Equivalence class NR_all_54051.1 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 1MV2|1|A (rep) | 5'-R(*GP*GP*CP*AP*(P5P)P*GP*CP*CP*U)-3' | The tandem, Face-to-Face AP Pairs in 5'(rGGCAPGCCU)2 | Solution NMR | 2002-12-18 | |||||
| 2 | 1MUV|1|A | 5'-R(*GP*GP*CP*AP*AP*GP*CP*CP*U)-3' | Sheared A(anti)-A(anti) Base Pairs in a Destabilizing 2x2 Internal Loop: The NMR Structure of 5'(rGGCAAGCCU)2 | Solution NMR | 2002-12-18 | |||||
| 3 | 1MV1|1|A | 5'-R(*GP*GP*CP*(P5P)P*AP*GP*CP*CP*U)-3' | The Tandem, Sheared PA Pairs in 5'(rGGCPAGCCU)2 | Solution NMR | 2002-12-18 | |||||
| 4 | 1MV6|1|A | 5'-R(*GP*GP*CP*(P5P)P*(P5P)P*GP*CP*CP*U)-3' | The tandem, Sheared PP Pairs in 5'(rGGCPPGCCU)2 | Solution NMR | 2002-12-18 |
Release history
| Release | 2.0 |
|---|---|
| Date | 2014-12-05 |
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
|---|
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
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Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length | NAKB_NA_annotation | NAKB_protein_annotation |
|---|---|---|---|---|---|---|---|
| 1 | 1MV6|1|A | Title: The tandem, Sheared PP Pairs in 5'(rGGCPPGCCU)2 | SOLUTION NMR | 7 | |||
| 2 | 1MV2|1|A | Title: The tandem, Face-to-Face AP Pairs in 5'(rGGCAPGCCU)2 | SOLUTION NMR | 8 | |||
| 3 | 1MV1|1|A | Title: The Tandem, Sheared PA Pairs in 5'(rGGCPAGCCU)2 | SOLUTION NMR | 8 | |||
| 4 | 1MUV|1|A | Title: Sheared A(anti)-A(anti) Base Pairs in a Destabilizing 2x2 Internal Loop: The NMR Structure of 5'(rGGCAAGCCU)2 | SOLUTION NMR | 9 |
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