive sheared GA pairs in 5'GGUGGAGGCU/3'PCCGAAGCCG | SOLUTION NMR | 10 |
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