Equivalence class NR_all_57293.1 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 5GAN|1|U (rep) | U5 spliceosomal RNA | U5 snRNA | Saccharomyces cerevisiae | Eukarya | RF00020 | The overall structure of the yeast spliceosomal U4/U6.U5 tri-snRNP at 3.7 Angstrom | Electron microscopy | 3.7 | 2016-01-27 |
| 2 | 5GAM|1|U | U5 spliceosomal RNA | U5 snRNA | Saccharomyces cerevisiae | Eukarya | RF00020 | Foot region of the yeast spliceosomal U4/U6.U5 tri-snRNP | Electron microscopy | 3.7 | 2016-02-03 |
| 3 | 5GAP|1|U | U5 spliceosomal RNA | U5 snRNA | Saccharomyces cerevisiae | Eukarya | RF00020 | Body region of the U4/U6.U5 tri-snRNP | Electron microscopy | 3.6 | 2016-01-27 |
Release history
| Release | 3.0 |
|---|---|
| Date | 2016-07-25 |
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
|---|
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
|---|---|---|---|---|---|
| NR_all_57293.1 | NR_20.0_57293.2 | 4.0 | (3) 5GAP|1|U, 5GAN|1|U, 5GAM|1|U | (0) | (1) 3JCM|1|F |
| NR_all_57293.1 | NR_4.0_57293.2 | 4.0 | (3) 5GAP|1|U, 5GAN|1|U, 5GAM|1|U | (0) | (1) 3JCM|1|F |
| NR_all_57293.1 | NR_all_57293.2 | 4.0 | (3) 5GAP|1|U, 5GAN|1|U, 5GAM|1|U | (0) | (1) 3JCM|1|F |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length | NAKB_NA_annotation | NAKB_protein_annotation |
|---|---|---|---|---|---|---|---|
| 1 | 5GAM|1|U | Title: Foot region of the yeast spliceosomal U4/U6.U5 tri-snRNP | ELECTRON MICROSCOPY | 3.7 | 141 | ||
| 2 | 5GAN|1|U | Title: The overall structure of the yeast spliceosomal U4/U6.U5 tri-snRNP at 3.7 Angstrom | ELECTRON MICROSCOPY | 3.7 | 141 | ||
| 3 | 5GAP|1|U | Title: Body region of the U4/U6.U5 tri-snRNP | ELECTRON MICROSCOPY | 3.6 | 20 |
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