NR_all_52104.1

Members (3)
History
Heat map

#	IFE	Standardized name	Molecule	Rfam	Title	Method	Date
1	2D1B\|1\|A (rep)	HIV-1 dimerisation initiation site	RNA	RF00175	Solution RNA structure model of the HIV-1 dimerization initiation site in the kissing-loop dimer	Solution NMR	2005-11-01
2	2D1B\|1\|B	HIV-1 dimerisation initiation site	RNA	RF00175	Solution RNA structure model of the HIV-1 dimerization initiation site in the kissing-loop dimer	Solution NMR	2005-11-01
3	2D1A\|1\|A	HIV-1 dimerisation initiation site	RNA	RF00175	Solution RNA structure model of the HIV-1 dimerization initiation site in the extended-duplex dimer	Solution NMR	2005-11-01

Release history

Release	2.0
Date	2014-12-05

Parents

This class	Parent classes	Release id	Intersection	Added to this class	Only in parent

Children

This class	Descendant classes	Release id	Intersection	Only in this class	Added to child
NR_all_52104.1	NR_all_52104.2	3.0	(2) 2D1B\|1\|B, 2D1B\|1\|A	(1) 2D1A\|1\|A	(1) 2D1A\|1\|A+2D1A\|1\|B

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).

#S	PDB	Title	Method	Length
1	2D1B\|1\|A	Title: Solution RNA structure model of the HIV-1 dimerization initiation site in the kissing-loop dimer	SOLUTION NMR	39
2	2D1B\|1\|B	Title: Solution RNA structure model of the HIV-1 dimerization initiation site in the kissing-loop dimer	SOLUTION NMR	39
3	2D1A\|1\|A	Title: Solution RNA structure model of the HIV-1 dimerization initiation site in the extended-duplex dimer	SOLUTION NMR	39

Coloring options: Nucleotide numbers

Equivalence class NR_all_52104.1 Obsolete

Release history

Parents

Children