Equivalence class NR_all_58384.1 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 2RN1|3|A (rep) | RNA (5'-R(P*GP*AP*GP*CP*CP*CP*UP*GP*GP*GP*AP*GP*GP*CP*UP*C)-3'), RNA (5'-R(P*GP*CP*UP*GP*GP*UP*CP*CP*CP*AP*GP*AP*CP*AP*GP*C)-3') | Liquid crystal solution structure of the kissing complex formed by the apical loop of the HIV TAR RNA and a high affinity RNA aptamer optimized by SELEX | Solution NMR | 2008-09-23 | |||||
| 2 | 1KIS|1|A | RNA (5'-R(*GP*AP*GP*CP*CP*CP*UP*GP*GP*GP*AP*GP*GP*CP*UP*C)-3'), RNA (5'-R(*GP*CP*UP*GP*UP*UP*CP*CP*CP*AP*GP*AP*CP*AP*GP*C)-3') | TAR-TAR 'KISSING' HAIRPIN COMPLEX DERIVED FROM THE HIV GENOME, NMR, 1 STRUCTURE | Solution NMR | 1997-10-15 |
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
|---|---|---|---|---|---|
| NR_all_58384.1 | NR_all_53494.1 | 3.0 | (1) 2RN1|3|A | (1) 1KIS|1|A | (0) |
| NR_all_58384.1 | NR_all_83837.1 | 3.0 | (1) 1KIS|1|A | (1) 2RN1|3|A | (0) |
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
|---|---|---|---|---|---|
| NR_all_58384.1 | NR_all_58324.1 | 5.0 | (1) 1KIS|1|A | (1) 2RN1|3|A | (0) |
| NR_all_58384.1 | NR_all_87817.1 | 5.0 | (1) 2RN1|3|A | (1) 1KIS|1|A | (0) |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length | NAKB_NA_annotation | NAKB_protein_annotation |
|---|---|---|---|---|---|---|---|
| 1 | 2RN1|3|A | Title: Liquid crystal solution structure of the kissing complex formed by the apical loop of the HIV TAR RNA and a high affinity RNA aptamer optimized by SELEX | SOLUTION NMR | 16 | |||
| 2 | 1KIS|1|A | Title: TAR-TAR 'KISSING' HAIRPIN COMPLEX DERIVED FROM THE HIV GENOME, NMR, 1 STRUCTURE | SOLUTION NMR | 16 |
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